Publications based in whole or in part on research carried out at Lizard Island Research Station are listed here. Also included is the output of research conducted on the Great Barrier Reef at locations other than Lizard Island that has been funded by the Lizard Island Reef Research Foundation.


2019 LIRS publications: 76

Allen, J.D., E.L. Richardson, D. Deaker, A. Agüera and M. Byrne, 2019. Larval cloning in the crown-of-thorns sea star, a keystone coral predator. Marine Ecology Progress Series, 609: 271-276.

Alvarez Noriega, M., 2019. Competition and coexistence of reef-corals. PhD thesis, James Cook University

Arroyo, F.A., T.E. Pawlowska, J.H. Choat, K.D. Clements and E.R. Angert, 2019. Recombination contributes to population diversification in the polyploid intestinal symbiont Epulopiscium sp. type B. The ISME Journal, 13: 1084–1097.

Branconi, R., J.G. Garner, P.M. Buston and M.Y.L. Wong, 2019. A new non-invasive technique for temporarily tagging coral reef fishes. Copeia, 107(1): 85–91.

Branconi, R., M.Y.L. Wong and P.M. Buston, 2019. Comparison of efficiency of direct observations by scuba diver and indirect observations via video camera for measuring reef‐fish behaviour. Journal of Fish Biology, 94(3): 489-497.

Brandl, S.J., L. Tornabene, C.H.R. Goatley, J.M. Casey, R.A. Morais, I.M. Cote, C.C. Baldwin, V. Parravicini, N.M.D. Schiettekatte and D.R. Bellwood , 2019. Demographic dynamics of the smallest marine vertebrates fuel coral-reef ecosystem functioning. Science, 10.1126/science.aav3384.

Bray, R.A., S.C. Cutmore and T.H. Cribb, 2019. An anomalous phylogenetic position for Deraiotrema platacis Machida, 1982 (Lepocreadiidae) from Platax pinnatus on the Great Barrier Reef. Diversity, 11: 104.

Chase, T.J. and M.O. Hoogenboom, 2019. Differential occupation of available coral hosts by coral-dwelling damselfish (Pomacentridae) on Australia’s Great Barrier Reef. Diversity, 11: 219.

Cheney, K.L., N.F. Green, A.P. Vibert, M. Vorobyev, N.J. Marshall, D.C. Osorio and J.A. Endler, 2019. An Ishihara-style test of animal colour vision. Journal of Experimental Biology, 222: jeb189787.

Chivers, D.P., M.I. McCormick, E.P. Fakan, R.P. Barry, J.W. Edmiston and M.C.O. Ferrari, 2019. Coral degradation alters predator odour signatures and influences prey learning and survival. Proceedings of the Royal Society B, 286: 20190562.

Clements, M., K. Wolfe, K. Schwartz and M. Byrne, 2019. Forever fissiparous: asexual propagation and stable demography in a tropical and geographically isolated asterinid sea star. Marine Biology, 166: 69.

Cribb, T.H., P.A. Chapman, S.C. Cutmore and D.C. Huston, 2019. Pronocephaloid cercariae (Platyhelminthes: Trematoda) from gastropods of the Queensland coast, Australia. Journal of Helminthology, 94, e105:1-10.

DeCarlo, T.M., H.B. Harrison, L. Gajdzik, D. Alaguarda, R. Rodolfo-Metalpa, J. D’Olivo, G. Liu, D. Patalwala and M.T. McCulloch, 2019. Acclimatization of massive reef-building corals to consecutive heatwaves. Proceedings of the Royal Society B, 286: 20190235.

Dittmann, I.L., D. Cuadrado, M.T. Aguado, C. Noreña and B. Egger, 2019. Polyclad phylogeny persists to be problematic. Organisms Diversity and Evolution, 19: 585-608.

Duong, B., S.P. Blomberg, T.H. Cribb, P.F. Cowman, A.M. Kuris, M.I. McCormick, R.R. Warner, D. Sun and A.S. Grutter, 2019. Parasites of coral reef fish larvae: its role in the pelagic larval stage. Coral Reefs, https://doi.org/10.1007/s00338-019-01766-z.

Fakan, E.P. and M.I. McCormick, 2019. Boat noise affects the early life history of two damselfishes. Marine Pollution Bulletin, 141: 493-500.

Feller, K., D. Wilby, G. Jacucci, S. Vignolini, J. Mantell, T.J. Wardill, T.W. Cronin and N.W. Roberts, 2019. Long-wavelength reflecting filters found in the larval retinas of one mantis shrimp family (Nannosquillidae). Current Biology, 29: 3101–3108.

Ferrari, M.C.O., D.T. Warren, M.I. McCormick and D.P. Chivers, 2019. The cost of carryover effects in a changing environment: context-dependent benefits of a behavioural phenotype in a coral reef fish. Animal Behaviour, 49: 1-5.

Fontoura, L., K.J A. Zawada, S. D’agata, A.H. Baird, M. Álvarez-Noriega, R.M. Woods, O.J. Luiz, M. Dornelas, J.S. Madin, J.M. Maina and E.M.P. Madin, 2019. Climate-driven shift in coral morphological structure predicts decline of juvenile reef fishes. Global Change Biology, doi: 10.1111/GCB.14911.

Frisch, A.J. and J.R. Rizzari, 2019. Parks for sharks: human exclusion areas outperform no-take marine reserves. Frontiers in Ecology and the Environment, doi:10.1002/fee.2003.

Gordon, T.A.C., A.N. Radford, I.K. Davidson, K. Barnes, K. McCloskey, S.L. Nedelec, M.G. Meekan, M.I. McCormick and S.D. Simpson, 2019. Acoustic enrichment can enhance fish community development on degraded coral reef habitat. Nature Communications, 10: 5414.

Grutter, A.S., S.P. Blomberg, S. Box, R. Bshary, O. Ho, E.M.P. Madin, E.C. McClure, M.G. Meekan, J.M. Murphy, M.A. Richardson, P.C. Sikkel, C.A. Sims, D. Sun and R.R. Warner, 2019. Changes in local free‑living parasite populations in response to cleaner manipulation over 12 years. Oecologia, doi.org/10.1007/s00442-019-04451-8.

Hammond, M.D., T.H. Cribb, M.J. Nolan and N.J. Bott, 2019. Two new species of Prosorhynchoides (Digenea: Bucephalidae) from Tylosurus crocodilus (Belonidae) from the great barrier reef and French Polynesia. Parasitology International, 75: 102005.

Hing, M.L., O.S. Klanten, M.Y.L. Wong and M. Dowton, 2019. Drivers of sociality in Gobiodon fishes: an assessment of phylogeny, ecology and life-history. Molecular Phylogenetics and Evolution, 137: 263–273.

Hughes, T.P., J.T. Kerry, A.H. Baird, S.R. Connolly, T.J. Chase, A. Dietzel, T. Hill, A.S. Hoey, M.O. Hoogenboom, M. Jacobson, A. Kerswell, J.S. Madin, A. Mieog, A.S. Paley, M.S. Pratchett, G. Torda and R.M. Woods, 2019. Global warming impairs stock–recruitment dynamics of corals. Nature, 568: 397-390.

Hughes, T.P., JT. Kerry, S.R. Connolly, A.H. Baird, C.M. Eakin, S.F. Heron, A.S. Hoey, M.O. Hoogenboom, M. Jacobson, G. Liu, M.S. Pratchett, W. Skirving and G. Torda, 2019. Ecological memory modifies the cumulative impact of recurrent climate extremes. Nature Climate Change, 9: 40–43.

Jurriaans, S. and M.O. Hoogenboom, 2019. Thermal performance of scleractinian corals along a latitudinal gradient on the Great Barrier Reef. Philosophical Transactions of the Royal Society B, 374: 201805.

Komyakova, V., P.L. Munday and G.P. Jones, 2019. Comparative analysis of habitat use and ontogenetic habitat-shifts among coral reef damselfishes. Environmental Biology of Fishes, 102: 1201–1218.

Leggat, W.P., E.F. Camp, D.J. Suggett, S.F. Heron, A,J. Fordyce, S. Gardner, L. Deakin, M. Turner, L.J. Beeching, U. Kuzhiumparambil, C.M. Eakin and T.D. Ainsworth, 2019. Rapid coral decay is associated with marine heatwave mortality events on reefs. Current Biology, 29: 2723–2730.

Lin, C., A. Chou and T.W. Cronin, 2019. Optic lobe organization in stomatopod crustacean species possessing different degrees of retinal complexity. Journal of Comparative Physiology A, https://doi.org/10.1007/s00359-019-01387-5.

Liu, S.Y.V., M.-N. Tuanmu, R. Rachmawati, G.N. Mahardika and P.H. Barber, 2019. Integrating phylogeographic and ecological niche approaches to delimitating cryptic lineages in the blue–green damselfish (Chromis viridis). PeerJ, 7: e7384.

Loffler, Z., 2019. The persistence of Sargassum communities on coral reefs: resilience and herbivory. PhD thesis, James Cook University.

Loffler, Z. and A.S. Hoey, 2019. Microtopographic refuges enhance recruitment and survival but inhibit growth of propagules of the tropical macroalga Sargassum swartzii. Marine Ecology Progress Series, 627: 61-70.

Luehrmann, M., K.L. Carleton, F. Cortesi, K.L. Cheney and N.J. Marshall, 2019. Cardinalfishes (Apogonidae) show visual system adaptations typical of nocturnally and diurnally active fish. Molecular Ecology, 28: 3025–3041.

Maldonado, A., J. Nowicki, M.S. Pratchett and D. Schlenk, 2019. Differences in diet and biotransformation enzymes of coral reef butterflyfishes between Australia and Hawaii. Comparative Biochemistry and Physiology Part C: Toxicology and Pharmacology, 216: 109.

Martin, S.B, A.J. Downie and T.H. Cribb, 2019. A new subfamily for a clade of opecoelids (Trematoda: Digenea) exploiting marine fishes as second-intermediate hosts, with the first report of opecoelid metacercariae from an elasmobranch. Zoological Journal of the Linnean Society, 2019, XX, 1–18.

Martin, S.B., 2019. A new subfamily classification hypothesis for the largest family of trematodes, the Opecoelidae Ozaki, 1925. PhD thesis, University of Queensland.

Martin, S.B., D.C. Huston, S.C. Cutmore and T.H. Cribb, 2019. A new classification for deep-sea opecoelid trematodes based on the phylogenetic position of some unusual taxa from shallow-water, herbivorous fishes off south-west Australia. Zoological Journal of the Linnean Society, 186: 385–413.

Martin, S.B., S.C. Cutmore and T.H. Cribb, 2019. The Pseudoplagioporinae, a new subfamily in the Opecoelidae Ozaki, 1925 (Trematoda) for a small clade parasitizing mainly lethrinid fishes, with three new species. Journal of Zoological Systematics and Evolutionary Research, 2019, 00: 1–35.

McClure, E.C., L.E. Richardson, A. Graba-Landry, Z. Loffler, G.R. Russ and A.S. Hoey, 2019. Cross-shelf differences in the response of herbivorous fish assemblages to severe environmental disturbance. Diversity, 11: 23 (13 pages).

McCormick, M.I., E.P. Fakan and M.M. Palacios, 2019. Habitat degradation and predators have independent trait-mediated effects on prey. Scientific Reports, 9: 15705.

McCormick, M.I., E.P. Fakan, S.L. Nedelec and B.J.M. Allan, 2019. Effects of boat noise on fish fast start escape response depends on engine type. Scientific Reports, 9: 6554.

McCormick, M.I., M.C.O. Ferrari, E.P. Fakan, R.P. Barry and D.P. Chivers, 2019. Diet cues and their utility for risk assessment in degraded habitats. Animal Behaviour, 152: 19-28.

McMahon, A., I.R. Santos, K.G. Schulz, A. Scott, J. Silverman, K.L. Davis and D.T. Maher, 2019. Coral reef calcification and production after the 2016 bleaching event at Lizard Island, Great Barrier Reef. Journal of Geophysical Research: Oceans, 124: 4003–4016.

Morais, R.A. and D.R. Bellwood, 2019. Pelagic subsidies underpin fish productivity on a degraded coral reef. Current Biology, 29: 1521-1527.

Musilova, Z., F. Cortesi, M. Matschiner, W.I.L. Davie, J.S. Patel, S.M. Stieb, F. de Busserolles, M. Malmstrøm, O.K. Tørresen, C.J. Brown, J.K. Mountford, R. Hanel, D.L. Stenkamp, K.S. Jakobsen, K.L. Carleton, S. Jentoft, J. Marshall and W. Salzburger, 2019. Vision using multiple distinct rod opsins in deep-sea fishes. Science, 364: 588-592.

Page, T., C. McDougall and G. Diaz-Pulido, 2019. De novo transcriptome assembly for four species of crustose coralline algae and analysis of unique orthologous genes. Scientific Reports, 9: 12611.

Pena, V., L. Le Gall, A. Roesler, C.E. Payri and J.C. Braga, 2019. Adeylithon bosencei gen. et sp. nov. (Corallinales, Rhodophyta): a new reef-building genus with anatomical affinities with the fossil Aethesolithon. Journal of Phycology, 55: 134-145.

Peniston, J.H., E.A. Ellis, C.K.C. Churchill, M.D. Ramirez and T.H. Oakley, 2019. Phylogenetic position of Alternochelata lizardensis Kornicker, 1982 within Rutidermatidae (Ostracoda: Myodocopida), with an investigation into its green coloration. Journal of Crustacean Biology, 39(5): 559–566.

Pisapia, C., E.J. Hochberg and R. Carpenter, 2019. Multi-decadal change in reef-scale production and calcification associated with recent disturbances on a Lizard Island reef flat. Frontiers in Marine Science, 6: 575.

Pratchett, M.S., A.S. Hoey, C.-H. Tan, C.-Y. Kuo, A.G. Bauman, R. Kumaraswamy and A.H. Baird, 2019. Spatial and temporal variation in fecundity of Acropora spp. in the northern Great Barrier Reef. Diversity, 11: 60.

Russell, B.J., H.M Dierssen and E,J. Hochberg, 2019. Water column optical properties of Pacific coral reefs across geomorphic zones and in comparison to offshore waters. Remote Sensing, 11(15): 1757.

Sikkel, P.C., M.A. Richardson, D. Sun, P. Narvaez, W.E. Feeney and A.S. Grutter, 2019. Changes in abundance of fish-parasitic gnathiid isopods associated with warm-water bleaching events on the northern Great Barrier Reef. Coral Reefs, 38: 721–730.

Soares, M.C., R. Mazzei, S.C. Cardoso, C. Ramos and R. Bshary, 2019. Testosterone causes pleiotropic effects on cleanerfish behaviour. Scientific Reports, 9: 15829.

Staubli, V., 2019. Effects of serotonergic system in an interspecific interaction in a marine cleaning system with the cleaner fish, Labroides dimidiatus and its nonpredatory client reef fish, Ctenochaetus striatus. Master Thesis, University of Neuchatel, Switzerland.

Stieb, S.M., F. de Busserolles, K.L. Carleton, F. Cortesi, W.-S. Chung, B.E. Dalton, L.A. Hammond and N.J. Marshall, 2019. A detailed investigation of the visual system and visual ecology of the Barrier Reef anemonefish, Amphiprion akindynos. Scientific Reports, 9: 16459.

Streit, R.P., G.S. Cumming and D.R. Bellwood, 2019. Patchy delivery of functions undermines functional redundancy in a high diversity system. Functional Ecology, DOI: 10.1111/1365-2435.13322.

Taylor, B.M., C.E. Benkwitt, H. Choat, K.D. Clements, N.A.J. Graham and M.G. Meekan, 2019. Synchronous biological feedbacks in parrotfishes associated with pantropical coral bleaching. Global Change Biology, 2019, 00:1-10.

Taylor, B.M., J.H. Choat, E.E. DeMartini, A.S. Hoey, A. Marshell, M.A. Preist, K.L. Rhodes and M.G. Meekan, 2019. Demographic plasticity facilitates ecological and economic resilience in a commercially important reef fish. Journal of Animal Ecology, 88: 1888–1900.

Tebbett, S.B., R.P. Streit and D.R. Bellwood, 2019. A 3D perspective on sediment accumulation in algal turfs: Implications of coral reef flattening. Journal of Ecology, 108: 70-80.

Tebbett, S.B., R.P. Streit and D.R. Bellwood, 2019. Expansion of a colonial ascidian following consecutive mass coral bleaching at Lizard Island, Australia. Marine Environmental Research, 144: 124-129.

Tettamanti, V., F. de Busserolles, D. Lecchini, N.J. Marshall and F. Cortesi, 2019. Visual system development of the spotted unicornfish, Naso brevirostris (Acanthuridae). Journal of Experimental Biology, 222: jeb209916. doi:10.1242/jeb.209916.

Thoen, H.H., G.H. Wolff, J. Marshall, M.E. Sayre and N.J. Strausfeld, 2019. The reniform body: An integrative lateral protocerebral neuropil complex of Eumalacostraca identified in Stomatopoda and Brachyura. Journal of Comparative Neurology, 2019: 1-19.

Thompson, C.A., S. Matthews, A.S. Hoey and M.S. Pratchett, 2019. Changes in sociality of butterflyfishes linked to population declines and coral loss. Coral Reefs, 38: 527–537.

Triki, Z. and R. Bshary, 2019. Fluctuations in coral reef fish densities after environmental disturbances on the northern Great Barrier Reef. PeerJ, 7: e6720.

Triki, Z. and R. Bshary, 2019. Long‐term memory retention in a wild fish species Labroides dimidiatus eleven months after an aversive event. Ethology, 2019, 00: 1-5.

Triki, Z., E. Levorato, W. McNeely, J. Marshall and R. Bshary, 2019. Population densities predict forebrain size variation in the cleaner fish Labroides dimidiatus. Proceedings of the Royal Society B, 286: 20192108.

Triki, Z., S. Wismer, O. Rey, S.A. Binning, E. Levorato and R. Bshary, 2019. Biological market effects predict cleaner fish strategic sophistication. Behavioral Ecology, 30(6): 1548–1557.

Ulm, S., I.J. McNiven, S.J. Aird and A.B.J. Lambrides, 2019. Sustainable harvesting of Conomurex luhuanus and Rochia nilotica by Indigenous Australians on the Great Barrier Reef over the past 2000 years. Journal of Archaeological Science: Reports, 28: 102017.

Warren, D.T. and M.I. McCormick, 2019. Intrageneric differences in the effects of acute temperature exposure on competitive behaviour of damselfishes. PeerJ, 7: e7320.

Wismer, S., S.B. Tebbett, R.P. Streit and D.R. Bellwood, 2019. Spatial mismatch in fish and coral loss following 2016 mass coral bleaching. Science of the Total Environment, 650: 1487–1498.

Wismer, S., S.B. Tebbett, R.P. Streit and D.R. Bellwood, 2019. Young fishes persist despite coral loss on the Great Barrier Reef. Communications Biology, 2: 456.

Wismer, S.C., A.I. Pinto, Z. Triki, A.S. Grutter, D.G. Roche and R. Bshary, 2019. Cue-based decision rules of cleaner fish in a biological market task. Animal Behaviour, 158: 249-260.

Worsaae, K., M.D. Mikkelsen and A. Martinez, 2019. Description of six new species of Mesonerilla (Nerillidae, Annelida) and an emended description of M. intermedia Wilke, 1953, from marine and cave environments. Marine Biodiversity, 49: 2141-2165.

Yong, R.Q.-Y., S.C. Cutmore and T.H. Cribb, 2019. Two new species of Cardicola (Trematoda: Aporocotylidae) from the damselfish Abudefduf whitleyi (Perciformes: Pomacentridae) and the triggerfish Sufflamen chrysopterum (Tetraodontiformes: Balistidae). Marine Biodiversity, doi.org/10.1007/s12526-018-0895-4.

Zawada, K.J.A., J.S. Madin, A.H. Baird, T.C.L. Bridge and M. Dornelas, 2019. Morphological traits can track coral reef responses to the Anthropocene. Functional Ecology, 33: 962-975.


LIRS publications 2018: 83

Abreu, M.S., J.P.M. Messias, A.C.V.V. Giacominic and M.C. Soares, 2018. Estradiol shapes mutualistic behaviour of female cleaner fish (Labroides dimidiatus - Valenciennes, 1839): potential implications of environmental disturbance. Ecotoxicology and Environmental Safety, 157: 244–248.

Álvarez-Campos, P., S. Taboada, G. San Martín, C. Leiva and A. Riesgo, 2018. Phylogenetic relationships and evolution of reproductive modes within flattened syllids (Annelida : Syllidae) with the description of a new genus and six new species. Invertebrate Systematics, 32: 224-251.

Alvarez-Noriega, M., A.H. Baird, M. Dornelas, J.S. Madin and S.R. Connolly, 2018. Negligible effect of competition on coral colony growth. Ecology, 99(6): 1347–1356.

Alvarez-Noriega, M., A.H. Baird, T.C.L. Bridge, M. Dornelas, L. Fontoura, O. Pizarro, K. Precoda, D. Torres-Pulliza, R.M. Woods, K. Zawada and J.S. Madin, 2018. Contrasting patterns of changes in abundance following a bleaching event between juvenile and adult scleractinian corals. Coral Reefs, 37: 527–532.

An, J., M. Zhang and G. Paulay, 2018. New records of Tylokepon with the description of a new species (Epicaridea, Bopyridae, Keponinae. Zookeys, 790: 77-85.

Baird, A.H., M. Álvarez-Noriega, V.R. Cumbo, S.R. Connolly, M. Dornelas and J.S. Madin, 2018. Effects of tropical storms on the demography of reef corals. Marine Ecology Progress Series, 606: 29-38.

Barnett, L.J. and T.L. Miller, 2018. Phenotypic plasticity of six unusual cercariae in nassariid gastropods and their relationships to the Acanthocolpidae and Brachycladiidae (Digenea). Parasitology International, 67: 225-232.

Binning, S.A., D.G. Roche, A.S. Grutter, S. Colosio, D. Sun, J. Miest and R. Bshary, 2018. Cleaner wrasse indirectly affect the cognitive performance of a damselfish through ectoparasite removal. Proceedings of the Royal Society B, 285: 20172447.

Bok, M.J., N.W. Roberts and T.W. Cronin, 2018. Behavioural evidence for polychromatic ultraviolet sensitivity in mantis shrimp. Proceedings of the Royal Society B, 285: 20181384.

Bostrom-Einarsson, L., M.C. Bonin, S. Moon and S. Firth, 2018. Environmental impact monitoring of household vinegar-injections to cull crown-of-thorns starfish, Acanthaster spp. Ocean and Coastal Management, 155: 83-89.

Bray, R.A., S.C. Cutmore and T.H. Cribb, 2018. Lepotrema Ozaki, 1932 (Lepocreadiidae: Digenea) from Indo-Pacific fishes, with the description of eight new species, characterised by morphometric and molecular features. Systematic Parasitology, 95: 693-741.

Carrier, T.J., K. Wolfe, K. Lopez, M. Gall, D.A. Janies, M. Byrne and A.M. Reitzel, 2018. Diet-induced shifts in the crown-of-thorns (Acanthaster sp.) larval microbiome. Marine Biology, 165: 157-164.

Chase, T.J., M. S. Pratchett, G.E. Frank and M.O. Hoogenboom, 2018. Coral-dwelling fish moderate bleaching susceptibility of coral hosts. PLoS ONE 13(12): e0208545.

Chase, T.J., J.P. Nowicki and D.J. Coker, 2018. Diurnal foraging of a wild coral-reef fish Parapercis australis in relation to late-summer temperatures. Journal of Fish Biology, 93: 153–158.

Constant, J., 2018. Revision of the Eurybrachidae XIV. The Australian genera Olonia Stål, 1862 and Stalobrachys gen. nov. (Hemiptera: Fulgoromorpha). European Journal of Taxonomy, 486: 1-97.

Cutmore, S.C., R.A. Bray and T.H. Cribb, 2018. Two new species of Bacciger Nicoll, 1914 (Trematoda: Faustulidae) in species of Herklotsichthys Whitley (Clupeidae) from Queensland waters. Systematic Parasitology, 95: 645–654.

Daneliya, M., W.W. Price and R.W. Heard, 2018. Revision of the Siriella brevicaudata species group (Crustacea: Mysida: Mysidae) from the West Indo-Pacific. European Journal of Taxonomy, 426: 1–80.

Ferrari, M.C.O., M.I. McCormick, M.G. Meekan, S.D. Simpson, S.L. Nedelec and D.P. Chivers, 2018. School is out on noisy reefs: the effect of boat noise on predator learning and survival of juvenile coral reef fishes. Proceedings of the Royal Society B, 285: 20180033.

Fitzpatrick, A., I.J. McNiven, J. Specht and S. Ulm, 2018. Stylistic analysis of stone arrangements supports regional cultural interactions along the northern Great Barrier Reef, Queensland. Australian Archaeology, doi.org/10.1080/03122417.2018.1507807.

Gingins, S., F. Marcadier, S. Wismer, O. Krattinger, F. Quattrini, R. Bshary and S.A. Binning, 2018. The performance of cleaner wrasse, Labroides dimidiatus, in a reversal learning task varies across experimental paradigms. PeerJ, 6: e4745; DOI 10.7717/peerj.4745.

Goatley, C.H.R, S. Wroe, S.B. Tebbett and D.R. Bellwood, 2018. An evaluation of a double-tailed deformity in a coral-reef surgeonfish Acanthurus nigrofuscus (Acanthuridae) using micro-computed tomography. Journal of Fish Biology, 92: 1645–1650.

Gordon, T.A.C., H.R. Harding, K.E. Wong, N.D. Merchant, M.G. Meekan, M.I. McCormick, A.N. Radford and S.D. Simpson, 2018. Habitat degradation negatively affects auditory settlement behavior of coral reef fishes. Proceedings of the National Academy of Science, 115(20): 5193-5198.

Graham, N.A.J., S.K. Wilson, P. Carr, A.S. Hoey, S. Jennings and M.A. MacNeil, 2018. Seabirds enhance coral reef productivity and functioning in the absence of invasive rats. Nature, 559: 250-253.

Green, N.F. H.H. Urquhart, C.P. van den Berg, N.J. Marshall and K.L. Cheney, 2018. Pattern edges improve predator learning of aposematic signals. Behavioral Ecology, 29(6): 1481–1486.

Hedley, T.D., C. Roelfsema, V. Brando, C. Giardino, T. Kutser,S. Phinn, P.J. Mumby, O. Barrilero, J. Laporte and B. Koetz, 2018. Coral reef applications of Sentinel-2: Coverage, characteristics, bathymetryand benthic mapping with comparison to Landsat 8. Remote Sensing of Environment, 216: 598-614.

Hemingson, C.R. and D.R. Bellwood, 2018. Biogeographic patterns in major marine realms: function not taxonomy unites fish assemblages in reef, seagrass and mangrove systems. Ecography, 41: 174–182.

Hempson, T.N., N.A.J. Graham, M.A MacNeil, A.S. Hoey and G.R. Almany, 2018. Mesopredator trophodynamics on thermally stressed coral reefs. Coral Reefs, 37: 135-144.

Hing, M.L., O.S. Klanten, M. Dowton, K.R. Brown and M.Y.L. Wong, 2018. Repeated cyclone events reveal potential causes of sociality in coral-dwelling Gobiodon fishes. PLoS ONE 13(9): e0202407.

Horká, I., S. De Grave, C.H.J.M. Fransen, A. Petrusek and Z. Duriš, 2018. Multiple origins and strong phenotypic convergence in fish-cleaning palaemonid shrimp lineages. Molecular Phylogenetics and Evolution, 124: 71-81.

Huston, D.C., S.C. Cutmore and T.H. Cribb, 2018. Trigonocephalotrema (Digenea : Haplosplanchnidae), a new genus for trematodes parasitising fishes of two Indo-West Pacific acanthurid genera. Invertebrate Systematics, 32: 759–773.

Jain-Schlaepfer, S., E. Fakan, J.L. Rummer, S.D. Simpson and M.I. McCormick, 2018. Impact of motorboats on fish embryos depends on engine type. Conservation Physiology, 6: 10.1093/conphys/coy014.

Jenkins, B.W., 2018. Revision of the genus Pugillaria Iredale, 1924 (Mollusca: Panpulmonata: Siphonariidae). Molluscan Research, 38(4): 274-286.

Komyakova, V., G.P. Jones and P.L. Munday, 2018. Strong effects of coral species on the diversity and structure of reef fish communities: A multi-scale analysis. PLoS ONE, 13(8): e0202206.

Kroon, F.J., C.E. Motti, L.H. Jensen and K.L.E. Berry, 2018. Classification of marine microdebris: A review and case study on fish from the Great Barrier Reef, Australia. Scientific Reports, 8: 16422 2018.

Loffler, Z., A. Graba-Landry, J.T. Kidgell, E.C. McClure, M.S. Pratchett and A.S. Hoey, 2018. Holdfasts of Sargassum swartzii are resistant to herbivory and resilient to damage. Coral Reefs, 37: 1075-1084.

Lonnstedt, O., M.C.O. Ferrari and D.P. Chivers, 2018. Correction to ‘Lionfish predators use flared fin displays to initiate cooperative hunting’. Biology Letters, 14: 20170716.=

Luehrmann, M., 2018. Colour vision diversity in coral reef fishes: Cardinalfish (Apogonidae). PhD thesis, University of Queensland.

Madin, J.S., A.H. Baird, T.C.L. Bridge, S.R. Connolly, K.J.A. Zawada and M. Dornelas, 2018. Cumulative effects of cyclones and bleaching on coral cover and species richness at Lizard Island. Marine Ecology Progress Series, 604: 263–268.

Martin, S.B., D. Ribu, S.C. Cutmore and T.H. Cribb, 2018. Opistholobetines (Digenea: Opecoelidae) in Australian tetraodontiform fishes. Systematic Parasitology, 95: 743-781.

Martin, S.B., S.C. Cutmore and T.H. Cribb, 2018. Revision of Podocotyloides Yamaguti, 1934 (Digenea: Opecoelidae), resurrection of Pedunculacetabulum Yamaguti, 1934 and the naming of a cryptic opecoelid species. Systematic Parasitology, 95: 1–31.

McCormick, M.I., B.J.M. Allan, H. and S.D. Simpson, 2018. Boat noise impacts risk assessment in a coral reef fish but effects depend on engine type. Scientific Reports, 8: 3847.

McCormick, M.I., E. Fakan and B.J.M. Allan, 2018. Behavioural measures determine survivorship within the hierarchy of whole- organism phenotypic traits. Functional Ecology, 32: 958-969.

McCormick, M.I., S.-A. Watson, S.D. Simpson and B.J.M. Allan, 2018. Effect of elevated CO2 and small boat noise on the kinematics of predator– prey interactions. Proceedings of the Royal Society B, 285: 20172650.

McWilliam, J.N., 2018. Coral reef soundscapes: the use of passive acoustic monitoring for long-term ecological survey. PhD thesis, Curtin University.

Miller, T.H., S.C. Cutmore and T.H. Cribb, 2018. Two species of Neometadena Hafeezullah & Siddiqi, 1970 (Digenea: Cryptogonimidae) from Moreton Bay, Australia, including the description of Neometadena paucispina n. sp. from Australian Lutjanidae. Systematic Parasitology, 95: 655–664.

Moravec, F., S.C. Cutmore and R.Q.-Y. Yong, 2018. Redescription of Philometra pellucida (Jagerskiold, 1893) (Nematoda: Philometridae) parasitic in the abdominal cavity of the blackspotted puffer Arothron nigropunctatus (Bloch & Schneider) (Teleostei: Tetraodontidae) off Australia and Japan. Systematic Parasitology, 95: 665–671.

Nadler, L.E., S.S. Killen, P. Domenici and M.I. McCormick, 2018. Role of water flow regime in the swimming behaviour and escape performance of a schooling fish. Biology Open, 7, bio031997.

Nicolet, K.J., K.M. Chong-Seng, M.S. Pratchett, B.L. Willis and M.O. Hoogenboom, 2018. Predation scars may infuence host susceptibility to pathogens: evaluating the role of corallivores as vectors of coral disease. Scientific Reports, 8: 5258.

Nicolet, K.J., M.O. Hoogenboom, M.S. Pratchett and B.L. Willis, 2018. Selective feeding by corallivorous fishes neither promotes nor reduces progression rates of black band disease. Marine Ecology Progress Series, 594: 95-106.

Nowicki, J.P., L.A. O’Connell, P.F. Cowman, S.P.W. Walker, D.J. Coker and M.S. Pratchett, 2018. Variation in social systems within Chaetodon butterflyfishes, with special reference to pair bonding. PLoS ONE, 13(4): e0194465.

Nowicki, J.P., S.P.W. Walker, D.J.Coker, A.S. Hoey, K.J. Nicolet and M.S. Pratchett, 2018. Pair bond endurance promotes cooperative food defense and inhibits conflict in coral reef butterfyfish. Scientific Reports, 8: 6295.

Palacios, M.M., M.E. Malerba and M.I. McCormick, 2018. Multiple predator effects on juvenile prey survival. Oecologia, 188: 417–427.

Palmer, C.V. and A.H. Baird, 2018. Coral tumor-like growth anomalies induce an immune response and reduce fecundity. Diseases of Aquatic Organisms, 130: 77-81.

Parris, D.J., 2018. Microbiome community change in the guts of marine fish: feeing and life state transition as significant organizing factors. PhD thesis, Georgia Institute of Technology.

Petrescu, I., 2018. On the family Nannastacidae (Crustacea, Cumacea) from the Australian Museum Collection. Records of the Australian Museum, 70(1): 1–111.

Phuong, M.A. and G.N. Mahardika, 2018. Targeted sequencing of venon genes from cone snail genomes improves understanding of conotoxin molecular evolution. Molecular Ecology and Evolution, doi: 10.1093/molbev/msy034.

Pollock, F.J., R. McMinds, S. Smith, D.G. Bourne, B.L. Willis, M. Medina, R. Vega Thurber and J.R. Zaneveld, 2018. Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny. Nature Communications, 9: 4921.

Powell, S.B., R. Garnett, J. Marshall, C. Rizk and V. Gruev, 2018. Bioinspired polarization vision enables underwater geolocalization. Science Advances, 4: eaao6841.

Quattrini, F.G., R. Bshary and D.G. Roche, 2018. Does the presence of an odd individual affect group choice? Behavioral Ecology, 29(4): 855–861.

Raby, G.D., J. Sundin, F. Jutfelt, S.J. Cooke and T.D. Clark, 2018. Exposure to elevated carbon dioxide does not impair short-term swimming behaviour or shelter-seeking in a predatory coral-reef fish. Journal of Fish Biology, 93: 138–142.

Raby, G.D., V. Messmer, A.J. Tobin, A.S. Hoey, F. Jutfelt, J. Sundin, S.J. Cooke and T.D. Clark, 2018. Swim for it: effects of simulated fisheries capture on the post-release behaviour of four Great Barrier Reef fishes. Fisheries Research, 206: 129–137 2018.

Richardson, L.E., N.A.J. Graham, M.S. Pratchett, J.G. Eurich and A.S. Hoey, 2018. Mass coral bleaching causes biotic homogenization of reef fish assemblages. Global Change Biology, 24(7): 3117-3129.

Rivers, H., 2018. A comparison of the composition of juvenile and adult scleractinial coral populations after major disturbance at Lizard Island. Undergraduate thesis, School for International Training, USA.

Song, J.-H., N.L. Bruce and G.-S. Min, 2018. The first records of Stenobermuda Schultz, 1982 and Tenupedunculus Schultz, 1979 from Australia, with description of two new species from the Great Barrier Reef (Isopoda, Asellota, Stenetriidae). ZooKeys, 733: 1–24.

Stepien, A., K. Pabis and M. Blazewicz, 2018. Small-scale species richness of the Great Barrier Reef tanaidaceans—results of the CReefs compared with worldwide diversity of coral reef tanaidaceans. Marine Biodiversity, doi.org/10.1007/s12526-018-0894-5.

Streit, R.P. and D.R. Bellwood, 2018. Strong homing does not predict high site fidelity in juvenile reef fishes. Coral Reefs, 37: 99-13.

Sun, Y., E. Wong, S.T. Ahyong, J.E. Williamson, P.A. Hutchings and E.K. Kupriyanova, 2018 . Barcoding and multi-locus phylogeography of the globally distributed calcareous tubeworm genus Hydroides Gunnerus, 1768 (Annelida, Polychaeta, Serpulidae). Molecular Phylogenetics and Evolution, 127: 732–745.

Takama, O., I. Fernandez-Silva, C. and J.D. Reimer, 2018. Molecular phylogeny demonstrates the need for taxonomic reconsideration of species diversity of the hydrocoral genus Millepora (Cnidaria: Hydrozoa) in the Pacific. Zoological Science, 35: 123–133.

Taylor, B.M., E.D.L. Trip and J.H. Choat, 2018. Dynamic demography: investigations of life-history variation in the parrotfishes. Chapter 4 in Biology of Parrotfishes, eds. A.S. Hoey and R.M. Bonaldo, CRC Press, Boca Raton, FL, USA.

Taylor, K.H., G.W. Rouse and C.G. Messing, 2018. Revising Mariametridae: the genera Dichrometra, Lamprometra, and Liparometra (Echinodermata: Crinoidea). Systematics and Biodiversity, 16(2): 142-159.

Tebbett, S.B. and D.R. Bellwood, 2018. Functional links on coral reefs: urchins and triggerfishes, a cautionary tale. Marine Environmental Research, 141: 255-263.

Tebbett, S.B., C.H.R. Goatley, V. Huertas, M. Mihalitsis and D.R. Bellwood, 2018. A functional evaluation of feeding in the surgeonfish Ctenochaetus striatus: the role of soft tissues. Royal Society Open Science, 5: 171111.

Tebbett, S.B., D.R. Bellwood and S.W. Purcell, 2018. Sediment addition drives declines in algal turf yield to herbivorous coral reef fishes: implications for reefs and reef fisheries. Coral Reefs, 37: 929-937.

Thoen, H.H., M.E. Sayre, J. Marhsall and N.J. Strausfeld, 2018. Representation of the stomatopod’s retinal midband in the opticlobes: putative neural substrates for integrating chromatic, achromatic and polarization information. Journal of Comparative Neurology, 526: 1148–1165.

Triki, Z. and R. Bshary, 2018. Cleaner fsh Labroides dimidiatus discriminate numbers but fail a mental number line test. Animal Cognition, 21: 99–107.

Triki, Z., S. Wismer, E. Levorato and R. Bshary, 2018. A decrease in the abundance and strategic sophistication of cleaner fish after environmental perturbations. Global Change Biology, 24(1): 481-489.

Uthicke, S., M. Lamare and J.R. Doyle, 2018. eDNA detection of corallivorous seastar (Acanthaster cf. solaris) outbreaks on the Great Barrier Reef using digital droplet PCR. Coral Reefs, 37: 1229-1239.

Vaughan, D.B., A.S. Grutter and K.S. Hutson, 2018. Cleaner shrimp are a sustainable option to treat parasitic disease in farmed fish. Scientific Reports, 8: 13959.

Winters, A.E., A.M. White, A.S. Dewi, I.W. Mudianta, N.G. Wilson, L.C. Forster, M.J. Garson and K.L. Cheney, 2018. Distribution of defensive metabolites in nudibranch molluscs. Journal of Chemical Ecology, 44: 384–396.

Wolstenholme, J., Y. Nozawa, M. Byrne and W. Burke, 2018. Timing of mass spawning in corals: potential influence of the coincidence of lunar factors and associated changes in atmospheric pressure from northern and southern hemisphere case studies. Invertebrate Reproduction and Development, 62(2): 98-108.

Yong, R.Q.-Y., S.C. Cutmore, M.K. Jones, A.R.G. Gauthier and T.H. Cribb, 2018. A complex of the blood fluke genus Psettarium (Digenea: Aporocotylidae) infecting tetraodontiform fishes of east Queensland waters. Parasitology International, 67: 321–340 2018.

York, P.H., P.I. Macreadie and M.A. Rasheed, 2018. Blue carbon stocks of Great Barrier Reef deep-water seagrasses. Biology Letters, 14: 20180529.

Ziegler, M., E. Stone, D. Colman, C. Takacs-Vesbach and U.L. Shepherd, 2018. Patterns of Symbiodinium (Dinophyceae) diversity and assemblages among diverse hosts and the coral reef environment of Lizard Island, Australia. Journal of Phycology, 54: 447–460.


2017 LIRS publications: 121

Aguado, M.T., C. Noreña, L. Alcaraz, D. Marquina, F. Brusa, C. Damborenea, B. Almon, C. Bleidorn and C. Grande, 2017. Phylogeny of Polycladida (Platyhelminthes) based on mtDNA data. Organisms, Diversity and Evolution, 17: 767-778.

Allan, B.J.M, P. Domenici, S.-A. Watson, P.L. Munday and M.I. McCormick, 2017. Warming has a greater effect than elevated CO2 on predator– prey interactions in coral reef fish. Proceedings of the Royal Society B, 284: 20170784.

Allen, J.D., K.R. Schrage, S.A. Foo, S.-A. Watson and M. Byrne, 2017. The effects of salinity and pH on fertilization, early development, and hatching in the Crown-of-Thorns Seastar. Diversity 9(1): 13.

Alvarez-Campos, P., G. Giribet, G. San Martin, G.W. Rouse and A. Riesgo, 2017. Straightening the striped chaos: systematics and evolution of Trypanosyllis and the case of its pseudocryptic type species Trypanosyllis krohnii (Annelida, Syllidae). Zoological Journal of the Linnean Society, 179: 492–540.

Anderson, K.D., N.E. Cantin, S.F. Heron, C. Pisapia and M.S. Pratchett, 2017. Variation in growth rates of branching corals along Australia’s Great Barrier Reef. Scientific Reports, 7: 2920.

Bainbridge, S.J., 2017. Temperature and light patterns at four reefs along the Great Barrier Reef during the 2015-2016 austral summer: understanding patterns of observed coral bleaching. Journal of Operational Oceanography, 10(1): 16-29.

Bellwood, D.R., S.B. Tebbett, O. Bellwood, M. Mihalitsis, R.A. Morais, R.P. Streit and C.J. Fulton, 2017. The role of the reef flat in coral reef trophodynamics: Past, present, and future. Ecology and Evolution, 8: 4108–4119.

Binning, S.A., O. Rey, S. Wismer, Z. Triki, G. Glauser, M.C. Soares and R. Bshary, 2017. Reputation management promotes strategic adjustment of service quality in cleaner wrasse. Scientific Reports, 7: 8425.

Blowes, S.A., M.S. Pratchett and S.R. Connolly, 2017. No change in subordinate butterflyfish diets following removal of behaviourally dominant species. Coral Reefs, 36: 213-222.

Blowes, S.A., M.S. Pratchett and S.R. Connolly, 2017. Aggression, interference, and the functional response of coral-feeding butterflyfishes. Oecologia, 184(3): 675-684.

Bogdanov, A., C. Hertzer, S. Kehraus, S. Nietzer, S. Rohde, P.J. Schupp, H. Waegele and G.M. König, 2017. Secondary metabolome and its defensive role in the aeolidoidean Phyllodesmium longicirrum, (Gastropoda, Heterobranchia, Nudibranchia). Beilstein Journal of Organic Chemistry, 13: 502–519.

Bok, M.J., M.L. Porter and D.-E. Nilsson, 2017. Phototransduction in fanworm radiolar eyes. Current Biology, 27(14): R698–R699.

Bok, M.J., M.L. Porter, H.A. Ten Hove, R. Smith and D.-E. Nilsson, 2017. Radiolar eyes of serpulid worms (Annelida, Serpulidae): structures, function, and phototransduction. Biological Bulletin, 233: 000-000,

Brooker, R.M., T.L. Sih and D.L. Dixson, 2017. Contact with seaweed alters prey selectivity in a coral-feeding reef fish. Marine Ecology Progress Series, 580: 239–244.

Bryson, M., R. Ferrari, W. Figueira, O. Pizarro, J. Madin, S. Williams and M. Byrne, 2017. Characterization of measurement errors using structure- from- motion and photogrammetry to measure marine habitat structural complexity. Ecology and Evolution, 7: 5669–5681.

Caballes, C.F. and M.S Pratchett , 2017. Environmental and biological cues for spawning in the crown-of-thorns starfish. PLoS One, 12(3): e0173964.

Caballes, C.F., M.S. Pratchett and A.C.E. Buck, 2017. Interactive effects of endogenous and exogenous nutrition on larval development for Crown-of-Thorns Starfish. Diversity, 9(1): 15.

Caceres-Chamizo, J.P., J. Sanner, K.J. Tilbrook and A.N. Ostrovsky, 2017. Revision of the Recent species of Exechonella Canu & Bassler in Duvergier, 1924 and Arctisecos Canu & Bassler, 1927 (Bryozoa, Cheilostomata): systematics, biogeography and evolutionary trends in skeletal morphology. Zootaxa, 4305: 1-79.

Chartrand K.M., C.V. Bryant, A. Sozou, P.J. Ralph and M.A. Rasheed, 2017. Final Report: Deep-water seagrass dynamics-Light requirements, seasonal change and mechanisms of recruitment. Centre for Tropical Water & Aquatic Ecosystem Research (TropWATER) Publication, James Cook University, Report No 17/16. Cairns, 67 pp.

Chegoonian, A.M., M. Mokhtarzade and M.J. Valadan Zoej, 2017. A comprehensive evaluation of classification algorithms for coral reef habitat mapping: challenges related to quantity, quality, and impurity of training samples. International Journal of Remote Sensing, 38, 4224-4243.

Cheney, K.L., F. Cortesi and H. Nilsson Skold, 2017. Regulation, constraints and benefits of colour plasticity in a mimicry system. Biological Journal of the Linnean Society, 122: 385–393.

Chivers, D.P., M.I. McCormick, D.T. Warren, B.J.M. Allan, R.A. Ramasamy, B.K. Arvizu, M. Glue and M.C.O. Ferrari, 2017. Competitive superiority versus predation savvy: the two sides of behavioural lateralization. Animal Behaviour, 130: 9-15.

Clark, T.D., D.G. Roche, S.A. Binning, B. Speers-Roesch and J. Sundin, 2017. Maximum thermal limits of coral reef damselfishes are size dependent and resilient to near-future ocean acidification. Journal of Experimental Biology, 220: 3519-3526.

Coker, D.J., J.P. Nowicki and N.A.J. Graham, 2017. Influence of coral cover and structural complexity on the accuracy of visual surveys of coral-reef fish communities. Journal of Fish Biology, 90: 2425–2433.

Cowan, Z.-L., 2017. Predation on the early life stages of crown-of-thorns starfish (Acanthaster cf. solaris). PhD thesis, James Cook University.

Cowan, Z.L., M. Pratchett, V. Messmer and S. Ling, 2017. Known predators of Crown-of-Thorns Starfish (Acanthaster spp.) and their role in mitigating, if not preventing, population outbreaks. Diversity 9(1): 7.

Cowan, Z.-L., S.D. Ling, S.A. Dworjanyn, C.F. Caballes and M.S. Pratchett, 2017. Interspecific variation in potential importance of planktivorous damselfishes as predators of Acanthaster sp. eggs. Coral Reefs, 36: 653–661.

Diaz, P.E., S.C. Cutmore and T.H. Cribb, 2017. Four new species of Paradiscogaster Yamaguti, 1934 (Digenea: Faustulidae) from batfishes (Perciformes: Ephippidae) on the Great Barrier Reef, Australia. Systematic Parasitology, 94: 339–349.

Doo, S.S., 2017. Understanding the functional role of large benthic foraminifera on coral reefs in a changing climate. PhD thesis, University of Sydney.

Dornelas, M. J.S. Madin, A.H. Baird and S.R. Connolly, 2017. Allometric growth in reef-building corals. Proceedings of the Royal Society B, 284: 20170053.

Duris, Z. and I. Horka, 2017. Towards a revision of the genus Periclimenes: resurrection of Ancylocaris Schenkel, 1902, and designation of three new genera (Crustacea, Decapoda, Palaemonidae). ZooKeys, 646: 25–44.

Ern, R., J.L. Johansen, J.L. Rummer and A.J. Esbaugh, 2017. Effects of hypoxia and ocean acidification on the upper thermal niche boundaries of coral reef fishes. Biology Letters, 13: 20170135.

Erséus, C., I. Envall, P. De Wit and L.M. Gustavsson, 2017. Molecular data reveal a tropical freshwater origin of Naidinae (Annelida, Clitellata, Naididae). Molecular Phylogenetics and Evolution, 115: 115-127

Ferrari, M.C.O., M.I. McCormick, B.J.M. Allan and D.P. Chivers, 2017. Not equal in the face of habitat change: closely related fishes differ in their ability to use predation-related information in degraded coral. Proceedings of the Royal Society B, 284: 20162758.

Ferrari, M.C.O., M.I. McCormick, M.D. Mitchell, B.J.M. Allan, E.J. Gonçalves and D.P. Chivers, 2017. Daily variation in behavioural lateralization is linked to predation stress in a coral reef fish. Animal Behaviour, 133: 189-193.

Ferrari, M.C.O., M.I. McCormick, S.-A. Watson, M.G. Meekan, P.L. Munday and D.P. Chivers, 2017. Predation in high CO2 waters: prey fish from high-risk environments are less susceptible to ocean acidification. Integrative and Comparative Biology, 57: 55-62.

Ferrari, R., 2017. The hidden structure in coral reefs. Coral Reefs, 36: 445.

Ferrari, R., W.F. Figueira, M.S. Pratchett, T. Boube, A. Adam, T. Kobelkowsky-Vidrio, S.S. Doo, T.B Atwood and M. Byrne, 2017. 3D photogrammetry quantifies growth and external erosion of individual coral colonies and skeletons. Scientific Reports, 7: 1637.

Garcia, M., C. Edmiston, R. Marinov, A. Vail and V. Gruev, 2017. Bio-inspired color-polarization imager for real-time in situ imaging. Optica, 4(10): 9 pp.

Gingins, S., D.G. Roche and R. Bshary, 2017. Mutualistic cleaner fish maintains high escape performance despite privileged relationship with predators. Proceedings of the Royal Society B, 284(1853): 20162469.

Goatley, C.H.R., A. Gonzalez-Cabello and D.R. Bellwood, 2017. Small cryptopredators contribute to high predation rates on coral reefs. Coral Reefs, 36(1): 207-212.

Grutter, A.S., M. De Brauwer, R. Bshary, K.L. Cheney, T.H. Cribb, E.M.P. Madin, E.C. McClure, M.G. Meekan, D. Sun, R.R. Warner, J. Werminghausen and P.C. Sikkel, 2017. Parasite infestation increases on coral reefs without cleaner fish. Coral Reefs, DOI 10.1007/s00338-017-1628-z.

Grutter, A.S., S.P. Blomberg, B. Fargher, A.M. Kuris, M.I. McCormick and R.R. Warner, 2017. Size-related mortality due to gnathiid isopod micropredation correlates with settlement size in coral reef fishes. Coral Reefs, 36(2): 549-559.

Habary, A., J.L . Johansen, T.J. Nay, J.F. Steffensen and J.L. Rummer, 2017. Adapt, move or die - how will tropical coral reef fishes cope with ocean warming? Global Change Biology, 23: 566-577.

Harrison, H.B., M.S. Pratchett, V. Messmer, P. Saenz-Agudelo and M.L. Berumen, 2017. Microsatellites reveal genetic homogeneity among outbreak populations of Crown-of-Thorns Starfish (Acanthaster cf. solaris) on Australia’s Great Barrier Reef. Diversity, 9(1): 16.

Hata, T., J.S. Madin, V.R. Cumbo, M. Denny, J. Figueiredo, S. Harii, C.J. Thomas and A.H. Baird, 2017. Coral larvae are poor swimmers and require fine-scale reef structure to settle. Scientific Reports, 7: 2249.

He, S., J.L. Johansen, A.S. Hoey, M.K. Pappas and M.L. Berumen, 2017. Molecular confirmation of hybridization between Dascyllus reticulatus × Dascyllus aruanus from the Great Barrier Reef. Marine Biodiversity, doi.org/10.1007/s12526-017-0819-8.

Holmes, L.J., J. McWilliam, M.C.O. Ferrari and M.I. McCormick, 2017. Juvenile damselfish are affected but desensitize to small motor boat noise. Journal of Experimental Marine Biology and Ecology, 494: 63–68.

Hoogenboom, M.O., G.E. Frank, T.J. Chase, S. Jurriaans, M. Álvarez-Noriega, K. Peterson, K. Critchell, K.L.E. Berry, K.J. Nicolet, B. Ramsby and A.S. Paley, 2017. Environmental drivers of variation in bleaching severity of Acropora species during an extreme thermal anomaly. Frontiers in Marine Science, 4: 376.

Huston, D.C, S,C. Cutmore and T.H. Cribb, 2017. Molecular phylogeny of the Haplosplanchnata Olson, Cribb, Tkach, Bray and Littlewood, 2003, with a description of Schikhobalotrema huffmani n. sp. Acta Parasitologica, 62(3): 502-512.

Jeffery, N.W., E.A. Ellis, T.H. Oakley, and T.R. Gregory, 2017. The genome sizes of ostracod crustaceans correlate with body size and evolutionary history, but not environment. Journal of Heredity, 2017, 1–6, doi:10.1093/jhered/esx055.

Johansen, J., S. He, M.K. Pappas, M.L. Berumen, G. Frank and A.S. Hoey, 2017. Hybridization between damselfishes Dascyllus aruanus and D. reticulatus on the Great Barrier Reef. Coral Reefs, 36: 717.

Johansen, J.L., B.J.M. Allan, J.L. Rummer and A.J. Esbaugh, 2017. Oil exposure disrupts early life-history stages of coral reef fishes via behavioural impairments. Nature, Ecology and Evolution, DOI: 10.1038/s41559-017-0232-5

Kerry, J.T. and D.R. Bellwood, 2017. Environmental drivers of sheltering behaviour in large reef fishes. Marine Pollution Bulletin, 125: 254–259.

Khan, J.A., C.H.R. Goatley, S.J. Brandl, S.B. Tebbett1 and D.R. Bellwood, 2017. Shelter use by large reef fishes: long-term occupancy and the impacts of disturbance. Coral Reefs, 36(4): 1123–1132.

Kingsford, M.J., M.D. O'Callaghan, L. Liggins and G. Gerlach, 2017. The short-lived neon damsel Pomacentrus coelestis: implications for population dynamics. Journal of Fish Biology, 90: 2041–2059.

Kramer, M.J., D.R. Bellwood, R.B. Taylor and O. Bellwood, 2017. Benthic Crustacea from tropical and temperate reef locations: differences in assemblages and their relationship with habitat structure. Coral Reefs, 36(3): 971–980.

LaPlante, L.H., 2017. Female nuptial signal advertises spawning readiness in a population of Halichoeres margaritaceus on the Great Barrier Reef, Australia. Ichthyological Research, 64: 331–338.

Lin, C. and T.W. Cronin, 2017. Two visual systems in one eyestalk: the unusual optic lobe metamorphosis in the stomatopod Alima paci?ca. Developmental Neurobiology, doi 10.1002/dneu.22550.

Liu, Y., and C. Erseus, 2017. New specific primers for amplification of the Internal Transcribed Spacer region in Clitellata (Annelida). Ecology and Evolution, 7: 10421–10439.

MacNeil, M.A., K.M. Chong-Seng, D.J. Pratchett, C.A. Thompson, V. Messmer and M.S. Pratchett, 2017. Age and growth of an outbreaking Acanthaster cf. solaris population within the Great Barrier Reef. Diversity, 9(1): 18.

Martin, S.B., S.C. Cutmore and T.H. Cribb, 2017. Revision of Neolebouria Gibson, 1976 (Digenea: Opecoelidae), with Trilobovarium n. g., for species infecting tropical and subtropical shallow-water fishes. Systematic Parasitology, 94: 307-338.

McCormick, M.I. and B.J.M. Allan, 2017. Interspecific differences in how habitat degradation affects escape response. Scientific Reports, 7: 426.

McCormick, M.I., R.P. Barry and B.J.M. Allan, 2017. Algae associated with coral degradation affects risk assessment in coral reef fishes. Scientific Reports, 7: 16937.

McWilliam, J.N., R.D. McCauley, C. Erbe and M.J.G. Parsons, 2017. Patterns of biophonic periodicity on coral reefs in the Great Barrier Reef. Scientific Reports, 7: 17459.

McWilliam, J.N., R.D. McCauley, C. Erbe and M.J.G. Parsons, 2017. Soundscape diversity in the Great Barrier Reef: Lizard Island, a case study. Bioacoustics, DOI: 10.1080/09524622.2017.1344930.

Mendoza-Franko, E.F., S.A. Binning and D.G. Roche, 2017. New and previously described dactylogyrid species (Monogenoidea: Polyonchoinea) and a gastrocotylinean pre-adult (Heteronchoinea) from pomacentrid and caesionid (Perciformes) fishes from Lizard Island, Great Barrier Reef, Australia. Acta Parasitologica, 62(3): 688-698.

Messmer, V., M. Pratchett and K. Chong-Seng, 2017. Variation in incidence and severity of injuries among Crown-of-Thorns Starfish (Acanthaster cf. solaris) on Australia’s Great Barrier Reef. Diversity, 9(1): 12.

Mitchell, L., K.L. Cheney, F. Cortesi, N.J. Marshall and M. Vorobyev, 2017. Triggerfish uses chromaticity and lightness for object segregation. Royal Society Open Science, 4: 171440.

Moreira, J. and J. Parapar, 2017. New data on the Opheliidae (Annelida) from Lizard Island (Great Barrier Reef, Australia): five new species of the genus Armandia Filippi, 1861. Zootaxa, 4290(3): 483-502.

Munoz, A., 2017. Coral bleaching and the effect of disturbances on the damselfish community on Lizard Island, Australia. School for International Training Independent Study Project Collection, 2639.

Natt, M., O.M. Lonnstedt, M.I. McCormick, 2017. Coral reef fish predator maintains olfactory acuity in degraded coral habitats. PLoS One, 12(6): e0179300.

Nedelec, S.L., A.N. Radford, L. Pearl, B. Nedelec, M.I. McCormick, M.G. Meekan and S.D. Simpson, 2017. Motorboat noise impacts parental behaviour and offspring survival in a reef fish. Proceedings of the Royal Society B, 284: 20170143.

Neo, M.L., C.C.C. Wabnitz, R.D. Braley, G.A. Heslinga, C. Fauvelot, S. Van Wynsberge, S. Andrefouet, C. Waters, A. Shau-Hwai Tan, E.D. Gomez, M.J. Costello and P.A. Todd, 2017. Giant clams (Bivalvia: Cardiidae: Tridacninae): A comprehensive update of species and their distribution, current threats and conservation status. Oceanography and Marine Biology: An Annual Review, 55: 87-388.

Newport, C., N.F. Green, E.C. McClure, D.C. Osorio, M. Vorobyev, N.J. Marshall and K.L. Cheney, 2017. Fish use colour to learn compound visual signals. Animal Behaviour, 125: 93-100.

O'Connor, J. and R. Muheim, 2017. Pre-settlement coral-reef fish larvae respond to magnetic field changes during the day. Journal of Experimental Biology, 220: 2874-2877.

Palacios Otero, M., 2017. Controlling mesopredators: importance of behavioural interactions in trophic cascades. PhD thesis, James Cook University.

Pereira, P.H.C., 2017. Benthic composition infuences habitat use and toxicity of coral-dwelling fishes. Marine Biology, 2017: 164:189.

Phillips, G.A.C., M.J. How, J.E. Lange, N.J. Marshall and K.L. Cheney, 2017. Disruptive colouration in reef fish: does matching the background reduce predation risk? Journal of Experimental Biology, 220: 1962-1974.

Pizarro, O., A. Friedman, M. Bryson, S.B. Williams and J. Madin, 2017. A simple, fast, and repeatable survey method for underwater visual 3D benthic mapping and monitoring. Ecology and Evolution, 7: 1770–1782.

Powell, S.B., 2017. Underwater celestial navigation using the polarization of light fields. PhD thesis, Washington University in St Louis.

Prantoni A., P.C. Lana and C. Erséus, 2017. Global checklist of species of Grania (Clitellata: Enchytraeidae) with remarks on their geographic distribution. European Journal of Taxonomy, 391: 1–44.

Pratchett, M.S., S. Dworjanyn, B. Mos, C.F. Caballes, C.A. Thompson and S. Blowes, 2017. Larval survivorship and settlement of Crown-of-Thorns Starfish (Acanthaster cf. solaris) at varying algal cell densities. Diversity, 9(1): 2.

Pratchett, M.S., Z.-L. Cowan, L.E. Nadler, C.F. Caballes, A.S. Hoey, V. Messmer, C.S. Fletcher, D.A. Westcott and S.D. Ling, 2017. Body size and substrate type modulate movement by the western Pacific crown-of thorns starfish, Acanthaster solaris. PLoS One, 12(9): e0180805.

Prazeres, M., T. Ainsworth, T.E. Roberts, J.M. Pandolfi and W. Leggat, 2017. Symbiosis and microbiome flexibility in calcifying benthic foraminifera of the Great Barrier Reef. Microbiome, 5: 38.

Prazeres, M., T.E. Roberts and J.M. Pandolfi, 2017. Shifts in species abundance of large benthic foraminifera Amphistegina: the possible effects of Tropical Cyclone Ita. Coral Reefs, 36: 305-309.

Prazeres, M., T.E. Roberts and J.M. Pandolfi, 2017. Variation in sensitivity of large benthic Foraminifera to the combined effects of ocean warming and local impacts. Scientific Reports, 7: 45227.

Quattrini, F.G., 2017. Grouping as an anti-predator strategy: two case studies in coral reef fishes. MSc thesis, University of Neuchatel.

Ramasamy, R., B.J.M. Allan, M.I. McCormick, D.P. Chivers, M.D. Mitchell and M.C.O. Ferrari, 2017. Juvenile coral reef fish alter escape responses when exposed to changes in background and acute risk levels. Animal Behaviour, 134: 15-22.

Ramasamy, R.A., 2017. The effects of high-risk conditions on coral reef fishes. MPhil, James Cook University.

Reverter, M., T.H. Cribb, S.C. Cutmore , R.A. Bray, V. Parravicini and P. Sasal, 2017. Did biogeographical processes shape the monogenean community of butterflyfishes in the tropical Indo-west Pacific region? International Journal for Parasitology, 47: 447–455.

Richardson, L.E., N.A.J. Graham , M.S. Pratchett and A.S. Hoey, 2017. Structural complexity mediates functional structure of reef fish assemblages among coral habitats. Environmental Biology of Fishes, 100(3): 193-207.

Richardson, L.E., N.A.J. Graham and A.S. Hoey, 2017. Cross-scale habitat structure driven by coral species composition on tropical reefs. Scientific Reports, 7: 7557.

Saito, T., J. Okuno and A. Anker, 2017. Two new species of the stenopodidean shrimp genus Odontozona Holthuis, 1946 (Decapoda: Stenopodidae) from the Indo-West Pacific. Crustacean Research, 46: 25–55.

Schweinsberg, M. R. Tollrian and K.P. Lampert, 2017. Inter- and intra-colonial genotypic diversity in hermatypic hydrozoans of the family Milleporidae. Marine Ecology, 38(1): e12388.

Scott, A. and A.S. Hoey, 2017. Severe consequences for anemonefishes and their host sea anemones during the 2016 bleaching event at Lizard Island, Great Barrier Reef. Coral Reefs, 36: 873.

Scott, M., M. Heupel, A. Tobin and M. Pratchett, 2017. A large predatory reef fsh species moderates feeding and activity patterns in response to seasonal and latitudinal temperature variation. Scientific Reports, 7: 12966.

Steinke, D., J.R deWaard, M.F. Gomon , J.W. Johnson, H.K. Larson, O. Lucanus , G.I. Moore, S. Reader and R.D. Ward, 2017. DNA barcoding the fishes of Lizard Island (Great Barrier Reef). Biodiversity Data Journal, 5: e12409.

Stieb, S.M, F. Cortesi, L. Sueess, K.L. Carleton, W. Salzburger and N.J. Marshall, 2017. Why UV vision and red vision are important for damselfish (Pomacentridae): structural and expression variation in opsin genes. Molecular Ecology, 26: 1323–1342.

Streit, R.P. and D.R. Bellwood, 2017. High prevalence of homing behaviour among juvenile coral-reef fishes and the role of body size. Coral Reefs, 36(4): 1083-1095.

Summers, M.M., C.G. Messing and G.W. Rouse, 2017. The genera and species of Comatulidae (Comatulida: Crinoidea): taxonomic revisions and a molecular and morphological guide. Zootaxa, 4268(2): 151-190.

Tebbett, S.B., C.H.R. Goatley and D.R. Bellwood, 2017. Clarifying functional roles: algal removal by the surgeonfishes Ctenochaetus striatus and Acanthurus nigrofuscus. Coral Reefs, 36: 803–813.

Tebbett, S.B., C.H.R. Goatley and D.R. Bellwood, 2017. Algal turf sediments and sediment production by parrotfishes across the continental shelf of the northern Great Barrier Reef. PLoS One, 12(1): e0170854.

Tebbett, S.B., C.H.R. Goatley and D.R. Bellwood, 2017. Fine sediments suppress detritivory on coral reefs. Marine Pollution Bulletin, 114: 934–940.

Tebbett, S.B., C.H.R. Goatley and D.R. Bellwood, 2017. The effects of algal turf sediments and organic loads on feeding by coral reef surgeonfishes. PLoS One, 12(1): e0169479.

Templin, R.M., M.J. How, N.W. Roberts, T.-H. Chiou and J. Marshall, 2017. Circularly polarized light detection in stomatopod crustaceans: a comparison of photoreceptors and possible function in six species. Journal of Experimental Biology, 220: 3222-3230.

ter Poorten, J.J., L.A. Kirkendale and J.-M. Poutiers, 2017. The Cardiidae (Mollusca: Bivalvia) of tropical northern Australia: A synthesis of taxonomy, biodiversity and biogeography with the description of four new species. Records of the Western Australian Museum, 32: 101-190.

Thoen, H.H., T.-H. Chiou and N.J. Marshall, 2017. Intracellular recordings of spectral sensitivities in stomatopods: a comparison across species. Integrative and Comparative Biology, 57(5): 1117-1129.

Thoen, H.H., J. Marshall, G.H. Wolff and N.J. Strausfeld, 2017. Insect-like organization of the stomatopod central complex: functional and phylogenetic implications. Frontiers in Behavioral Neuroscience, 11: 12.

Thoen, H.H., N.J. Strausfeld and J. Marshall, 2017. Neural organization of afferent pathways from the stomatopod compound eye. Journal of Comparative Neurology, 525: 3010–3030.

Triki, Z., R. Bshary, AS. Grutter and A.F.H. Ros, 2017. The arginine-vasotocin and serotonergic systems affect interspecific social behaviour of client fish in marine cleaning mutualism. Physiology and Behavior, 174: 36–143.

Vaughan, D.B. and K.W. Christison, 2017. Anoplodiscus Sonsino, 1890 (Monogenea: Anoplodiscidae): a new Australian species, and the first African record from South African hosts. Systematic Parasitology, 94: 891–906.

Wacker, S., M.H. Ness, S. Ostlund-Nilsson and T. Amundsen, 2017. Social structure affects mating competition in a damselfish. Coral Reefs, 36(4): 1279-1289.

Watson, S.-A., J.B. Fields and P.L. Munday, 2017. Ocean acidification alters predator behaviour and reduces predation rate. Biology Letters, 13: 20160797.

Watson, S.-A., K.E. Fabricius and P.L. Munday, 2017. Quantifying pCO2 in biological ocean acidification experiments: a comparison of four methods. PLoS One, 12(9): e0185469.

Welch, M.J. and P.L. Munday, 2017. Heritability of behavioural tolerance to high CO2 in a coral reef fish is masked by nonadaptive phenotypic plasticity. Evolutionary Applications, 10: 682–693.

Winters, A.E., N.F. Green, N.G. Wilson, M.J. How, M.J. Garson, N.J. Marshall and K.L. Cheney, 2017. Stabilizing selection on individual pattern elements of aposematic signals. Proceedings of the Royal Society B, 284: 20170926.

Wismer, S., 2017. The ecology underlying the decision rules of Bluestreak Cleaner Wrasse during client interactions. PhD thesis, University of Neuchatel, Switzerland.

Wolff, G.H., H.H. Thoen, J. Marshall, M.E. Sayre and N.J. Strausfeld, 2017. An insect-like mushroom body in a crustacean brain. eLife, 6: e29889.

Zamora-Silva, A. and M.A.E. Malaquias, 2017. Molecular phylogeny of the Aglajidae head-shield sea slugs (Heterobranchia: Cephalaspidea): new evolutionary lineages revealed and proposal of a new classification. Zoological Journal of the Linnean Society, XX: 1–51.

Zanol, J.A., T.D.S.C. Da Silva and P. Hutchings, 2017. One new species and two redescriptions of Marphysa (Eunicidae, Annelida) species of the Aenea-group from Australia. Zootaxa, 4268(3): 411–426.


2016 LIRS publications: 92

Aguado, M.T., C. Grande, M. Gerth, C. Bleidornc and C. Noreña, 2016. Characterization of the complete mitochondrial genomes from Polycladida (Platyhelminthes) using next-generation sequencing. Gene, 575: 199-205.

Ahmadian, R., I. Burghardt and U.L. Shepherd, 2016. Embryonic development of the solar-powered nudibranch Phyllodesmium lizardensis (Gastropoda: Nudibranchia). Molluscan Research, 36(4): 285-289.

Álvarez-Noriega, M., A.H. Baird,2, M. Dornelas, J.S. Madin, V.R. Cumbo, and S.R. Connolly, 2016. Fecundity and the demographic strategies of coral morphologies. Ecology, 97(12): 3485-3493.

Anderson, K.D., 2016. Temporal and spatial variation in the growth of branching corals. PhD thesis, James Cook University.

Babcock, R.C., D.A. Milton and M.S. Pratchett, 2016. Relationships between size and reproductive output in the Crown-of-Thorns Starfish. Marine Biology, 163: 234, doi 10.1007/s00227-016-3009-5.

Bellwood, D.R., C.H.R. Goatley, J.A. Khan and S.B. Tebbett, 2016. Site fidelity and homing in juvenile rabbitfishes (Siganidae). Coral Reefs, 35: 1151-1155.

Bok, M.J., M. Capa and D.-E. Nilsson, 2016. Here, there and everywhere: the radiolar eyes of fan worms (Annelida, Sabellidae). Integrative and Comparative Biology, doi:10.1093/icb/icw089.

Brandl, S.J., 2016. Functional niche partitioning in herbivorous coral reef fishes. PhD thesis, James Cook University

Brandl, S.J. and D.R. Bellwood, 2016. Microtopographic refuges shape consumer-producer dynamics by mediating consumer functional diversity. Oecologia, 182: 203-217.

Brandl, S.J., M.J. Emslie and D.M. Ceccarelli, 2016. Habitat degradation increases functional originality in highly diverse coral reef fish assemblages. Ecosphere, 7(11): e01557.

Braun, C., R. Reef and U.E. Siebeck, 2016. Ultraviolet absorbing compounds provide a rapid response mechanism for UV protection in some reef fish. Journal of Photochemistry and Photobiology B, 160: 400-407.

Buck, A.C.E., N.M. Gardiner and L. Boström-Einarsson, 2016. Citric acid injections: an accessible and efficient method for controlling outbreaks of the Crown-of-Thorns Starfish, Acanthaster cf. solaris. Diversity, 8: 28, doi:10.3390/d8040028.

Capa, M. and A. Murray, 2016. Combined morphological and molecular data unveils relationships of Pseudobranchiomma (Sabellidae, Annelida) and reveals higher diversity of this intriguing group of fan worms in Australia, including potentially introduced species. ZooKeys, 622: 1-36.

Casey, J.M., A.H. Baird, S.J. Brandl, M.O. Hoogenboom, J.R. Rizzari, A.J. Frisch, C.E. Mirbach and S.R. Connolly, 2016. A test of trophic cascade theory: fish and benthic assemblages across a predator density gradient on coral reefs. Oecologia, doi 10.1007/s00442-016-3753-8.

Ceccarelli, D.M., M.J. Emslie and Z.T. Richards, 2016. Post-disturbance stability of fish assemblages measured at coarse taxonomic resolution masks change at finer scales. PLOS One, doi 10.1371/journal.pone.0156232.

Champ, C.M., M. Vorobyev and N.J. Marshall, 2016. Colour thresholds in a coral reef fish. Royal Society Open Science, 3: 160399.

Cheney, K.L., A. White, I.W. Mudianta, A.E. Winters, M. Quezada, R.J. Capon, E. Mollo and M.J. Garson, 2016. Choose your weaponry: selective storage of a single toxic compound, Latrunculin A, by closely related nudibranch molluscs. PLoS One, 11(1): e0145134.

Chivers D.P., M.I. McCormick, B.J.M. Allan and M.C.O. Ferrari, 2016. Risk assessment and predator learning in a changing world: understanding the impacts of coral reef degradation. Scientific Reports, 6: 32542.

Chivers, D.J., M.I. McCormick, B.J.M. Allan, M.D. Mitchell, , E.J. Goncalves, R. Bryshun and M.C.O. Ferrari, 2016. At odds with the group: changes in lateralization and escape performance reveal conformity and conflict in fish schools. Proceedings of the Royal Society B, 283: 20161127.

Clements, K.D., D.P. German, J. Piche, A. Tribollet and J.H. Choat, 2016. Integrating ecological roles and trophic diversification on coral reefs: multiple lines of evidence identify parrotfishes as microphages. Biological Journal of the Linnean Society, **:**.

Cortesi, F., Z. Musilova, S.M. Stieb, N.S. Hart, U.E. Siebeck, K.L. Cheney, W. Salzburger and N.J. Marshall, 2016. From crypsis to mimicry: changes in colour and the configuration of the visual system during ontogenetic habitat transitions in a coral reef fish. Journal of Experimental Biology, 219: 2545-2558.

Cowan, Z.-L., S.A. Dworjanyn, C. F. Caballes and M.S. Pratchett, 2016. Predation on Crown-of-Thorns Starfish larvae by damselfishes. Coral Reefs, doi 10.1007/s00338-016-1491-3.

Cowan, Z.-L., S.A. Dworjanyn, C.F. Caballes and M. Pratchett, 2016. Benthic predators influence microhabitat preferences and settlement success of Crown-of-Thorns Starfish (Acanthaster cf. solaris). Diversity, 8: 27, doi 10.3390/d8040027.

Cutmore S.C., B.K. Diggles and T.H. Cribb, 2016. Transversotrema Witenberg, 1944 (Trematoda: Transversotrematidae) from inshore fishes of Australia: description of a new species and significant
range extensions for three congeners. Systematic Parasitology, 93: 639-652.

Daly, I.M., M.J. How, J.C. Partridge, S.E. Temple, N.J. Marshall, T.W. Cronin and N.W. Roberts, 2016. Dynamic polarization vision in mantis shrimps. Nature Communications, 7: 12140.

Diaz-Pulido, G., C. Cornwall, P. Gartrell, C. Hurd and D.V. Tran, 2016. Strategies of dissolved inorganic carbon use in macroalgae across a gradient of terrestrial influence: implications for the Great Barrier Reef in the context of ocean acidification. Coral Reefs, doi 10.1007/s00338-016-1481-5.

Dougherty, L., 2016. Flashing in the 'Disco' Clam Ctenoides ales (Finlay, 1927): mechanisms and behavioral function. PhD thesis, University of California Berkeley.

Feller, K.D. and T.W. Cronin, 2016. Spectral absorption of visual pigments in stomatopod larval photoreceptors. Journal of Comparative Physiology A, 202: 215-223.

Frisch, A.J., M. Ireland, J.R. Rizzari, O.M. Lonnstedt, K.A. Magnenat, C.E. Mirbach and J.-P.A. Hobbs, 2016. Reassessing the trophic role of reef sharks as apex predators on coral reefs. Coral Reefs, 35: 459-472.

Galassi, D.M.P., N.L. Bruce, B. Fiasca and M.-J. Dole-Olivier, 2016. A new family Lepidocharontidae with description of Lepidocharon gen. n., from the Great Barrier Reef, Australia, and redefinition of the Microparasellidae (Isopoda, Asellota). ZooKeys, 594: 11-50.

Geange, S.W., D.E. Poulos, A.C. Stier and M.I. McCormick, 2016. The relative influence of abundance and priority effects on colonization success in a coral-reef fish. Coral Reefs, doi 10.1007/s00338-016-1503-3.

Gingins, S., 2016. What makes a cleaner a cleaner? PhD thesis, University of Neuchatel.

Gingins, S. and R. Bshary, 2016. The cleaner wrasse outperforms other labrids in ecologically relevant contexts, but not in spatial discrimination. Animal Behaviour, 115: 145-155.

Goatley, C.H.R., A. González-Cabello and D.R. Bellwood, 2016. Reef-scale partitioning of cryptobenthic fish assemblages across the Great Barrier Reef, Australia. Marine Ecology Progress Series, 544: 271–280.

Gunn, B.F., 2016. Phylogenomics of the coconut (Cocos nucifera L.). PhD thesis, Australian National University.

Hall, A. and M. Kingsford, 2016. Predators exacerbate competitive interactions and dominance hierarchies between two coral reef fishes. PLoS One, doi 10.1371/journal.pone.0151778.

Hall, A.E. and T.D. Clark, 2016. Seeing is believing: metabolism provides insight into threat perception for a prey species of coral reef fish. Animal Behaviour, 115: 117-126.

Heuer, R.M., M.J. Welch, J.L. Rummer, P.L. Munday and M. Grosell, 2016. Altered brain ion gradients following compensation for elevated CO2 are linked to behavioural alterations in a coral reef fish. Scientific Reports, 6: 33216.

Horka, I, C.H.J.M. Fransen and Z. Duri, 2016. Two new species of shrimp of the Indo-West Pacific genus Hamodactylus Holthuis, 1952 (Crustacea: Decapoda: Palaemonidae). European Journal of Taxonomy 188: 1-26.

Huston, D.C., S.C. Cutmore and T.H. Cribb, 2016. The life-cycle of Gorgocephalus yaaji Bray & Cribb, 2005 (Digenea: Gorgocephalidae) with a review of the first intermediate hosts for the superfamily
Lepocreadioidea Odhner, 1905. Systematic Parasitology, 93: 653-665.

Jordan, T.M., D. Wilby, T.-H. Chiou, K.D. Feller, R.L. Caldwell, T.W. Cronin and N.W. Roberts, 2016. A shape-anisotropic reflective polarizer in a stomatopod crustacean. Scientific Reports, 6: 21744.

Kerry, J.T. and D. R. Bellwood, 2016. Competition for shelter in a high-diversity system: structure use by large reef fishes. Coral Reefs, doi: 10.1007/s00338-015-1362-3.

Khan, J.A., J.Q. Welsh and D.R. Bellwood, 2016. Using passive acoustic telemetry to infer mortality events in adult herbivorous coral reef fishes. Coral Reefs, doi: 10.1007/s00338-015-1387-7

Kok, J.E., N.A.J. Graham and M.O. Hoogenboom, 2016. Climate-driven coral reorganisation influences aggressive behaviour in juvenile coral-reef fishes. Coral Reefs, 35: 473-483.

Kramer, M.J., O. Bellwood and D.R. Bellwood, 2016. Foraging and microhabitat use by crustacean-feeding wrasses on coral reefs. Marine Ecology Progress Series, 548: 277-282.

Lee, J.J., M. Cevasco, J. Morales, M. Billick, M. Fine and O. Levy, 2016. Variation among the Marginopora vertebralis collected from the Great Barrier Reef, Australia. Journal of Foraminiferal Research, 46(2): 201-219.

Lienart, G.-D.H., 2016. Effects of temperature and food availability on the antipredator behaviour of coral reef fishes. PhD thesis, James Cook University.

Lienart, G.D.H., M.C.O. Ferrari and M.I. McCormick, 2016. Thermal environment and nutritional condition affect the efficacy of chemical alarm cues produced by prey fish. Environmental Biology of Fishes, 99: 729-739.

McCormick, M.I., 2016. Protogyny in a tropical damselfish: females queue for future benefit. PeerJ, 4: e2198, doi 10.7717/peerj.2198.

McCormick, M.I. and O.M. Loennstedt, 2016. Disrupted learning: habitat degradation impairs crucial antipredator responses in naive prey. Proceedings of the Royal Society B, 283: 20160441.

McCormick, M.I., D.P. Chivers, B.J.M. Allan and M.C.O. Ferrari, 2016. Habitat degradation disrupts neophobia in juvenile coral reef fish. Global Change Biology, doi 10.1111/gcb.13393.

Messias, J.P.M., J.R. Paula, A.S. Grutter, R. Bshary and M.C. Soares, 2016. Dopamine disruption increases negotiation for cooperative interactions in a fish. Scientific Reports, 6: 20817.

Messmer, V., M.S. Pratchett, A.S. Hoey, A.J. Tobin, D.J. Coker, S.J. Cooke and T.D. Clark, 2016. Global warming may disproportionately affect larger adults in a predatory coral reef fish. Global Change Biology, 23: 2230-2240.

Mirbach, C.G. and S.J. Brandl, 2016. Ontogenetic shifts in the social behaviour of pairing coral reef rabbitfishes (Siganidae). Marine Biology Research, doi 10.1080/17451000.2016.1203952.

Munday, P.L., M.J. Welch, B.J.M. Allan, S.-A. Watson, S.J. McMahon and M.I. McCormick, 2016. Effects of elevated CO2 on predator avoidance behaviour by reef fishes is not altered by experimental test water. PeerJ , 4: e2501, doi 10.7717/peerj.2501.

Nadler, L.E., 2016. Behavioural and physiological effects of shoaling in a coral reef fish. PhD thesis, James Cook University, Townsville.

Nadler, L.E., S.S. Killen, E.C. McClure, P.L. Munday and M.I. McCormick, 2016. Shoaling reduces metabolic rate in a gregarious coral reef fish species. Journal of Experimental Biology, 219: 2802-2805.

Nadler, L.E., S.S. Killen, M.I. McCormick, S.-A. Watson and P.L. Munday, 2016. Effect of elevated carbon dioxide on shoal familiarity and metabolism in a coral reef fish. Conservation Physiology, 4: doi 10.1093/conphys/cow052.

Nimbs, M.J., M. Larkin, T.R. Davis, D. Harasti, R.C. Willan and S.D.A. Smith, 2016. Southern range extensions for twelve heterobranch sea slugs (Gastropoda: Heterobranchia) on the eastern coast of Australia. Marine Biodiversity Records, 9: 27.

Nolan, M.J., C. Cantacessi, S.C. Cutmore, T.H. Cribb and T.L. Miller, 2016. High-intensity cardiac infections of Phthinomita heinigerae n. sp. (Digenea: Aporocotylidae) in the orangelined cardinalfish, Taeniamia fucata (Cantor), off Heron Island on the Great Barrier Reef. Parasitology International, 65: 371-377.

Ow, Y.X., N. Vogel, C.J. Collier, J.A.M. Holtum, F. Flores and S. Uthicke, 2016. Nitrate fertilisation does not enhance CO2 responses in two tropical seagrass species. Scientific Reports, 6: 23093.

Palacios, M.M., S.S. Killen, L.E. Nadler, J.R. White and M.I. McCormick, 2016. Top predators negate the effect of mesopredators on prey physiology. Journal of Animal Ecology, doi 10.1111/1365-2656.12523.

Parris, D.J., R.M. Brooker, M.A. Morgan, D.L. Dixson and F.J. Stewart, 2016. Whole gut microbiome composition of damselfish and cardinalfish before and after reef settlement. PeerJ, 4: e2412.

Pereira, P.H.C. and P.L. Munday, 2016. Coral colony size and structure as determinants of habitat use and fitness of coral-dwelling fishes. Marine Ecology Progress Series, 553: 163-172.

Petie, R., A. Garm and M.R. Hall, 2016. Crown-of-Thorns Starfish have true image forming vision. Frontiers in Zoology, 13: 41.

Pichelin, S., L.R. Smales and T.H. Cribb, 2016. A review of the genus Sclerocollum Schmidt & Paperna, 1978 (Acanthocephala: Cavisomidae) from rabbitfishes (Siganidae) in the Indian and Pacific Oceans. Systematic Parasitology, 93: 101-114.

Pisapia, C., K.D. Anderson and M.S. Pratchett, 2016. Temporal consistency in background mortality of four dominant coral taxa along Australia’s Great Barrier Reef. Coral Reefs, 35: 839-849.

Pollock, F.J., N. Wada, G.Torda, B.L. Willis and D.G. Bourne, 2016. White syndrome-affected corals have a distinct microbiome at disease lesion fronts. Applied and Environmental Microbiology, 83(2): e02799-16.

Poulos, D.E., 2016. Priority effects and the dynamics of coral reef fish assemblages. PhD thesis, James Cook University.

Prazeres, M., 2016. Responses of reef-dwelling foraminifera to shifts in water quality and climate change. PhD thesis, University of Queensland.

Prazeres, M. and J.M. Pandolfi, 2016. Effects of elevated temperature on the shell density of the large benthic foraminifera Amphistegina lobifera. Journal of Eukaryotic Microbiology, doi 10.1111/jeu.12325.

Prazeres, M., S. Uthicke and J.M. Pandolfi, 2016. Changing light levels induce photo-oxidative stress and alterations in shell density of Amphistegina lobifera (Foraminifera). Marine Ecology Progress Series, 549: 69-78.

Prazeres, M., S. Uthicke and J.M. Pandolfi, 2016. Influence of local habitat on the physiological responses of large benthic foraminifera to temperature and nutrient stress. Scientific Reports, 6: 21936, doi 10.1038/srep21936.

Purcell, S.W., T.P. Piddocke, S.J. Dalton and Y.-G. Wang, 2016. Movement and growth of the coral reef holothuroids Bohadschia argus and Thelenota ananas. Marine Ecology Progress Series, 551: 201-214.

Roberts, T.E., T.C. Bridge, M.J. Caley and A.H. Baird, 2016. The point count transect method for estimates of biodiversity on coral reefs: improving the sampling of rare species. PLoS One, doi 10.1371/journal.pone.0152335.

Rummer, J.L, S.A. Binning, D.G. Roche and J.L. Johansen, 2016. Methods matter: considering locomotory mode and respirometry technique when estimating metabolic rates of fishes. Conservation Physiology, 4(1): doi 10.1093/conphys/cow008.

Schmidt, C., R. Morard, M. Prazeres, H. Barak and M. Kucera, 2016. Retention of high thermal tolerance in the invasive foraminifera Amphistegina lobifera from the Eastern Mediterranean and the Gulf of Aqaba. Marine Biology, 163: 228, doi 10.1007/s00227-016-2998-4.

Simpson, S.D., A.N. Radford, S. Holles, M.C.O. Ferarri, D.P. Chivers, M.I. McCormick and M.G. Meekan, 2016. Small-boat noise impacts natural settlement behavior of coral reef fish larvae. In: A.N. Popper, A. Hawkins (eds.), The effects of noise on aquatic life II. Springer Science and Business Media, New York.

Simpson, S.D., A.N. Radford, S.L. Nedelec, M.C.O. Ferrari, D.P. Chivers, M.I. McCormick and M.G. Meekan, 2016. Anthropogenic noise increases fish mortality by predation. Nature Communications, 7: 10544.

Stieb, S.M., K.L. Carleton, F. Cortesi, N.J. Marshall and W. Salzburger, 2016. Depth-dependent plasticity in opsin gene expression varies between damselfish (Pomacentridae) species. Molecular Ecology, 25: 3645-3661.

Sun, D., 2016. Parasites and cleaning behaviour in damselfishes. PhD thesis, University of Queensland.

Sun, D., K.L. Cheney, J. Werminghausen, E.C. McClure, M.G. Meekan, M.I. McCormick, T.H. Cribb and A.S. Grutter, 2016. Cleaner wrasse influence habitat selection of young damselfish. Coral Reefs, 35: 427-436.

Triki, Z., A.S. Grutter, R. Bshary and A.F.H. Ros, 2016. Effects of short-term exposure to ectoparasites on fish cortisol and hematocrit levels. Marine Biology, 163: 187.

Vickers, M. and L. Schwarzkopf, 2016. A simple method to predict body temperature of small reptiles from environmental temperature. Ecology and Evolution, 6(10): 3059-3066.

Wacker, S., S. Östlund-Nilsson, E. Forsgren, C. Newport and T. Amundsen, 2016. Mate choice plasticity in a coral reef fish. Behavioral Ecology, 27: 1331-1342.

Wada, N., F.J. Pollock, B.L. Willis, T. Ainsworth, N. Mano and D.G. Bourne, 2016. In situ visualization of bacterial populations in coral tissues: pitfalls and solutions. PeerJ, 4: e2424, doi 10.7717/peerj.2424.

Warner, P.A., B.L. Willis and M.J.H. van Oppen, 2016. Sperm dispersal distances estimated by parentage analysis in a brooding scleractinian coral. Molecular Ecology, 25: 1398-1415.

Wismer, S., A. Grutter, R. Bshary, 2016. Generalized rule application in bluestreak cleaner wrasse (Labroides dimidiatus): using predator species as social tools to reduce punishment. Animal Cognition, 19: 769-778.

Woods, R.M., A.H. Baird, T.L. Mizerek and J.S. Madin, 2016. Environmental factors limiting fertilisation and larval success in corals. Coral Reefs, 35: 1433-1440.

Yong, R.Q.-Y., S.C. Cutmore, T.L. Miller, N.Q.-X. Wee and T.H. Cribb, 2016. A complex of Cardicola Short, 1953 (Digenea: Aporocotylidae) species infecting the milkfish Chanos chanos Forsskal (Gonorynchiformes), with descriptions of two new species. Systematic Parasitology, 93: 831-846.

Zanol, J., T. dos S.C. da Silva and P. Hutchings, 2016. Marphysa (Eunicidae, polychaete, Annelida) species of the Sanguinea group from Australia, with comments on pseudo-cryptic species. Invertebrate Biology, 135(4): 328-344.

Zimmermann, J., C. Wentrup, M. Sadowski, A. Blazejak, H.R. Gruber-Vodicka, M. Kleiner, J.A. Ott, B. Cronholm, P. De Wit, C. Erseus and N. Dubilier, 2016. Closely coupled evolutionary history of ecto- and endosymbionts from two distantly related animal phyla. Molecular Ecology, 25: 3203-3223.


2015 LIRS publications: 122

Aguado, M.T. and C.J. Glasby, 2015. Indo-Pacific Syllidae (Annelida, Phyllodocida) share an evolutionary history. Systematics and Biodiversity, 13(4): 369-385.

Aguado, M.T., A. Murray and P. Hutchings, 2015. Syllidae (Annelida: Phyllodocida) from Lizard Island, Great Barrier Reef, Australia. Zootaxa, 4019(1): 35-60.

Aguado, M.T., C. Helm, M. Weidhase and C. Bleidorn, 2015. Description of a new syllid species as a model for evolutionary research of reproduction and regeneration in annelids. Organisms, Diversity and Evolution, 15: 1-21.

Aguado, M.T., C.J. Glasby, P.C. Schroeder, A. Weigert and C. Bleidorn, 2015. The making of a branching annelid: an analysis of complete mitochondrial genome and ribosomal data of Ramisyllis multicaudata. Scientific Reports, 5: doi10.1038/srep12072.

Allan, B.J.M., 2015. The effects of climate change on predator-prey interactions in coral reef fish. PhD thesis, James Cook University.

Álvarez-Campos, A. Riesgo, P. Hutchings and G. San Martin, 2015. The genus Syllis Savigny in Lamarck, 1818 (Annelida, Syllidae) from Australia. Molecular analysis and re-description of some poorly-known species. Zootaxa, 4052(2): 297-31.

Alvestad, T. and N. Budaeva, 2015. Neosabellides lizae, a new species of Ampharetidae (Annelida) from Lizard Island, Great Barrier Reef, Australia. Zootaxa, 4019(1): 61-69.

Baldock, T.E., A. Golshani, A. Atkinson, T. Shimamoto, S. Wua, D.P. Callaghan and P.J. Mumby, 2015. Impact of sea-level rise on cross-shore sediment transport on fetch-limited barrier reef island beaches under modal and cyclonic conditions. Marine Pollution Bulletin, 97: 188-198.

Binning, S.A. and D.G. Roche, 2015. Water flow and fin shape polymorphism in coral reef fishes. Ecology, 96(3): 828-839.

Binning, S.A., A.F.H. Ros, D. Nusbaumer and D.G. Roche, 2015. Physiological plasticity to water flow habitat in the damselfish, Acanthochromis polyacanthus: linking phenotype to performance. PLOS One, doi:10.1371/journal.pone.0121983.

Boaden, A. and M.J. Kingsford, 2015. Predators drive community structure in coral reef fish assemblages. Ecosphere, 6(4): 1-33.

Bogdanov, A., C. Hertzer, S. Kehraus, S. Nietzer, S. Rohde, P.J. Schupp, H. Wa¨gele and G.M. Ko¨nig, 2015. Defensive diterpene from the aeolidoidean Phyllodesmium longicirrum. Journal of Natural Products, 79: 611−615.

Boggemann, M., 2015. Glyceriformia Fauchald, 1977 (Annelida: "Polychaeta") from Lizard Island, Great Barrier Reef, Australia. Zootaxa, 4019(1): 070-097.

Bok, M.J., M.L. Porter and T.W. Cronin, 2015. Ultraviolet filters in stomatopod crustaceans: diversity, ecology and evolution. The Journal of Experimental Biology, 218: 2055-2066.

Bostrom-Einarsson, L. and J. Rivera-Posada, 2015. Controlling outbreaks of the coral-eating crown-of-thorns starfish using a single injection of common household vinegar. Coral Reefs, doi:10.1007/s00338-015-1351-6.

Brandl, S.J., W.D. Robbins and D.R. Bellwood, 2015. Exploring the nature of ecological specialization in a coral reef fish community: morphology, diet and foraging microhabitat use. Proceedings of the Royal Society B, 282: 20151147.

Braun, C., 2015. UV-induced DNA damage in coral reef fish: damage levels and protection mechanisms. PhD thesis, University of Queensland.

Bruce, N.L., 2015. Joeropsididae Nordenstam, 1933 (Crustacea, Isopoda, Asellota) from the Lizard Island region of the Great Barrier Reef, Queensland, Australia. Zookeys, 491: 1-62.

Bruce, N.L. and R.L. Cumming, 2015. A new genus of Stenetriidae Hansen, 1905 (Asellota: Isopoda: Crustacea) from the Great Barrier Reef, Australia and the southwestern Pacific. Zootaxa, 3941(4): 485-508.

Bshary, R. and R.F. Oliveira, 2015. Cooperation in animals: toward a game theory within the
framework of social competence. Current Opinion in Behavioral Sciences, 3: 31-37.

Callaghan, D.P., J. X. Leon and M.I. Saunders, 2015. Wave modelling as a proxy for seagrass ecological modelling: Comparing fetch and process-based predictions for a bay and reef lagoon. Estuarine, Coastal and Shelf Science, 153: 108-120.

Capa, M. and A. Murray, 2015. A taxonomic guide to the fanworms (Sabellidae, Annelida) of Lizard Island, Great Barrier Reef, Australia, including new species and new records. Zootaxa, 4019(1): 98-167.

Capa, M. and A. Murray, 2015. Integrative taxonomy of Parasabella and Sabellomma (Sabellidae: Annelida) from Australia: description of new species, indication of cryptic diversity, and translocation of some species out of their natural distribution range. Zoological Journal of the Linnean Society, 175: 764-811.

Capa, M. and G. W. Rouse, 2015. Sphaerodoridae (Annelida) from Lizard Island, Great Barrier Reef, Australia, including the description of two new species and reproductive notes. Zootaxa, 4019(1): 168-183.

Capa, M., Faroni-Perez, L. and P. Hutchings, 2015. Sabellariidae from Lizard Island, Great Barrier Reef, including a new species of Lygdamis and notes on external morphology of the median organ. Zootaxa, 4019(1): 184-206.

Capa, M., M.T. Aguado and T. Bakken, 2015. Phylogenetic hypothesis of Sphaerodoridae Malmgren, 1867 (Annelida) and its position within Phyllodocida. Cladistics, 2015: 1-16.

Cardoso, S.C.C., 2015. The role of neuropeptides on the modulation of mutualistic behaviour of the Indo-Pacific Cleaner Wrasse (Labroides dimidiatus). PhD thesis, Unversidade do Algarve.

Cardoso, S.C., A.S. Grutter, J.R. Paula, G.I. André , J.P. Messias, M. Gozdowsk, E. Kulczykowska and M.C. Soares, 2015. Forebrain neuropeptide regulation of pair association and behavior in cooperating cleaner fish. Physiology and Behavior, 145: 1-7.

Casey, J.M., 2015. The role of territorial grazers in coral reef trophic dynamics from microbes to apex predators. PhD thesis, James Cook University.

Casey, J.M., S.R. Connolly and T.D. Ainsworth, 2015. Coral transplantation triggers shift in microbiome and promotion of coral disease associated potential pathogens. Scientific Reports, 5: 11903.

Christa., G., K. Händeler, P. Kück, M. Vleugels, J. Franken, D. Karmeinski and H. Wägele, 2015. Phylogenetic evidence for multiple independent origins of functional kleptoplasty in Sacoglossa (Heterobranchia, Gastropoda). Organisms, Diversity and Evolution, 15: 23-26.

Coker, D.J., A.S. Hoey, S.K. Wilson, M. Depczynski, N.A.J. Graham, J.-P.A. Hobbs, T.H. Holmes and M.S.. Pratchett, 2015. Habitat selectivity and reliance on live corals for Indo-Pacific hawkfishes (Family: Cirrhitidae). PLoS One, doi.1371/journal.pone.0138136.

Cortesi, F., W.E. Feeney, M.C.O. Ferrari, P.A. Waldie, G.A.C. Phillips, E.C. McClure, H.N. Skold, W. Salzburger, N.J. Marshall and K.L. Cheney, 2015. Phenotypic plasticity confers multiple fitness benefits to a mimic. Current Biology, 25: 1-6.

Cortesi, F., Z. Musilová, S.M. Stieb, N.S. Hart, U.E. Siebeck, M. Malmstrøm, O.K. Tørresen, S. Jentoft, K.L. Cheney, N.J. Marshall, K.L. Carleton and W.Salzburger, 2015. Ancestral duplications and highly dynamic opsin gene evolution in percomorph fishes, PNAS, 112(5): 1493-1498.

Cribb, T.H., R.A. Bray, K.A. Hall and S.C. Cutmore, 2015. A review of the genus Antorchis Linton, 1911 (Trematoda: Faustulidae) from Indo-Pacific fishes with the description of a new species. Systematic Parasitology, 92: 1-11.

De Matos Nogueira, J.M., P. Hutchings and O. Carrerette, 2015. Terebellidae (Annelida, Terebelliformia) from Lizard Island, Great Barrier Reef, Australia. Zootaxa, 4019(1): 484-576.

De Matos Nogueira, J.M., P. Hutchings and O. Carrerette, 2015. Polycirridae (Annelida, Terebelliformia) from Lizard Island, Great Barrier Reef, Australia. Zootaxa, 4019(1): 437-483.

De Matos Nogueira, J.M., P. Hutchings and O. Carrerette, 2015. Varanusia nom. nov., a replacement name for Lizardia Nogueira, Hutchings & Carrerette, 2015 (Annelida: Terebellidae), preoccupied by Lizardia Pleijel & Rouse, 2005. Zootaxa, 4058(1): 141-141.

Diaz, P.E., R.A. Bray, S.C. Cutmore, S. Ward and T.H. Cribb, 2015. A complex of species related to Paradiscogaster glebulae (Digenea: Faustulidae) in chaetodontid fishes (Teleostei: Perciformes) of the Great Barrier Reef. Parasitology International, 64: 421–428.

Eckes, M., S. Dove, U.E. Siebeck and A.S. Grutter, 2015. Fish mucus versus parasitic gnathiid isopods as sources of energy and sunscreens for a cleaner fish. Coral Reefs, 34: 823-833.

Feller, K.D., J.H. Cohen and T.W. Cronin, 2015. Seeing double: visual physiology of double-retina eye ontogeny in stomatopod crustaceans. Journal of Comparative Physiology A, 201: 331-339.

Ferrari, M.C.O., M.I. McCormick, B.J.M. Allan, R. Choi, R.A. Ramasamy, J.L. Johansen, M.D. Mitchell and D.P. Chivers, 2015. Living in a risky world: the onset and ontogeny of an integrated antipredator phenotype in a coral reef fish. Scientific Reports, 5: 15537.

Ferrari, M.C.O., M.I. McCormick,.B.J.M. Allan,.R.B. Choi, R.A. Ramasamy.and D.P. Chivers, 2015. The effects of background risk on behavioural lateralization in a coral reef fish. Functional Ecology, 29: 1553–1559.

Ferrari, M.C.O., P.L. Munday, J.L.. Rummer, M.I. McCormick, K. Corkill, S.-A. Watson, B.J.M. Allan, M.G. Meekan and D.S.P. Chivers, 2015. Interactive effects of ocean acidification and rising sea temperatures alter predation rate and predator selectivity in reef fish communities. Global Change Biology, 21: 1848-1855.

Fitzhugh, K., J.M. de Matos Noguiera, O. Carerette and P. Hutchings, 2015. An assessment of the status of Polycirridae genera (Annelida: Terebelliformia) and evolutionary transformation series of characters within the family. Zoological Journal of the Linnean Society, doi: 10.1111/zoj.12259.

Fitzpatrick, A., 2015. Stone arrangements in the Lizard Island Group: a study of indigenous seascapes in Northeastern Australia. Honours thesis, James Cook University.

Gagliano, M., M. Depczynski and U.E. Siebeck, 2015. Facing the environment: onset and development of UV markings in young fish. Scientific Reports, 5: 13193.

Gagnon, Y.L., R.M. Templin, M.J. How and N.J. Marshall, 2015. Circularly polarized light as a communication signal in mantis shrimps. Current Biology, 25: 3074-3078.

Glasby, C. J., 2015. Nereididae (Annelida: Phyllodocida) of Lizard Island, Great Barrier Reef, Australia. Zootaxa, 4019(1): 207-239.

Gunn, B.F., L. Baudouin, T. Beulé, P. Ilbert, C. Duperray, M. Crisp, A. Issali, J.-L. Konan and A. Rival, 2015. Ploidy and domestication are associated with genome size variation in palms. American Journal of Botany, 102(10): 1625-1633.

Hall, A.E., 2015. Top-down control, trophic interactions, and the importance of predatory interactions on coral reefs. PhD thesis, James Cook University.

Hamylton, S.M., J.D. Hedley and R.J. Beaman, 2015. Derivation of high-resolution bathymetry from multispectral satellite imagery: a comparison of empirical and optimisation methods through geographical error analysis. Remote Sensing, 7(12): 16257-16273.

Hata, T., 2015. Measuring and recreating hydrodynamic environments at biologically relevant scales. PhD thesis, Stanford University.

Holbrook, S.J., R.J. Schmitt, V. Messmer, A.J. Brooks, M. Srinivasan, P.L. Munday and G.P. Jones, 2015. Reef fishes in biodiversity hotspots are at greatest risk from loss of coral species. PLOS One, doi 10.1371/journal.pone.0124054.

Hutchings, P. and E. Kupriyanova, 2015. Polychaetes and allies of Lizard Island. Zootaxa, 4019(1): 1-6.

Hutchings, P., de Matos Nogueira, J. M. and Carrerette, O., 2015. Telothelepodidae, Thelepodidae and Trichobranchidae (Annelida, Terebelliformia) from Lizard Island, Great Barrier Reef, Australia. Zootaxa, 4019(1): 240-274.

Irisson, J.-O., C.B. Paris, J.M. Leis, M.N. Yerman, 2015. With a little help from my friends: group orientation by larvae of a coral reef fish. PLOS One, doi: 10.1371/journal.pone.0144060.

Johnson, J.W. and J. Worthington Wilmer, 2015. Plectorhinchus caeruleonothus, a new species of sweetlips (Perciformes: Haemulidae) from northern Australia and the resurrection of P. unicolor
(Macleay, 1883), species previously confused with P. schotaf (Forsskål, 1775). Zootaxa, 3985(4): 491-522.

Jornod, M. and D.G. Roche, 2015. Inter- vs intra-individual variation and temporal repeatability of escape responses in the coral reef fish Amblyglyphidodon curacao. Biology Open, 4: 1395-1399.

Keith, S.A., E.S. Woolsey , J.S. Madin , M. Byrne and A.H. Baird, 2015. Differential establishment potential of species predicts a shift in coral assemblage structure across a biogeographic barrier. Ecography, 38, doi: 10.1111/ecog.01437.

Kerry, J.T. and D.R. Bellwood, 2015. The functional role of tabular structures for large reef fishes: avoiding predators or solar irradiance? Coral Reefs, 34: 693-702.

Kingston, A.C.N., A.M. Kuzirian, R.T. Hanlon and T.W. Cronin, 2015. Visual phototransduction components in cephalopod chromatophores suggest dermal photoreception. The Journal of Experimental Biology, 218: 1596-1602.

Kramer, M.J., 2015. Crustacea on coral reefs: habitat associations and trophic relationships. PhD thesis, James Cook University.

Kroon, F.J., S.E. Hook, D. Jones, S. Metcalfe, B. Henderson, R. Smith, M. St.J. Warne, R.D. Turner,
A. McKeown and D.A. Westcott, 2015. Altered transcription levels of endocrine associated genes in two fisheries species collected from the Great Barrier Reef catchment and lagoon. Marine Environmental Research, 104: 51-61.

Kupriyanova, E. K., Sun, Y., Ten Hove, H. A., Wong, E. and G. W. Rouse, 2015. Serpulidae (Annelida) of Lizard Island, Great Barrier Reef, Australia. Zootaxa, 4019(1): 275-353.

Lefèvre, C.D. and D.R. Bellwood, 2015. Disturbance and recolonisation by small reef fishes: the role of local movement versus recruitment. Marine Ecology Progress Series, 537: 205-215.

Lefevre, S., S.-A. Watson, P.L. Munday and G.E. Nilsson, 2015. Will jumping snails prevail? Influence of near-future CO2, temperature and hypoxia on respiratory performance in the tropical conch Gibberulus gibberulus gibbosus. Journal of Experimental Biology, 218: 2991-3001.

Leis, J.M., 2015. Is dispersal of larval reef fishes passive? in Ecology of Fishes on Coral Reefs, ed. C. Mora. Cambridge University Press.

Leis, J.M., O. Meyer, A.C. Hay and M.R. Gaither, 2015. A coral-reef fish with large, fast conspicuous larvae and small, cryptic adults (Teleostei: Apogonidae). Copeia, 103(1): 78-86.

Leis, J.M., U.E. Siebeck, A.C. Hay, C.B. Paris, O. Chateau and L. Wantiez, 2015. In situ orientation of fish larvae can vary among regions. Marine Ecology Progress Series, 537: 191-203.

Liggins, L., E.A. Treml, H.P. Possingham and C. Riginos, 2015. Seascape features, rather than dispersal traits, predict spatial genetic patterns in co-distributed reef fishes. Journal of Biogeography, doi: 10.1111/jbi.12647.

Lonnstedt, O.M. and M.I. McCormick, 2015. Damsel in distress: captured damselfish prey emit chemical cues that attract secondary predators and improve escape chances. Proceedings of the Royal Society B, 282: 20152038.

Marquina, D., Aguado, M. T. and C. Norena, 2015. New records of Cotylea (Polycladida, Platyhelmenthes) from Lizard Island, Great Barrier Reef, Australia, with remarks on the distribution of the Pseudoceros Lang, 1884 and Pseudobiceros Faubel, 1984 species of the Indo-Pacific Marine Region. Zootaxa, 4019(1): 354-377.

McLeod, I.M., M.I. McCormick, P.L. Munday, T.D. Clark, A.S. Wenger, R.M. Brooker, M. Takahashi and G.P. Jones, 2015. Latitudinal variation in larval development of coral reef fishes: implications of a warming ocean. Marine Ecology Progress Series, 521: 129-141.

McLeod, I.M., R..E. Jones, G.P. Jones, M. Takahashi and M.I. McCormick, 2015. Interannual variation in the larval development of a coral reef fish in response to temperature and associated environmental factors. Marine Biology, doi: 10.1007/s00227-015-2765-y.

Meißner, K. and M. Götting, 2015. Spionidae (Annelida: 'Polychaeta': Canalipalpata) from Lizard Island, Great Barrier Reef, Australia: the genera Malacoceros, Scolelepis, Spio, Microspio, and Spiophanes. Zootaxa, 4019(1): 378-413.

Mejlon, E., P. De Wit, L. Matamoros and C. Erseus, 2015. DNA-based phylogeny of the marine genus Heterodrilus (Annelida, Clitellata, Naididae). Journal of Zoological Systematics and Evolutionary Research, doi: 10.1111/jzs.12092.

Messias, J.P.M. and M.C. Soares, 2015. When good advertisement backfires: cleaners get eaten too. Coral Reefs, 34: 1279.

Mitchell, M.D., D.P. Chivers, M.I. McCormick and M.C.O. Ferrari, 2015. Learning to distinguish between predators and non-predators: understanding the critical role of diet cues and predator odours in generalisation. Scientific Reports, 5: 13918.

Murray, A., Wong, E. and P. Hutchings, 2015. Nephtydae (Annelida: Phyllodocida) of Lizard Island, Great Barrier Reef, Australia. Zootaxa, 4019(1): 414-436.

Navarro-Barranco, C. and L.E. Hughes, 2015. Effects of light pollution on the emergent fauna of shallow marine ecosystems: Amphipods as a case study. Marine Pollution Bulletin, 94: 235-240.

Nay, T.J., J.L. Johansen, A. Habary, J.F. Steffensen and J.L. Rummer, 2015. Behavioural thermoregulation in a temperature-sensitive coral reef fish, the five-lined cardinalfish (Cheilodipterus quinquelineatus). Coral Reefs, 34: 1261-1265.

Ness, M.H., 2015. The effect of body size on intrasexual competition in the coral reef fish Chrysiptera cyanea. MSc thesis, Norwegian University of Science and Technology.

Nolan, M.J., S.S. Curran, T.L. Miller, S.C. Cutmore, C. Cantacessi and T.H. Cribb, 2015. Dollfustrema dura n. sp. and Heterobucephalopsis perarduum n. sp. (Digenea: Bucephalidae) from the giant moray eel, Gymnothorax javanicus (Bleeker) (Anguilliformes: Muraenidae), and proposal of the Heterobucephalopsinae n. subfam. Parasitology International., 64(6): 559-570.

Palacios, M.M., D.T. Warren and M.I. McCormick, 2015. Sensory cues of a top-predator indirectly control a reef fish mesopredator. Oikos, doi: 10.1111/oik.02116.

Parapar, J. and Moreira, J., 2015. The Oweniidae (Annelida: Polychaeta) from Lizard Island (Great Barrier Reef, Australia) with the description of two new species of Owenia Delle Chiaje, 1844. Zootaxa, 4019(1): 604-620.

Parapar, J. and Moreira, J., 2015. Six new species of the genus Armandia, Filippi 1861 (Polychaeta, Opheliidae) from Lizard Island (Great Barrier Reef, Australia). Zootaxa, 4019(1): 577-603.

Paula, J.R. J.P. Messias, A.S. Grutter, R. Bshary and M.C. Soares, 2015. The role of serotonin in the modulation of cooperative behavior. Behavioral Ecology, doi: 10.1093/beheco/arv039.

Paxton, H. and N. Budaeva, 2015. Minibrachium, a new subgenus of Rhamphobrachium (Annelida: Onuphidae) from Australia with the description of three new species. Zootaxa, 4019(1): 621-634.

Pereira, P.H.C., 2015. Competition and habitat selection in coral-dwelling fishes. PhD thesis, James Cook University.

Pereira, P.H.C., P.L. Munday and G.P. Jones, 2015. Competitive mechanisms change with ontogeny in coral-dwelling gobies. Ecology, 96(11): 3090-3101.

Piercy, J.J.B., 2015. The relevance of coral reef soundscapes to larval fish responses. PhD thesis, University of Essex.

Pink, J.R. and C.J. Fulton, 2015. Fin spotting: efficacy of manual and video-based visual assessments of reef fish swimming behaviour. Journal of Experimental Marine Biology and Ecology, 465: 92-98.

Pisapia, C., 2015. Spatial, temporal and taxonomic variation in the incidence of partial mortality among reef-building corals. PhD thesis, James Cook University.

Pisapia, C., M. Sweet, H. Sweatman and M.S Pratchett, 2015. Geographically conserved rates of background mortality among common reef-building corals in Lhaviyani Atoll, Maldives, versus northern Great Barrier Reef, Australia. Marine Biology, doi: 10.1007/s00227-015-2694-9.

Poulos, D.E. and M.I. McCormick, 2015. Asymmetries in body condition and order of arrival influence competitive ability and survival in a coral reef fish. Oecologia, 179: 719-728.

Pratchett, M.S., S.A. Blowes, D. Coker, E. Kubacki, J. Nowicki and A. S. Hoey, 2015. Indirect benefits of high coral cover for non-corallivorous butterflyfishes. Coral Reefs, doi: 10.1007/s00338-014-1254-y.

Radashevsky, V. I., 2015. Spionidae (Annelida) from Lizard Island, Great Barrier Reef, Australia: the genera Aonides, Dipolydora, Polydorella, Prionospio, Pseudopolydora, Rhynchospio, and Tripolydora. Zootaxa, 4019(1): 635-694.

Ramasamy, R.A., B.J.M. Allan and M.I. McCormick, 2015. Plasticity of escape responses: prior predator experience enhances escape performance in a coral reef fish. PLoS One, doi: 10.1371/journal.pone.0132790.

Ribas, J. and P. Hutchings, 2015. Lizard Island Polychaete Workshop: sampling sites and a checklist of polychaetes. Zootaxa, 4019(1): 7-34.

Rizzari, J.R., 2015. Trophic impact of large predators on coral reefs and management implications. PhD thesis, James Cook University.

Rouse, G.W., D. Lanterbecq, M.M. Summers & I. Eeckhaut, 2015. Four new species of Mesomyzostoma (Myzostomida: Annelida). Journal of Natural History, 50: 1-23.

Saunders, M.I., E. Bayraktarov, C.M. Roelfsema, J. X. Leon, J. Samper-Villarreal, S.R. Phinn, C.E. Lovelock and P.J. Mumby, 2015. Spatial and temporal variability of seagrass at Lizard Island, Great Barrier Reef. Botanica Marina, 58(1): 35-49.

Schulze, A., 2015. Six genetically distinct clades of Palola (Eunicidae, Annelida) from Lizard Island, Great Barrier Reef, Australia. Zootaxa, 4019(1): 695-706.

Schweinsberg, M., L.C. Weiss, S. Striewski, R. Tollrian and K.P. Lampert, 2015. More than one genotype: how common is intracolonial genetic variability in scleractinian corals? Molecular Ecology, 24: 2673-2685.

Siboni, N., D. Abrego, C. Evenhuis, M. Logan and C.A. Motti, 2015. Adaptation to local thermal regimes by crustose coralline algae does not affect rates of recruitment in coral larvae. Coral Reefs, 34: 1243-1253.

Siebeck, U.E., J. O'Connor, C. Bruan and J.M. Leis, 2015. Do human activities influence survival and orientation abilities of larval fishes in the ocean? Integrative Zoology, 10: 65-82.

Stella, J., 2015. Effects of climate change-induced thermal stress and habitat degradation to the biodiversity and species composition of coral-associated invertebrates. PhD thesis, James Cook University.

Sun, D., K.L. Cheney, J. Werminghausen, M.G. Meekan, M.I. McCormick, T.H. Cribb and A.S. Grutter, 2015. Presence of cleaner wrasse increases the recruitment of damselfishes to coral reefs. Biology Letters, 11: 20150456.

Trieu, N., S.C. Cutmore, T.L. Miller and T.H. Cribb, 2015. A species pair of Bivesicula Yamaguti, 1934 (Trematoda: Bivesiculidae) in unrelated Great Barrier Reef fishes: implications for the basis of speciation in coral reef fish trematodes. Systematic Parasitology, 91: 231-239.

Warner, P.A., M.J.H. Van Oppen and B.L. Willis, 2015. Unexpected cryptic species diversity in the widespread coral Seriatopora hystrix masks spatial-genetic patterns of connectivity. Molecular Ecology, 24: 2993–3008.

Watson, C., 2015. Seven new species of Paleanotus (Annelida: Chrysopetalidae) described from Lizard Island, Great Barrier Reef, and coral reefs of northern Australia and the Indo-Pacific: two cryptic species pairs revealed between western Pacific Ocean and the eastern Indian Ocean. Zootaxa, 4019(1): 707-732.

Welsh, J.Q. and D.R. Bellwood, 2015. Simulated macro-algal outbreak triggers a large-scale response on coral reefs. PLoS One, doi:10.1371/journal.pone.0132895.

White, J.R., 2015. The role of boldness and other personality traits in the ecology of juvenile marine fishes. PhD thesis, James Cook University.

White, J.R., M.G. Meekan and M.I. McCormick, 2015. Individual consistency in the behaviors of newly-settled reef fish. PeerJ, 3: e961, doi: 10.7717/peerj.961.

Willette, D.A., A.R. Iniguez, E.K. Kupriyanova, C.J. Starger, T. Varman, A.H.Toha, B.A. Maralit and P.H. Barber, 2015. Christmas tree worms of Indo-Pacific coral reefs: untangling the Spirobranchus corniculatus (Grube, 1862) complex. Coral Reefs, doi: 10.1007/s00338-015-1294-y.

Winkler, N.S., J.M. Pandolfi and E.M. Sampayo, 2015. Symbiodinium identity alters the temperature-dependent settlement behaviour of Acropora millepora coral larvae before the onset of symbiosis. Proceedings of the Royal Society B, 282: 20142260.

Winterbottom, R. and D.F. Hoese, 2015. A revision of the Australian species of Trimma (Actinopterygii, Gobiidae), with descriptions of six new species and redescriptions of twenty-three valid species. Zootaxa, 3934(1): 1-102.

Wong, E. and P. Hutchings, 2015. New records of Pectinariidae (Polychaeta) from Lizard Island, Great Barrier Reef, Australia and the description of two new species. Zootaxa, 4019(1): 733-744.

Woolsey, E.S., S.A. Keith, M. Byrne, S. Schmidt-Roach and A. H. Baird, 2015. Latitudinal variation in thermal tolerance thresholds of early life stages of corals. Coral Reefs, 34: 471-478.

Zanol, J. and C. Ruta, 2015. Now and previously known species of Oenonidae (Polychaeta: Annelida) from Lizard Island, Great Barrier Reef, Australia. Zootaxa, 4019(1): 745-772.

Zhadan, A., Stupnikova, A. and T. Neretina, 2015. Orbiniidae (Annelida: Errantia) from Lizard Island, Great Barrier Reef, Australia with notes on orbiniid phylogeny. Zootaxa, 4019(1): 773-801.


LIRS publications in 2014: 110

Aird, S.M. 2014. Assessing mid-to-late Holocene predation of Conomurex luhuanus and Tectus niloticus at Lizard Island, Northeastern Australia. Honours thesis, James Cook University.

Baeza, J.A., R.T. Brauer, J. Okuno and M. Thiel, 2014. Molecular phylogeny of hinge-beak shrimps (Decapoda: Caridea: Rhynchocinetes and Cinetorhynchus) and allies: a formal test of familiar and generic monophyly using a multilocus phylogeny. Zoological Journal of the Linnean Society, 172: 426-450.

Baldock, T. E., A.Golshani, D.P. Callaghan, M.I. Saunders and P. Mumby, 2014. Impact of sea-level rise and coral mortality on the wave dynamics and wave forces on barrier reefs. Marine Pollution Bulletin, 83: 155-164

Belton, G.S., W.F. Prudhomme van Reine, J. Huisman, S.G.A. Dreisma and C.F.D. Gurgel, 2014. Resolving phenotypic plasticity and species designation in the morphologically challenging Caulerpa racemosa-peltata complex (Caulerpaceae, Chlorophyta). Journal of Phycology, doi: 10.1111/jpy.12132

Binning, S.A., 2014. The effects of biotic and abiotic factors on fish swimming performance. PhD thesis, Australian National University.

Binning, S.A. and D.G. Roche, 2014. Localised intraspecific variation in the swimming phenotype of a coral reef fish across different wave exposures. Oecologia, 174: 623-630.

Binning, S.A., J.I. Barnes, J.N. Davies, P.R.Y. Backwell, J.S. Keogh and D.G. Roche, 2014. Ectoparasites modify escape behaviour, but not performance, in a coral reef fish. Animal Behaviour, 93: 1-7.

Blanco, M.M. and S.N. Patek, 2014. Muscle trade-offs in a power-amplified prey capture system. Evolution, 68: 1399-1414.

Bogdanov, A., S. Kehraus, S. Bleidissel, G. Preisfeld, D. Schillo, J. Piel, A.O. Brachmann, H. Wägele and G.M. König, 2014. Defense in the aeolidoidean genus Phyllodesmium (Gastropoda). Journal of Chemical Ecology, 40: 1013-1024

Bosiger, Y.J. and M.I. McCormick, 2014. Temporal links in daily activity patterns between coral reef predators and their prey. PLoS ONE 9(10): e111723

Brandl, S.J. and D.R. Bellwood, 2014. Individual-based analyses reveal limited functional overlap in a coral reef fish community. Journal of Animal Ecology, 83: 661-670.

Bray, R.A., T.H. Cribb, A. Waeschenbach and D.T.J. Littlewood, 2014. Molecular evidence that the genus Cadenatella Dollfus, 1946 (Digenea: Plagiorchiida) belongs in the superfamily Haploporoidea Nicoll, 1914. Systematic Parasitology, 89: 15-21.

Brooker, R.M.R., 2014. Determinants of resource specialisation and its ecological consequences for the corallivorous filefish, Oxymonacanthus longirostris. PhD thesis, James Cook University.

Brooker, R.M., P.L. Munday, D.P. Chivers and G.P. Jones, 2014. You are what you eat: diet-induced chemical crypsis in a coral-feeding reef fish. Proceedings of the Royal Society B, 282: 20141887.

Capa, M., A. Giangrande, J.M. de M. Nogueira and M.A.Tovar-Hernández, 2014. Sabellidae Latreille, 1825, in Handbook of Zoology: A natural history of the Phyla of the Animal Kingdom, W. Westheide and G. Purschke (eds.), Handbook of Zoology Online.

Casey, J.M., T.D. Ainsworth, J.H. Choat and S.R. Connolly, 2014. Farming behaviour of reef fishes increases the prevalence of coral disease associated microbes and black band disease. Proceedings of the Royal Society B, 281: 20141032.

Casey, J.M., J.H. Choat and S.R. Connolly, 2014. Coupled dynamics of territorial damselfishes and juvenile corals on the reef crest. Coral Reefs, doi 10.1007/s00338-014-1221-7.

Champ, C., G. Wallis, M. Vorobyev, U. Siebeck and J. Marshall, 2014. Visual acuity in a species of coral reef fish: Rhinecanthus aculeatus. Brain, Behaviour and Evolution, 83: 31-42.

Cheney, K.L., A.S. Grutter and R. Bshary, 2014. Geographical variation in the benefits obtained by a coral reef fish mimic. Animal Behaviour, 88: 85-90.

Cheney, K.L., F. Cortesi, M.J. How, N.G. Wilson, S.P. Blomberg, A.E. Winters, S. Umanzor and N.J. Marshall, 2014. Conspicuous visual signals do not coevolve with increased body size in marine sea slugs
Journal of Evolutionary Biology, 27: 676-687.

Chivers, D. P., M.I. McCormick, M.D. Mitchell, R.A. Ramasamy and M.C. Ferrari, 2014. Background level of risk determines how prey categorize predators and non-predators. Proceedings of the Royal Society B, 281: 20140355.

Chivers, D.P., R.A. Ramasamy, M.I. McCormick, S.-A. Watson, U.E. Siebeck and M.C.O. Ferrari, 2014. Temporal constraints on predation risk assessment in a changing world. Science of the Total Environment, 500-501: 332-338.

Christa, G., K. Haendeler, T.F. Schaberle, G.M. Konig and H. Wagele, 2014. Identification of sequestered chloroplasts in photosynthetic and non-photosynthetic sacoglossan sea slugs (Mollusca, Gastropoda).
Frontiers in Zoology, 11: 15 pages.

Chung, W.-S., N.J. Marshall, S.-A. Watson, P.L. Munday and G.E. Nilsson, 2014. Ocean acidification slows retinal function in a damselfish through interference with GABAA receptors. Journal of Experimental Biology, 217: 323-326.

Coker, D. J., J.P. Nowicki and M.S. Pratchett, 2014. Body condition of the coral-dwelling fish Dascyllus aruanus (Linnaeus 1758) following host colony bleaching. Environmental Biology of Fishes, doi 10.1007/s10641-014-0277-0

Cole, A.J., R.J. Lawton, C. Pisapia and M.S. Pratchett, 2014. The effects of coral bleaching on settlement preferences and growth of juvenile butterflyfishes. Marine Environmental Research, 98:106-110.

Cooke, S.J., V. Messmer, A.J. Tobin, M.S. Pratchett and T.D. Clark, 2014. Refuge-seeking impairments mirror metabolic recovery following fisheries-related stressors in the Spanish Flag Snapper (Lutjanus carponotatus) on the Great Barrier Reef. Physiological and Biochemical Zoology, 87(1): 136-147.

Corkill, K., 2014. Interference competition indirectly and directly affects body shape. Honours thesis, James Cook University.

Cortesi, F., 2014. Ecological and molecular insights into the function of colourful signals in aquatic environments. PhD thesis, University of Basel.

Cribb, T.H., N.J. Bott, R.A. Bray, M.K.A. McNamara, T.L. Miller, M.J. Nolan and S.C. Cutmore, 2014. Trematodes of the Great Barrier Reef, Australia: emerging patterns of diversity and richness in coral reef fishes. International Journal for Parasitology, 44: 929-939.

Cribb, T.H., R.D. Adlard, R.A. Bray, P. Sasal and S.C. Cutmore, 2014. Biogeography of tropical Indo-West Pacific parasites: A cryptic species of Transversotrema and evidence for rarity of Transversotrematidae (Trematoda) in French Polynesia. Parasitology International, 63: 285-294.

Cronin, T.W., M.J. Bok, J.N. Marshall and R.L. Caldwell, 2014. Filtering and polychromatic vision in mantis shrimps: themes in visible and ultraviolet vision. Philosophical Transactions of the Royal Society B, 369: 20130032.

Diaz-Pulido, G., M.C. Nash, K.R.N. Anthony, D. Bender, B.N. Opdyke, C. Reyes-Nivia and U. Troitzsch, 2014. Greenhouse conditions induce mineralogical changes and dolomite accumulation in coralline algae on tropical reefs. Nature Communications, 5: 3310, doi: 10.1038/ncomms4310.

Domenici, P., B.J.M. Allan, S.-A. Watson, M.I. McCormick and P.L. Munday, 2014. Shifting from right to left: the combined effect of elevated CO2 and temperature on behavioural lateralization in a coral reef fish. PLoS ONE 9(1): e87969. doi:10.1371/journal.pone.0087969.

Dougherty, L., 2014. Mechanisms, ultrastructure and behavioral flashing in Ctenoides ales: ‘disco clams’.
Malacological Society of Australasia Newsletter, 152: 1-4.

Dougherty, L. F., S. Johnsen, R.L. Caldwell and N.J. Marshall, 2014. A dynamic broadband reflector built from microscopic silica spheres in the 'disco' clam Ctenoides ales. Journal of the Royal Society Interface, 11: 20140407.

Feller, K.D. and T.W. Cronin, 2014. Hiding opaque eyes in transparent organisms: a potential role for larval eyeshine in stomatopod crustaceans. Journal of Experimental Biology, 217: 3263-3273.

Ferrari, M.C.O., M.I. McCormick, M.G. Meekan and D.P. Chivers, 2014. Background level of risk and the survival of predator-naive prey: can neophobia compensate for predator naivety in juvenile coral reef fishes? Proceedings of the Royal Society B, 282: 20142197.

Fox, R.J. and J.M. Donelson, 2014. Rabbitfish sentinels: first report of coordinated vigilance in conspecific marine fishes. Coral Reefs, 33: 253.

Grand, A., M. Pratchett and J. Rivera-Posada, 2014. The immune response of Acanthaster planci to oxbile injections and antibiotic treatment. Journal of Marine Biology, doi: 10.1155/2014/769356.

Hamylton, S. M., J.X. Leon, M.I. Saunders and C.D. Woodroffe, 2014. Simulating reef response to sea-level rise at Lizard Island: a geospatial approach. Geomorphology, 222: 151-161.

Heiniger, H. and R.D. Adlard, 2014. Relatedness of novel species of Myxidium Buetschli, 1882, Zschokkella Auerbach, 1910 and Ellipsomyxa Køie, 2003 (Myxosporea: Bivalvulida) from the gall bladders of marine fishes (Teleostei) from Australian waters. Systematic Parasitology, 87: 47-72.

Hibino, Y., P.A. Todd, S. Yang, Y. Benayahu and J.D. Reimer, 2014. Molecular and morphological evidence for conspecificity of two common Indo-Pacific species of Palythoa (Cnidaria: Anthozoa). Hydrobiologia, DOI: 10.1007/s10750-013-1587-5

Ho, H.W., R.A. Bray, S.C. Cutmore, S. Ward and T.H. Cribb, 2014. Two new species of Phyllodistomum Braun, 1899 (Trematoda: Gorgoderidae Looss, 1899) from Great Barrier Reef fishes. Zootaxa, 3779: 551-562.

How, M.J., M.L. Porter, A.N. Radford, K.D. Feller, S.E. Temple, R.L. Caldwell, N.J. Marshall, T.W. Cronin and N.W. Roberts, 2014. Out of the blue: the evolution of horizontally polarized signals in Haptosquilla (Crustacea, Stomatopoda, Protosquillidae). Journal of Experimental Biology, 217: 3425-3431.

Johansen, J.L., 2014. Quantifying water flow within aquatic ecosystems using load cell sensors: a profile of currents experienced by coral reef organisms around Lizard Island, Great Barrier Reef, Australia. PLOS One, 9(1): e83240. doi:10.1371/journal.pone.0083240.

Katz, S.M., F.J. Pollock, D.G. Bourne and B.L. Willis, 2014. Crown-of-thorns starfish predation and physical injuries promote brown band disease on corals. Coral Reefs, 33: 705-716.

Kerry, J.T. and D.R. Bellwood, 2014. Do tabular corals constitute keystone structures for fishes on coral reefs? Coral Reefs, doi 10.1007/s00338-014-1232-4.

Killen, S.S., M.D. Mitchell, J.L. Rummer, D.P. Chivers, M.C.O. Ferrari, M.G. Meekan, M.I. McCormick and J. Grindstaff, 2014. Aerobic scope predicts dominance during early life in a tropical damselfish. Functional Ecology, 28: 1367-1376.

Kramer, M.J., D.R. Bellwood and O. Bellwood, 2014. Large-scale spatial variation in epilithic algal matrix cryptofaunal assemblages on the Great Barrier Reef. Marine Biology, 161: 2183-2190.

Kramer, M.J., D.R. Bellwood and O. Bellwood, 2014. Benthic crustacea on coral reefs: a quantitative survey. Marine Ecology Progress Series, 511: 105-116.

Lange, R., J. Werminghausen and N. Anthes, 2014. Cephalo-traumatic secretion transfer in a hermaphrodite sea slug. Proceedings of the Royal Society B, 281: 20132424. http://dx.doi.org/10.1098/rspb.2013.2424

Law, C.J., K.M. Dorgon and G.W. Rouse, 2014. Relating divergence in polychaete musculature to different burrowing behaviors: a study using Opheliidae (Annelida). Journal of Morphology, 275: 548-571.

Layton, C. and C.J. Fulton, 2014. Status-dependent foraging behaviour in coral reef wrasses. Coral Reefs, 33: 345-349.

Leis, J.M, C.B. Paris, J.-O. Irisson, M.N. Yerman and U.E. Siebeck, 2014. Orientation of fish larvae in situ is consistent among locations, years and methods, but varies with time of day. Marine Ecology Progress Series, 505: 193-208.

Lienart, G.D.H., M.D. Mitchell, M.C.O. Ferrari and Mark I. McCormick, 2014. Temperature and food availability affect risk assessment in an ectotherm. Animal Behaviour, 89: 199-204.

Lloyd, A.J., 2014. Assessing the risk of ocean acidification for scleractinian corals on the Great Barrier Reef. PhD thesis, University of Technology Sydney.

Lonnstedt, O.M. 2014. Predator-prey interactions and the importance of sensory cues in a changing world. PhD thesis, James Cook University.

Lonnstedt, O.M., M.C.O. Ferrari and D.P. Chivers, 2014. Lionfish predators use flared fin displays to initiate cooperative hunting. Biology Letters, 10(6): 20140281

Lonnstedt, O.M., M.I. McCormick, D.P. Chivers and M.C.O. Ferrari, 2014. Habitat degradation is threatening reef replenishment by making fish fearless. Journal of Animal Ecology, 83: 1178-1185.

Lovelock, C.E., R. Reef and J.M. Pandolfi, 2014. Variation in elemental stoichiometry and RNA:DNA in four phyla of benthic organisms from coral reefs. Functional Ecology, doi: 10.1111/1365-2435.12256

Lowry, J. K. and N.M. Kilgallen, 2014. A revision of the lysianassid genus Waldeckia with the description of four new species (Crustacea, Amphipoda, Lysianassidae, Waldeckiinae subfam. nov.). Zootaxa, 3784(4): 301-345.

Madin, J. S., A.H. Baird, M. Dornelas and S.R. Connolly, 2014. Mechanical vulnerability explains size-dependent mortality of reef corals. Ecology Letters, 17: 1008-1015.

Manassa, R. P., M.I. McCormick, D.L. Dixson, M.C.O. Ferrari and D.P. Chivers, 2014. Social learning of predators by coral reef fish: does observer number influence acquisition of information? Behavioral Ecology and Sociobiology, 68: 1237-1244.

McGee, G.E. and T.D. Clark, 2014. All puffed out: do pufferfish hold their breath while inflated? Biology Letters, 10: 20140823.

Messmer, V., S.A. Blowes, G.P. Jones and P.L. Munday, 2014. Experimental evaluation of diversity-productivity relationships in a coral reef fish assemblage. Oecologia, 176: 237-249.

Momigliano, P., W.D. Robbins, M. Gardner and A. Stow, 2014. Characterisation of 15 novel microsatellite loci for the grey reef shark (Carcharhinus amblyrhynchos). Conservation Genetics Resources, 6: 661-663.

Nash, K.L., 2014. Assessment of scale dependent function in reef fish, and application to the evaluation of coral reef resilience. PhD thesis, James Cook University

Nedosyko, A.M., J.E. Young, J.W. Edwards and K. Burke da Silva, 2014. Searching for a toxic key to unlock the mystery of anemonefish and anemone symbiosis. PLOS One, 9(5): e98449.

Noble, M.M., M.S. Pratchett, D.J. Coker, C. Cvitanovic and C.J. Fulton, 2014. Foraging in corallivorous butterflyfish varies with wave exposure. Coral Reefs, 33: 351-361.

Nolan, M. J., T.L. Miller, S.C. Cutmore, C. Cantacessi and T.H. Cribb, 2014. Cardicola beveridgei n. sp. (Digenea: Aporocotylidae) from the mangrove jack, Lutjanus argentimaculatus (Perciformes: Lutjanidae), and C. bullardi n. sp. from the Australian spotted mackerel, Scomberomorus munroi (Perciformes: Scombridae), from the northern Great Barrier Reef. Parasitology International, 63: 735-745.

Paley, A.S., 2014. Colour polymorphism and its role in stress tolerance in the coral Acropora millepora on the Great Barrier Reef. PhD thesis, James Cook University.

Pink, J.R. and C.J. Fulton, 2014. Right tools for the task: intraspecific modality in the swimming behaviour of coral reef fishes. Marine Biology, 161: 1103-1111.

Pisapia, C. and M.S. Pratchett, 2014. Spatial variation in background mortality among dominant coral taxa on Australia’s Great Barrier Reef. PLoS One, 9(6): e100969.

Pisapia, C., K. Anderson and M.S. Pratchett, 2014. Intraspecific variation in physiological condition of reef-building corals associated with differential levels of chronic disturbance. PLoS One, 9(3): e91529.

Pollock, F.J., 2014. Understanding the drivers of white syndrome coral diseases on Indo-Pacific Reefs. PhD thesis, James Cook University.

Pollock, F.J., E.M. Wood-Charlson, M.J.H. van Oppen, D.G. Bourne, B.L. Willis and K.D. Weynberg, 2014.
Abundance and morphology of virus-like particles associated with the coral Acropora hyacinthus differ between healthy and white syndrome-infected states. Marine Ecology Progress Series, 510: 39-43.

Poulos, D.E. and M.I. McCormick, 2014. Who wins in the battle for space? The importance of priority, behavioural history and size. Animal Behaviour, 90: 305-314.

Radford, C. A., J.A. Stanley and A.G. Jeffs, 2014. Adjacent coral reef habitats produce different underwater sound signatures. Marine Ecology Progress Series, 505: 19-28.

Reef, R.,, I.C. Feller and C.E. Lovelock, 2014. Mammalian herbivores in Australia transport nutrients from terrestrial to marine ecosystems via mangroves. Journal of Tropical Ecology, doi:10.1017/S0266467414000054.

Rizzari, J. R., B.J. Bergseth and A.J. Frisch, 2014. Impact of conservation areas on trophic interactions between apex predators and herbivores on coral reefs. Conservation Biology, doi: 10.1111/cobi.12385.

Rizzari, J.R. and O.M. Lonnstedt, 2014. Cooperative hunting and gregarious behaviour in the zebra lionfish, Dendrochirus zebra. Marine Biodiversity, doi:10.1007/s12526-014-0215-6.

Rizzari, J.R., A.J. Frisch and K.A. Magnenat, 2014. Diversity, abundance, and distribution of reef sharks on outer-shelf reefs of the Great Barrier Reef, Australia. Marine Biology, 161: 2847-2855.

Rizzari, J.R., A.J. Frisch, A.S. Hoey and M.I. McCormick, 2014. Not worth the risk: apex predators suppress herbivory on coral reefs. Oikos 000: 001-008, doi: 10.1111/oik.01318.

Roche, D.G., 2014. Effects of biotic and physical stressors on fish swimming performance and behaviour.
PhD thesis, Australian National University.

Saunders, M.I., J.X. Leon, D.P. Callaghan, C.M. Roelfsema, S. Hamylton, C.J. Brown, T. Baldock, A. Golshani, S.R. Phinn, C.E. Lovelock, O. Hoegh-Guldberg, C.D.Woodroffe and P.J. Mumby, 2014. Interdependency of tropical marine ecosystems in response to climate change. Nature Climate Change, doi: 10.1038/NCLIMATE2274.

Schmidt-Roach, K.J. Miller, P. Lundgren and N. Andreakis, 2014. With eyes wide open: a revision of species within and closely related to the Pocillopora damicornis species complex (Scleractinia; Pocilloporidae) using morphology and genetics. Zoological Journal of the Linnean Society, 170: 1-33.

Siebeck, U.E., 2014. Communication in the utraviolet: unravelling the secret language of fish. In: G. Witzany (ed.), Biocommunication of Animals, Springer: Dordecht

Siebeck, U.E., G.M. Wallis, L. Litherland, O. Ganeshina and M. Vorobyev, 2014. Spectral and spatial selectivity of luminance vision in reef fish. Frontiers in Neural Circuits, 8(118): 1-8.

Silverman, J., K. Schneider, D.I. Kline, T. Rivlin, A. Rivlin, S. Hamylton, B. Lazar, J. Erez and K. Caldeira, 2014. Community calcification in Lizard Island, Great Barrier Reef: A 33 year perspective. Geochimica et Cosmochimica Acta, 144: 72-81.

Sims, C.A., C. Riginos, S.P. Blomberg, T. Huelsken, J. Drew and A. S. Grutter, 2014. Cleaning up the biogeography of Labroides dimidiatus using phylogenetics and morphometrics. Coral Reefs, 33: 223-233.

Soares, M. C., S.C. Cardoso, A.S. Grutter, R.F. Oliveira, and R. Bshary, 2014. Cortisol mediates cleaner wrasse switch from cooperation to cheating and tactical deception. Hormones and Behavior, 66: 346-350.

Sørensen, C., P.L. Munday and G.E. Nilsson, 2014. Aerobic vs. anaerobic scope: sibling species of fish indicate that temperature dependence of hypoxia tolerance can predict future survival. Global Change Biology, 20(3): 724-729.

Stella, J.S., P.L. Munday, S.P.W. Walker, M.S. Pratchett and G.P. Jones, 2014. From cooperation to combat: adverse effect of thermal stress in a symbiotic coral-crustacean community. Oecologia, 174(4): 1187-1195.

Stewart, M.J., P. Stewart and J. Rivera-Posada, 2014. De novo assembly of the transcriptome of Acanthaster planci. Molecular Ecology Resources, doi: 10.1111/1755-0998.12360.

Summers, M. M., C.G. Messing and G.W. Rouse, 2014. Phylogeny of Comatulidae (Echinodermata: Crinoidea: Comatulida): A new classification and an assessment of morphological characters for crinoid taxonomy. Molecular Phylogenetics and Evolution, 80: 319-339.

Summers, M.M. and G.W. Rouse, 2014. Phylogeny of Myzostomida (Annelida) and their relationships with echinoderm hosts. BMC Evolutionary Biology, 14: 170 (15 pp).

Summers, M.M., I.I. Al-Hakim and G.L. Rouse, 2014. Turbo-taxonomy: 21 new species of Myzostomida (Annelida). Zootaxa, 3873(4): 301-344.

Sun, D., R.A. Bray, R.Q. Yong, S.C. Cutmore and T.H. Cribb, 2014. Pseudobacciger cheneyae n. sp. (Digenea: Gymnophalloidea) from Weber’s chromis (Chromis weberi Fowler & Bean) (Perciformes: Pomacentridae) at Lizard Island, Great Barrier Reef, Australia. Systematic Parasitology, 88: 141-152.

Taylor, J.D., E.A. Glover and S.T. Williams, 2014. Diversification of chemosymbiotic bivalves: origins and relationships of deeper water Lucinidae. Biological Journal of the Linnean Society, 111: 401-420.

Thoen, H.H., 2014. Colour vision in mantis shrimps: understanding one of the most complex visual systems in the world. PhD thesis, University of Queensland.

Thoen, H.H., M.J. How, T.-H. Chiou and J. Marshall, 2014. A different form of color vision in mantis shrimp. Science, 343:411-413.

Tonk, L., E.M Sampayo, T.C. LaJeunesse, V. Schrameyer and O. Hoegh-Guldberg, 2014. Symbiodinium (Dinophyceae) diversity in reef-invertebrates along an offshore to inshore reef gradient near Lizard Island, Great Barrier Reef. Journal of Phycology, 50: 552-563.

Vail, A.L., A. Manica and R. Bshary, 2014. Fish choose appropriately when and with whom to collaborate.
Current Biology, 24(17):R791-R793.

Weaver, H.J. and L.R. Smales, 2014. Two species of Acanthocephala (Rhadinorhynchidae and Transvenidae) from elasmobranchs from Australia. Comparative Parasitology, 81: 110-113.

Welsh, J.Q., 2014. The spatial ecology of coral reef fishes. PhD thesis, James Cook University.

Wismer, S. A.I. Pinto, A.L. Vail, A.S. Grutter, R. Bshary and J. Schneider, 2014. Variation in cleaner wrasse cooperation and cognition: influence of the developmental environment? Ethology, 120: 519-531.

Ziegler, M., S.K. Fitzpatrick, I. Burghardt, K.L. Liberatore, A.J. Leffler, C. Takacs-Vesbach and U. Shepherd, 2014. Thermal stress response in a dinoflagellate-bearing nudibranch and the octocoral on which it feeds. Coral Reefs, 33: 1085-1099.


LIRS publications in 2013: 98

Allan, B.J.M., P. Domenici, M.I. McCormick, S.-A. Watson and P.L. Munday, 2013. Elevated CO2 affects predator-prey interactions through altered performance. PLOS One, 8(3): e58520. doi:10.1371/journal.pone.058520.

Anthes, N., J. Werminghausen and R. Lange, 2013. Large donors transfer more sperm, but depletion is faster in a promiscuous hermaphrodite. Behavioural Ecology and Sociobiology, doi: 10.1007/s00265-013-1662-y.

Beckmann, C. and P.A. Biro, 2013. On the validity of a single (boldness) assay in personality research. Ethology,119: 937-947.

Blowes, S.A., M.S. Pratchett and S.R. Connolly, 2013. Heterospecific aggression and dominance in a guild of coral-feeding fishes: the roles of dietary ecology and phylogeny. The American Naturalist, 182: 157-168.

Borsa, P., I.S. Arlyza, W.-J. Chen, J.-D. Durand, M.G. Meekan and K.N. Shen, 2013. Resurrection of New Caledonian maskray Neotrygon trigonoides (Myliobatoidei: Dasyatidae) from synonymy with N. kuhlii, based on cytochrome-oxidase I gene sequences and spotting patterns. Comptes Rendus Biologies, 336: 221-232.

Bott, N.J., T.L. Miller and T.H. Cribb, 2013. Bucephalidae (Platyhelminthes: Digenea) of Plectropomus (Serranidae: Epinephelinae) in the tropical Pacific. Parasitology Research, 112: 2561-2584.

Bradbury, D., 2013. Inter- and intra-specific variation in bleaching susceptibility among scleractinian corals. PhD thesis, James Cook University.

Brandl, S.J. and D.R. Bellwood, 2013. Morphology, sociality, and ecology: can morphology predict pairing behavior in coral reef fishes? Coral Reefs, 32: 835-846.

Brooker, R.M., 2013. Habitat preferences of a corallivorous reef fish: predation risk versus food quality. Coral Reefs, 32: 613-622.

Brooker, R.M., G.P. Jones and P.L. Munday, 2013. Within-colony feeding selectivity by a corallivorous reef fish: foraging to maximize reward? Ecology and Evolution, 3(12): 4109-4118.

Bryant, L.M., 2013. Cryptic diversity and evolutionary relationships among Australian closed-forest Melomys (Rodentia: Muridae) and related Australo-Papuan mosaic-tailed rats. PhD thesis, Queensland University of Technology.

Camacho-García, Y.E., E. Ornelas-Gatdula, T.M. Gosliner and Á. Valdés, 2013. Phylogeny of the family Aglajidae (Pilsbry, 1895) (Heterobranchia: Cephalaspidea) inferred from mtDNA and nDNA. Molecular Phylogenetics and Evolution, dx.doi.org/10.1016/j.ympev.2013.11.010.

Ceccarelli, D.M., M.J. Emslie and A.R. Lewis, 2013. Farming versatility by Pomacentrus wardi. Marine and Freshwater Research, 64: 558-561.

Cheney, K.L., C. Newport, E.C. McClure and N..J. Marshall, 2013. Colour vision and response bias in a coral reef fish. Journal of Experimental Biology, 216: 2967-2973.

Chivers, D.P., D.L. Dixson, J.R. White, M.I. McCormick and M.C.O. Ferrari, 2013. Degradation of chemical alarm cues and assessment of risk throughout the day. Ecology and Evolution, 3(11): 3925-3934.

Cisternas, P., T.D. O'Hara and M. Byrne, 2013. An ornate fertilisation envelope is characteristic of some Ophiocoma species. Echinoderms in a Changing World, Johnson (ed.), Taylor & Francis Group, London, pp. 229-231.

Coker, D.J., 2013. Documentation of the mimic octopus Thaumoctopus mimicus in the Great Barrier Reef, Australia. Marine Biodiversity Records, 6; e14. doi:10.1017/S175526721200125X

Couturier, C.S., J.A.W. Stecyk, J.L. Rummer, P.L. Munday and G.E. Nilsson, 2013. Species-specific effects of near-future CO2 on the respiratory performance of two tropical prey fish and their predator. Comparative Biochemistry and Physiology, Part A, 166: 482-489.

Crawley, N.E., 2013. The global impacts of climate change on fish. PhD thesis, Brunel University.

Curtis, L.M., A.S. Grutter, N.J. Smit and A.J. Davies, 2013. Gnathia aureamaculosa, a likely definitive host of Hemogregarina balistapi and potential vector for Hemogregarina bigemina between fishes of the Great Barrier Reef, Australia. International Journal for Parasitology, http://dx.doi.org/10.1016/j.ijpara.2012.11.012.

Cutmore, S.C., T.L. Miller, S.S. Curran, M.B. Bennett and T.H. Cribb, 2013. Phylogenetic relationships of the Gorgoderidae (Platyhelminthes: Trematoda), including the proposal of a new subfamily (Degeneriinae n. subfam.). Parasitology Research, 112:3063–3074.

Diaz, P.E., R.A. Bray and T.H. Cribb, 2013. Paradiscogaster flindersi and P. oxleyi n. sp. (Digenea: Faustulidae): overlapping host and geographical distributions in corallivore chaetodontid fishes in the tropical Indo-west Pacific. Systematic Parasitology, 86: 87-99.

Duchene D., S.O. Klanten, P.L. Munday, J. Herler and L. van Herwerden, 2013. Phylogenetic evidence for recent diversification of obligate coral-dwelling gobies compared with their host corals. Molecular Phylogenetics and Evolution, 69: 123-132.

Feller, K.D., T.W. Cronin, S.T. Ahyong and M.L. Porter, 2013. Morphological and molecular description of the late-stage larvae of Alima Leach, 1817 (Crustacea: Stomatopoda) from Lizard Island, Australia. Zootaxa, 3722 (1): 22-32.

Fulton, C.J., J.L. Johansen and J.F. Steffensen, 2013. Energetic extremes in aquatic locomotion by coral reef fishes. PLoS ONE 8(1): e54033. doi:10.1371/journal.pone.0054033.

Fulton, C.J., S.A. Binning, P.C. Wainwright and D.R. Bellwood, 2013. Wave-induced abiotic stress shapes phenotypic diversity in a coral reef fish across a geographical cline. Coral Reefs 32: 685-689.

Gagliano, M. and M. Depczynski, 2013. Spot the difference: mimicry in a coral reef fish. PLoS ONE 8(2): e55938. doi:10.1371/journal.pone.0055938.

Gingins, S., J. Werminghausen, R.A. Johnstone, A.S. Grutter and R. Bshary, 2013. Power and temptation cause shifts between exploitation and cooperation in a cleaner wrasse mutualism. Proceedings of the Royal Society B, 280: 20130553.

Goatley, C.H.R., 2013. The ecological role of sediments on coral reefs. PhD thesis, James Cook University.

Goatley, C.H.R. and D.R. Bellwood, 2013. Ecological consequences of sediment on high-energy coral reefs. PLoS ONE 8(10): e77737. doi:10.1371/journal.pone.0077737.

Hamylton, S.M., A. Pescud, J.X. Leon and D.P. Callaghan, 2013. A geospatial assessment of the relationship between reef flat community calcium carbonate production and wave energy. Coral Reefs, 32: 1025-1039.

Heiniger, H. and R.D. Adlard, 2013. Molecular identification of cryptic species of Ceratomyxa Thélohan, 1892 (Myxosporea: Bivalvulida) including the description of eight novel species from apogonid fishes (Perciformes: Apogonidae) from Australian waters. Acta Parasitologica, 58(3): 342-360.

Hodge, J.R., C.I. Read, D.R. Bellwood and L. van Herwrden, 2013. Evolution of sympatric species: a case study of the coral reef fish genus Pomacanthus (Pomacanthidae). Journal of Biogeography, 40: 1676-1687.

Hoey, A.S., S.J. Brandl and D.R. Bellwood, 2013. Diet and cross-shelf distribution of rabbitfishes (f. Siganidae) on the northern Great Barrier Reef: implications for ecosystem function. Coral Reefs, doi: 10.1007/s00338-013-1043-z.

Holcomb, M., A.L. Cohen and D.C. McCorkle, 2013. An evaluation of staining techniques for marking daily growth in scleractinian corals. Journal of Experimental Marine Biology and Ecology, 440: 126-131.

Horne, J.B. and L. van Herwerden, 2013. Long-term panmixia in a cosmopolitan Indo-Pacific coral reef fish and a nebulous genetic boundary with its broadly sympatric sister species. Journal of Evolutionary Biology, doi: 10.1111/jeb.12092.

Huelsken, T., J. Keyse, L. S. Penny, E.A. Treml and C. Rignios, 2013. A novel widespread cryptic species and phylogeographic patterns within several giant clam species (Cardiidae: Tridacna) from the Indo-Pacific Ocean. PLoS ONE, 8(11): e80858, doi:10.1371/journal.pone.0080858.

Jeans, J., D.A. Campbell, M.O. Hoogenboom, 2013. Increased reliance upon photosystem II repair following acclimation to high-light by coral-dinoflagellate symbioses. Photosynthesis Research, 118: 219-229.

Johansen, J.L. and G.P. Jones, 2013. Sediment-induced turbidity impairs foraging performance and prey choice of planktivorous coral reef fishes. Ecological Applications, 23(6): 1504-1517.

Karlinska-Batres, K. and G. Woerheide, 2013. Phylogenetic diversity and community structure of the symbionts associated with the coralline sponge Astrosclera willeyana of the Great Barrier Reef. Microbial Ecology, 65: 740-752.

Keshavmurthy, S., S.-Y. Yang, A. Alamaru, Y.-Y. Chuang, M. Pichon, D. Obura, S. Fontana, S. De Palmas, F. Stefani, F. Benzon and many others, 2013. DNA barcoding reveals the coral ‘‘laboratory-rat’’, Stylophora pistillata encompasses multiple identities. Nature Scientific Reports, 3: 1520; doi:10.1038/srep01520.

Kim, S.W., A.M. Kerr and G. Paulay, 2013. Colour, confusion, and crossing: resolution of species problems in Bohadschia (Echinodermata: Holothuroidea). Zoological Journal of the Linnean Society, 168: 81-97.

Komyakova, V., P.L. Munday and G.P. Jones, 2013. Relative importance of coral cover, habitat complexity and diversity in determining the structure of reef fish communities. PLoS ONE 8(12): e83178. doi:10.1371/journal.pone.0083178.

Lange, R., J. Werminghausen and N. Anthes, 2013. Does traumatic secretion transfer manipulate mating roles or reproductive output in a hermaphroditic sea slug? Behavioural Ecology and Sociobiology, 67: 1239-1247.

Lentfer, C.J., M.W. Felgate, R.A. Mills and J. Specht, 2013. Human history and palaeoenvironmental change at Site 17, Freshwater Beach, Lizard Island, Northeast Queensland, Australia. Queensland Archaeological Research, 16: 141-164.

Leon, J.-X., S.R. Phinn, S. Hamylton and M.I. Saunders, 2013. Filling the 'white ribbon' - a multisource seamless digital elevation model for Lizard Island, northern Great Barrier Reef. International Journal of Remote Sensing, doi: 10.1080/01431161.2013.800659.

Llewelyn, J., L. Schwarzkopf, B.L. Phillips and R. Shine, 2013. After the crash: How do predators adjust following the invasion of a novel toxic prey type? Austral Ecology, doi:10.1111/aec.12058.

Lonnstedt, O.M. and M.I. McCormick, 2013. Ultimate predators: lionfish have evolved to circumvent prey risk assessment abilities. PLoS ONE 8(10): e75781, doi: 10.1371/journal.pone.0075781.

Lonnstedt, O.M., M.I. McCormick and D.P. Chivers, 2013. Predator-induced changes in the growth of eyes and false eyespots. Nature Scientific Reports, 3: 2259, doi: 10.1038/srep02259.

Lonnstedt, O.M., P.L. Munday, M.I. McCormick, M.C.O. Ferrari and D.P. Chivers, 2013. Ocean acidification and responses to predators: can sensory redundancy reduce the apparent impacts of elevated CO2 on fish? Ecology and Evolution, 3(10): 3565-3575.

Manassa, R.P., 2013. Social learning and its role in anti-predator behaviour by coral reef fishes. PhD thesis, James Cook University.

Manassa, R.P., M.I. McCormick and D.P. Chivers, 2013. Socially acquired predator recognition in complex ecosystems. Behavioural Ecology and Sociobiology, 67: 1033-1040.

McCormick, M.I. and O.M. Lonnstedt, 2013. Degrading habitats and the effect of topographic complexity on risk assessment. Ecology and Evolution, 3(12): 4221-4229.

McCormick, M.I., S.-A. Watson and P.L. Munday, 2013. Ocean acidification reverses competition for space as habitats degrade. Nature Scientific Reports, 3: 3280 (1-6).

Mendenhall, K. and B. Jensen, 2013. Coral competition in the Great Barrier Reef: the competitive nature of coral families, morphologies and sizes in reef flat areas around Lizard Island, Australia. University of Texas at Austin Undergraduate Research Journal, 12: 55-69.

Messmer, V., M.S. Pratchett and T.D. Clark, 2013. Capacity for regeneration in Crown of Thorns Starfish, Acanthaster planci. Coral Reefs, doi: 10.1007/s00338-013-1017-1.

Miller, T.L. and R.D. Adlard, 2013. Unicapsula species (Myxosporea: Trilosporidae) of Australian marine fishes, including the description of Unicapsula andersenae n. sp. in five teleost families off Queensland, Australia. Parasitology Research, 112: 2945-2957.

Miller, T.L. and T.H. Cribb, 2013. Dramatic phenotypic plasticity within species of Siphomutabilus n. g. (Digenea: Cryptogonimidae) from Indo-Pacific caesionines (Perciformes: Lutjanidae). Systematic Parasitology, 86: 101-112.

Miquel, J. and Z. Swiderski, 2013. Spermatological characteristics of the Trypanorhyncha inferred from new ultrastructural data on species of Tentaculariidae, Eutetrarhynchidae, and Progrillotiidae. Comptes Rendues Biologies, 336: 65-72.

Mitchell, M.D., M.I. McCormick, D.P. Chivers and M.C.O. Ferrari, 2013. Generalization of learned predator recognition in coral reef ecosystems: how cautious are damselfish? Functional Ecology, doi: 10.1111/1365-2435.12043.

Momigliano, P. and S. Uthicke, 2013. Symbiosis in a giant protist (Marginopora vertebralis, Soritinae): flexibility in symbiotic partner ships along a natural temperature gradient. Marine Ecology Progress Series, 491: 33-46.

Nash, K.L., N.A.J. Graham and D.R. Bellwood, 2013. Fish foraging patterns, vulnerability to fishing, and implications for the management of ecosystem function across scales. Ecological Applications, 23(7): 1632-1644.

Paley, A.S., D. Abrego, J. Haapkyla and B.L. Willis, 2013. Coral disease outbreak monitoring program: implications for management. Great Barrier Reef Marine Park Authority, Townsville.

Pinzon, J.H., E. Sampayo, E. Cox, L.J. Chauka, C.A. Chen, C.R. Voolstra and T.C. LaJeunesse, 2013. Blind to morphology: genetics identifies several widespread ecologically common species and few endemics among Indo-Pacific cauliflower corals (Pocillopora, Scleractinia). Journal of Biogeography, 40: 1595-1608.

Raby, G.D., J.R. Packer, A.J. Danylchuk and S.J. Cooke, 2013. The understudied and underappreciated role of predation in the mortality of fish released from fishing gears. Fish and Fisheries, doi: 10.1111/faf.12033.

Richards, Z.T., 2013. A comparison of proxy performance in coral biodiversity monitoring. Coral Reefs, 32(1): 287–292.

Roche, D.G., L.E. Strong and S. Binning, 2013. Prevalence of the parasitic cymothoid isopod Anilocra nemipteri on its fish host at Lizard Island, Great Barrier Reef. Australian Journal of Zoology, http://dx.doi.org/10.1071/ZO12130.

Roche, D.G., S.A. Binning, L.E. Strong, J.N. Davies and M.D. Jennions, 2013. Increased behavioural lateralization in parasitized coral reef fish. Behavioural Ecology and Sociobiology, 67: 1339-1344.

Roche, D.G., S.A. Binning, Y. Bosiger, J.L. Johansen and J.L. Rummer, 2013. Finding the best estimates of metabolic rates in a coral reef fish. Journal of Experimental Biology, 216: 2103-2110.

Rohner, C.A. and T.H. Cribb, 2013. Opecoelidae (Digenea) in northern Great Barrier Reef goatfishes (Perciformes: Mullidae). Systematic Parasitology, 84: 237-253.

Rouse, G.W., L.S. Jermiin, N.G Wilson, I. Eeckhaut, D. Lanterbecq, T. Oji, C.M. Young, T. Browning, P. Cisternas, L.E. Helgen, M. Stuckey and C.G. Messing, 2013. Fixed, free, and fixed: The fickle phylogeny of extant Crinoidea (Echinodermata) and their Permian - Triassic origin. Molecular Phylogenetics and Evolution, 66: 161 - 181.

Ruder, T., K. Sunagar, E.A.B. Undheim, S.A. Ali, T.-C. Wai, D.H.W. Low, T.N.W. Jackson, G.F. King, A. Antunes and B.G. Fry, 2013. Molecular phylogeny and evolution of the proteins encoded by coleoid (cuttlefish, octopus, and squid) posterior venom glands. Journal of Molecular Evolution, doi: 10.1007/s00239-013-9552-5.

Rummer, J.L., C.S. Couturer, J.A.W. Stecyk, N.M. Gardiner, J.P. Kinch, G.E. Nilsson and P.L. Munday, 2013. Life on the edge: thermal optima for aerobic scope of equatorial reef fishes are close to current day temperatures. Global Change Biology, doi: 10.1111/gcb.12455.

Rummer, J.L., J.A.W. Stecyk, C.S. Couturier, S.-A..Watson, G.E. Nilsson and P.L. Munday, 2013. Elevated CO2 enhances aerobic scope of a coral reef fish. Conservation Physiology, 1: 10.1093/conphys/cot023.

Sauvage, T., C. Payri, S.G.A. Draisma, W.F. Prud'homme van Reine, H. Verbruggen, G.S. Belton, F.D. Gurgel, D. Gabriel, A.R. Sherwood and S. Fredericq, 2013. Molecular diversity of the Caulerpa racemosa - Caulerpa peltata complex (Caulerpaceae, Bryopsidales) in New Caledonia, with new Australasian records for C. racemosa var. cylindracea. Phycologia, 52 (1): 6-13.

Schmidt-Roach, S., 2013. The ecological and evolutionary significance of reproductive traits in corals. PhD thesis, University of Tasmania.

Schweinsberg, M. R.A.G. Pech, R. Tollrian and K.P. Lampert, 2013. Transfer of intracolonial genetic variability through gametes in Acropora hyacinthus corals. Coral Reefs, doi: 10.1007/s00338-013-1102-5.

Skinner M.P., R.J. Lewis and S. Morton, 2013. Ecology of the ciguatera causing dinoflagellates from the Northern Great Barrier Reef: Changes in community distribution and coastal eutrophication. Marine Pollution Bulletin, 77: 210-219.

Tonk, L., E.M. Sampayo, S. Weeks, M. Magno-Canto and O. Hoegh-Guldberg, 2013. Host-specific interactions with environmental factors shape the distribution of Symbiodinium across the Great Barrier Reef. PLoS ONE 8(7): e68533. doi:10.1371/journal.pone.0068533.

Torda, G, P. Lundgren, B.L. Willis and M.J.H. van Oppen, 2013. Genetic assignment of recruits reveals short- and longdistance larval dispersal in Pocillopora damicornis on the Great Barrier Reef. Molecular Ecology, 22: 5821-5834.

Torda, G, P. Lundgren, B.L. Willis and M.J.H. van Oppen, 2013. Revisiting the connectivity puzzle of the common coral Pocillopora damicornis. Molecular Ecology, 22: 5805-5820.

Torda, G., S. Schmidt-Roach, L.M. Peplow, P. Lundgren and M.J.H. van Oppen, 2013. A rapid genetic assay for the identification of the most common Pocillopora damicornis genetic lineages on the Great Barrier Reef. PLoS ONE 8(3): e58447. doi:10.1371/journal.pone.0058447.

Trapon, M.L., 2013. Variation in early post-settlement growth and mortality of scleractinian corals. PhD thesis, James Cook University.

Trapon, M.L., M.S. Pratchett and A.S. Hoey, 2013. Spatial variation in abundance, size and orientation of juvenile corals related to the biomass of parrotfishes on the Great Barrier Reef, Australia. PLOS One, 8(2): e57788.

Trapon, M.L., M.S. Pratchett, A.S. Hoey and A.H. Baird, 2013. Influence of fish grazing and sedimentation on the early post-settlement survival of the tabular coral Acropora cytherea. Coral Reefs, 32: 1051-1059.

Vail, A.L., A. Manica and R. Bshary, 2013. Referential gestures in fish collaborative hunting. Nature Communications, 4: 1765, doi: 10.1038/ncomms2781.

Vullioud, P., R. Bshary and A.F.H. Ros, 2013. Intra- and interspecific aggression do not modulate androgen levels in dusky gregories, yet male aggression is reduced by an androgen blocker. Hormones and Behavior, 64: 430-438.

Walker, J.A., M.E. Alfaro, M.M. Noble and C.J. Fulton, 2013. Body fineness ratio as a predictor of maximum prolonged-swimming speed in coral reef fishes. PLOS One, 8(10): e75422 (pp 1-13).

Watson, S.-A., S. Lefevre, M.I. McCormick, P. Domenici, G.E. Nilsson and P.L. Munday, 2013. Marine mollusc predator-escape behaviour altered by near-future carbon dioxide levels. Proceedings of the Royal Society B, 281: 20132377.

Wei, N.-W.V, C. Watson and K.S. Gibb, 2013. Phylogenetic and geographic variation of northern Australian sympatric lineages of Treptopale homalos and T. paromolos (Annelida: Phyllodocida: Chrysopetalidae) using mitochondrial and nuclear sequences. Marine Biology Research, 9(7): 692-702.

Welsh, J.Q., C.H.R. Goatley and D. R. Bellwood, 2013. The ontogeny of home ranges: evidence from coral reef fishes. Proceedings of the Royal Society B, 280: 20132066.

Wenger, A.S., 2013. Suspended sediment and its effects on the behavior and physiology of coral reef fishes. PhD thesis, James Cook University.

Wenger, A.S. and M.I. McCormick, 2013. Determining trigger values of suspended sediment for behavioral changes in a coral reef fish. Marine Pollution Bulletin, ttp://dx.doi.org/10.1016/j.marpolbul.2013.02.014.

Werminghausen, J., R. Lange and N. Anthes, 2013. Seeking a sex-specific Coolidge effect in a simultaneous hermaphrodite. Ethology, 119: 541-551.

White, J.R., M.I. McCormick and M.G. Meekan, 2013. Syndromes or flexibility: behavior during a life history transition of a coral reef fish. PLoS ONE 8(12): e84262. doi:10.1371/journal.pone.0084262.

White, J.R., M.G. Meekan, M.I. McCormick and M.C.O. Ferrari, 2013. A comparison of measures of boldness and their relationships to survival in young fish. PLoS ONE 8(7): e68900. doi:10.1371/journal.pone.0068900

Wilson, S.K., R. Fisher and M.S. Pratchett, 2013. Differential use of shelter holes by sympatric species of blennies (Blennidae). Marine Biology, 160: 2405-2411.

Zamzow J.P., U.E. Siebeck, M.J. Eckes and A.S. Grutter, 2013. Ultraviolet-B wavelengths regulate changes in UV absorption of cleaner fish Labroides dimidiatus mucus. PLoS ONE 8(10): e78527. doi:10.1371/journal.pone.0078527.


LIRS publications in 2012: 89

Bellwood, D.R., A.S. Hoey and T.P Hughes, 2012. Human activity selectively impacts the ecosystem role of parrotfishes. Proceedings of the Royal Society B, 279: 1621-1629.

Binning, S.A., D.G. Roche and C. Layton, 2012. Ectoparasites increase swimming costs in a coral reef fish. Biology Letters, 9: 20120927.

Bosiger, Y.J., O.M. Lonnstedt, M.I. McCormick and M.C.O. Ferrari, 2012. Learning temporal patterns of risk in a predator-diverse environment. PLoS One, 7(4): e34535.

Brooker, R,M., G.P. Jones and P.L. Munday, 2012. Prey selectivity affects reproductive success of a corallivorous reef fish. Oecologia, doi: 10.1007/s00442-012-2521-7.

Bryan, S.E., A.G. Cook, J.P. Evans, K. Hebden, L. Hurrey, P. Colls, J.S. Jell, D. Weatherley and J.Firn, 2012. Rapid, long-distance dispersal by pumice rafting. PLoS One, 7(7): e40583.

Bshary, A. and R. Bshary, 2012. Individual differences in foraging strategies of parasitic Sabre-Tooth Blennies. PLoS One 7(9): e45998.

Burger, T.D., R. Shao, L. Beati, H. Miller and S.C. Barker, 2012. Phylogenetic analysis of ticks (Acari: Ixodida) using mitochondrial genomes and nuclear rRNA genes indicates that the genus Amblyomma is polyphyletic. Molecular Phylogenetics and Evolution, 64: 45-55.

Carter, A.J. and W.E. Feeney, 2012. Taking a comparative approach: analysing personality as a multivariate behavioural response across species. PLoS One, 7(7): e42440.

Choat, J.H., O.S. Klanten, L. Van Herwerden, D.R. Robertson and K.D. Clements, 2012. Patterns and processes in the evolutionary history of parrotfishes (Family Labridae). Biological Journal of the Linnean Society, 107: 529-557.

Christa, G., L. Wescott, T.F. Schaeberle, G.M. Koenig and H. Waegele, 2012. What remains after 2 months of starvation? Analysis of sequestered algae in a photosynthetic slug, Plakobranchus ocellatus (Sacoglossa, Opisthobranchia), by barcoding. Planta, doi: 10.1007/s00425-012-1788-6.

Coker, D.J., 2012. The importance of live coral habitat for reef fishes and its role in key ecological processes. PhD thesis, James Cook University.

Coker, D.J., N.A.J. Graham and M.S. Pratchett, 2012. Interactive effects of live coral and structural complexity on the recruitment of reef fishes. Coral Reefs, 31: 919-927.

Coker, D.J., M.S. Pratchett and P.L. Munday, 2012. Influence of coral bleaching, coral mortality and conspecific aggression on movement and distribution of coral-dwelling fish. Journal of Experimental Marine Biology and Ecology, 414-415: 62-68.

Cumbo, V.R, A.H. Baird and M.J.H. van Oppen, 2012. The promiscuous larvae: flexibility in the establishment of symbiosis in corals. Coral Reefs, doi: 10.1007/s00338-012-0951-7.

Daneliya, M.E., 2012. Description of Heteromysis (Olivemysis) ningaloo new species and interesting records of H. (Gnathomysis) harpaxoides Bacescu and Bruce (Crustacea: Mysida: Mysidae) from Australian coral reefs. Records of the Western Australian Museum, 27: 135-147.

Devine, B.M. and P.L. Munday, 2012. Habitat preferences of coral-associated fishes are altered by short-term exposure to elevated CO2. Marine Biology, doi: 10.1007/s00227-012-2051-1.

Farquharson, C., N.J. Smit, A.S. Grutter and A.J. Davies, 2012. Gnathia masca sp. nov. (Crustacea, Isopoda, Gnathiidae) from Lizard Island, Great Barrier Reef, Australia. Zootaxa, 3233: 22-36.

Feeney, W.E., O.M. Lonnstedt, Y. Bosiger, J. Martin, G.P. Jones, R.J. Rowe and M.I. McCormick, 2012. High rate of prey consumption in a small predatory fish on coral reefs. Coral Reefs, 31: 909-918.

Ferrari, M.C.O., R.P. Manassa, D.L. Dixson, P.L. Munday, M.I. McCormick, M.G. Meekan, A. Sih and D.P. Chivers, 2012. Effects of ocean acidification on learning in coral reef fishes. PLoS One, 7(2): e31478.

Ferrari, M.C.O., M.I. McCormick, P.L. Munday, M.G. Meekan, D.L. Dixson, O. Lonnstedt and D.P. Chivers, 2012. Effects of ocean acidification on visual risk assessment in coral reef fishes. Functional Ecology, 26: 553–558.

FitzPatrick, S.K., K. L. Liberatore, J.R. Garcia, I. Burghardt, D.R. Colman, S.A. Moquin, C.D. Takacs-Vesbach and U.L. Shepherd, 2012. Symbiodinium diversity in the soft coral Heteroxenia sp. and its nudibranch predator Phyllodesmium lizardensis. Coral Reefs, 31: 895–905.

Fox, R.J., 2012. The trophic and spatial ecology of rabbitfishes (Perciformes, Siganidae) on coral reefs. PhD thesis, James Cook University.

Fox, R.J. and D.R. Bellwood, 2012. Niche partitioning of feeding microhabitats produces a unique function for herbivorous rabbitfishes (Perciformes, Siganidae) on coral reefs. Coral Reefs, doi: 10.1007/s00338-012-0945-5.

Gleeson, R.J and R.D. Adlard, 2012. Phylogenetic relationships amongst Chloromyxum Mingazzini, 1890 (Myxozoa: Myxosporea), and the description of six novel species from Australian elasmobranchs. Parasitology International, 61: 267-274.

Goatley, C.H.R. and D.R. Bellwood, 2012. Sediment suppresses herbivory across a coral reef depth gradient. Biology Letters, doi: 10.1098/rsbl.2012.0770.

Goatley, C.H.R., A.S. Hoey and D.R. Bellwood, 2012. The role of turtles as coral reef macroherbivores. PLoS One, 7(6): e39979.

Golshani, A., T.E. Baldock, P.J. Mumby, D. Callaghan, P. Nielsen and S. Phinn, 2012. Climate impacts on hydrodynamics and sediment dynamics at reef islands. Proceedings of the 12th International Coral Reef Symposium, Cairns, Australia, 9-13 July 2012.

Grim, J.N. and K.D. Clements, 2012. New observations on the ciliate genus Vestibulongum (Pycnotrichidae): vestibular ultrastructure, macronuclear endosymbiotic bacteria, biogeography, and evidence for host specificity. Journal of Eukaryotic Microbiology, doi: 10.1111/jeu.12004.

Grutter, A.S., 2012. Enhanced colonization success and competition associated with conspecifics in cleaner fish Labroides dimidiatus juveniles. Coral Reefs, 31: 1169–1176.

Heatwole, S.J. and C.J. Fulton, 2012. Behavioural flexibility in reef fishes responding to a rapidly changing wave environment. Marine Biology, doi: 10.1007/s00227-012-2123-2.

Heiniger, H. and R.D. Adlard, 2012. Host specificity and local infection dynamics of Kudoa leptacanthae n. sp. (Multivalvulida: Kudoidae) from the pericardial cavity of two Zoramia spp. (Perciformes: Apogonidae) at Lizard Island lagoon, Queensland, Australia. Parasitology International, 61: 697-706.

Hendee, J., L.J. Gramer, S.F. Heron, M. Jankulak, N. Amornthammarong, M. Shoemaker, T. Burgess, J. Fajans, S. Bainbridge and W. Skirving, 2012. Wireless architectures for coral reef environmental monitoring. Proceedings of the 12th International Coral Reef Symposium, Cairns, Australia, 9-13 July 2012.

Huelsken, T., D. Tapken, T. Dahlmann, H. Waegele, C. Riginos and M. Hollmann, 2012. Systematics and phylogenetic species delimitation within Polinices s.l. (Caenogastropoda: Naticidae) based on molecular data and shell morphology. Organisms, Diversity and Evolution, 12: 349-375.

Hughes, T.P, A.H. Baird, E.A. Dinsdale, N.A. Moltschaniwskyj, M.S. Pratchett, J.E. Tanner, and B.L. Willis, 2012. Assembly rules of reef corals are flexible along a steep climatic gradient. Current Biology, doi: 10.1016/j.cub.2012.02.068.

Hunter, J.A., K.A. Hall and T.H. Cribb, 2012. A complex of Transversotrematidae (Platyhelminthes: Digenea) associated with mullid fishes of the Indo-West Pacific Region, including the descriptions of four new species of Transversotrema. Zootaxa, 3266: 1-22.

Jabbar, A., A. Asnoussi, L.J. Norbury, A. Eisenbarth, S. Shamsi, R.B. Gasser, A.L. Lopata and I. Beveridge, 2012. Larval anisakid nematodes in teleost fishes from Lizard Island, northern Great Barrier Reef, Australia. Marine and Freshwater Research, 63: 1283-1299.

Johansen, J.L., 2012. Energetics of habitat use in planktivorous coral reef fishes: does specialization confer sensitivity to changing environmental conditions? PhD thesis, James Cook University.

Lange, R., 2012. Evolutionary ecology of traumatic mating in gastropterid sea slugs. PhD thesis, University of Tuebingen.

Lange, R., J. Beninde, V. Reichel, J. Werminghausen, T. Gerlach and N. Anthes, 2012. Copulation duration does not predict sperm transfer in a marine hermaphrodite. Animal Behaviour, doi: 10.1016/j.anbehav.2011.11.021.

Lange, R., T. Gerlach, J. Beninde, J. Werminghausen, V. Reichel and N. Anthes, 2012. Female fitness optimum at intermediate mating rates under traumatic mating. PLoS One, 7(8): e43234.

Lawton, R.J. and M.S. Pratchett, 2012. Influence of dietary specialization and resource availability on geographical variation in abundance of butterflyfish. Ecology and Evolution, 2(7): 1347-1361.

Leis, J.M. and M.N. Yerman, 2012. Behavior of larval butterflyfishes (Teleostei: Chaetodontidae) at settlement on coral reefs. Copeia, 2012(2): 211-221.

Lonnstedt, O.M., M.I. McCormick and D.P. Chivers, 2012. Degraded environments alter prey risk assessment. Ecology and Evolution, doi: 10.1002/ece3.388.

Lonnstedt, O.M., M.I. McCormick, M.G. Meekan, M.C.O. Ferrari and D.P. Chivers, 2012. Learn and live: predator experience and feeding history determines prey behaviour and survival. Proceedings of the Royal Society B, doi: 10.1098/rsbp.2011.2516.

Maddams, J.C. and M.I. McCormick, 2012. Not all offspring are created equal: variation in larval characteristics in a serially spawning damselfish. PLoS One, 7(11): e48525.

Madin, J.S., A.I. Dell, E.M.P. Madin and M.C. Nash, 2012. Spatial variation in mechanical properties of coral reef substrate and implications for coral colony integrity. Coral Reefs, doi: 10.1007/s00338-012-0958-0.

Madin, J.S., M.O. Hoogenboom and S.R. Connolly, 2012. Integrating physiological and biomechanical drivers of population growth over environmental gradients on coral reefs. Journal of Experimental Biology, 215: 968-976.

Madin, J.S., T.P. Hughes and S.R. Connolly, 2012. Calcification, storm damage and population resilience of tabular corals under climate change. PLoS One, 7(10): e46637.

Manassa, R.P. and M.I. McCormick, 2012. Social learning improves survivorship at a life-history transition. Oecologia, doi 10.1007/s00442-012-2458-x.

Marin, I., 2012. The "Hamopontonia corallicola" Bruce, 1970 species complex (Crustacea, Decapoda, Palaemonidae): new records and new species from the Great Barrier Reef, Australia. Zootaxa, 3272: 35-56.

McCormick, M.I., 2012. Lethal effects of habitat degradation on fishes through changing competitive advantage. Proceedings of the Royal Society B, 279: 3899-3904.

McCormick, M.I. and C.J. Weaver, 2012. It pays to be pushy: intracohort interference competition between two reef fishes. PLoS One, 7(8): e42590.

McHenry, M.J., T. Claverie, M.V. Rosario and S.N. Patek, 2012. Gearing for speed slows the predatory strike of a mantis shrimp. Journal of Experimental Biology, 215: 1231-1245.

McNamara, M.K.A., R.D. Adlard, R.A. Bray, P. Sasal and T.H. Cribb, 2012. Monorchiids (Platyhelminthes: Digenea) of chaetodontid fishes (Perciformes): Biogeographical patterns in the tropical Indo-West Pacific. Parasitology International, 61: 288-306.

Miller, D.A., G. Suen, K.D. Clements and E.R. Angert, 2012. The genomic basis for the evolution of a novel form of cellular reproduction in the bacterium Epulopiscium. BMC Genomics, 13: 265-282.

Miller, T.L. and R.D. Adlard, 2012. Brain infecting kudoids of Australia's coral reefs, including a description of Kudoa lemniscati n. sp. (Myxosporea: Kudoidae) from Lutjanus lemniscatus (Perciformes: Lutjanidae) off Ningaloo Reef, Western Australia. Parasitology International, 61: 333 - 342.

Mitchell, M.D., 2012. The role of chemical alarm cues in risk assessment and predator recognition in coral reef fishes. PhD thesis, James Cook University.

Munday, P.L., M.I. McCormick, M. Meekan, D.L. Dixson, S.-A. Watson, D.P. Chivers and M.C.O. Ferrari, 2012. Selective mortality associated with variation in CO2 tolerance in a marine fish. Ocean Acidification, doi: 10.2478/oac-2012-0001.

Munday, P.L., M.I. McCormick and G.E. Nilsson, 2012. Impact of global warming and rising CO2 levels on coral reef fishes: what hope for the future? Journal of Experimental Biology, 215: 3865-3873.

Nash, M.C., B.N. Opdyke, U. Troitzsch, B.D. Russell, W.H. Adey, A. Kato, G. Diaz-Pulido, C. Brent, M. Gardner, J. Prichard and D.I. Kline, 2012. Dolomite-rich coralline algae in reefs resist dissolution in acidified conditions. Nature Climate Change, doi: 10.1038/NCLIMATE1760.

Nilsson, G.E., D.L. Dixson, P. Domenici, M.I. McCormick, C. Sørensen, S.-A. Watson and P.L. Munday, 2012. Near-future carbon dioxide levels alter fish behaviour by interfering with neurotransmitter function. Nature Climate Change, 2: 201-204.

Paley, A.S. and L.K.Bay, 2012. Bleaching condition varies among Acropora millepora color morphs. Proceedings of the 12th International Coral Reef Symposium, Cairns, Australia, 9-13 July 2012.

Patek, S.N., M.V. Rosario and J.R.A. Taylor, 2012. Comparative spring mechanics in mantis shrimp. Journal of Experimental Biology, doi: 10.1242/jeb.078998.

Pescud, A., 2012. An empirical evaluation of the relationship between coral reef calcium carbonate production and wave energy using geospatial techniques at Lizard Island, Great Barrier Reef, Australia. Honours thesis, University of Wollongong.

Pickens, C., 2012. Novelty interactions between herbivorous fish and Sargassum: insight into macroalgal phase shifts. Undergraduate thesis, School for International Training.

Pink, J.R., 2012. Behavioural modality in swimming and foraging by coral reef fishes. Honours thesis, Australian National University.

Pisapia, C., A.J. Cole and M.S. Pratchett, 2012. Changing feeding preferences of butterflyfishes following coral bleaching. Proceedings of the 12th International Coral Reef Symposium, Cairns, Australia, 9-13 July 2012.

Pollock, F.J., S.M. Katz, D.G. Bourne and B.L. Willis, 2012. Cymo melanodactylus crabs slow progression of white syndrome lesions on corals. Coral Reefs, doi: 10.1007/s00338-012-0978-9.

Pratchett, M.S., D.J. Coker, G.P. Jones and P.L. Munday, 2012. Specialization in habitat use by coral reef damselfishes and their susceptibility to habitat loss. Ecology and Evolution, 2(9): 2168-2180.

Proske, U. and S. Haberle, 2012. Island ecosystem and biodiversity dynamics in northeastern Australia during the Holocene: Unravelling short-term impacts and long-term drivers. The Holocene, 22(10): 1097-1111.

Raihani, N.J., A.S. Grutter and R. Bshary, 2012. Female cleaner fish cooperate more with unfamiliar males. Proceedings of the Royal Society B, doi: 10.1098/rspb.2012.0063.

Raihani, N.J., K. McAuliffe, S.F. Brosnan, and R. Bshary, 2012. Are cleaner fish, Labroides dimidiatus, inequity averse? Animal Behaviour, 84: 665-674.

Rawlinson, K.A. and J.S. Stella, 2012. Discovery of the corallivorous polyclad flatworm, Amakusaplana acroporae, on the Great Barrier Reef, Australia - the first report from the wild. PLoS One, 7(8): e42240.

Richards, Z.T., 2012. A comparison of proxy performance in coral biodiversity monitoring. Coral Reefs, doi 10.1007/s00338-012-0963-3.

Rivera Posada, J.A., 2012. Pathogenesis of Crown-of-Thorns Starfish (Acanthaster planci L.) PhD thesis, James Cook University.

Schmidt-Roach, S., K.J. Miller, E. Woolsey, G. Gerlach and A.H. Baird, 2012. Broadcast spawning by Pocillopora species on the Great Barrier Reef. PLoS One, 7(12): e50847.

Shibukawa, K., T. Suzuki and H. Senou, 2012. Review of the shrimp-associated goby genus Lotilia (Actinopterygii: Perciformes: Gobiidae), with description of a new species from the West Pacific. Zootaxa, 3362: 54-64.

Soares, M.C., R. Bshary, R. Mendonca, A.S. Grutter and R.F. Oliveira, 2012. Arginine vasotocin regulation of interspecific cooperative behaviour in a cleaner fish. PLoS One, 7(7): e39583.

Sprenger, D., N.J. Dingemanse, N.A. Dochtermann, J. Theobald and S.P.W. Walker, 2012. Aggressive females become aggressive males in a sex-changing reef fish. Ecology Letters, 15: 986-992.

Stamps, J.A., M. Briffa and P.A. Biro, 2012. Unpredictable animals: individual differences in intraindividual variability (IIV). Animal Behaviour, 83: 1325-1334.

Stanley, J.A., C.A. Radford and A.G. Jeffs, 2012. Location, location, location: finding a suitable home among the noise. Proceedings of the Royal Society B, 279: 3622-3631.

Stella, J.S., 2012. Evidence of corallivory by the keyhole limpet Diodora galeata. Coral Reefs, 31: 579.

Stemmer, K., I. Burghardt, C. Mayer, G.B. Reinicke, H. Wägele, R. Tollrian and F. Leese, 2012. Morphological and genetic analyses of xeniid soft coral diversity (Octocorallia; Alcyonacea). Organisms, Diversity and Evolution, doi: 10.1007/s13127-012-0119-x.

Strong, L., 2012. Effects of a cymothoid ectoparasite on the turning behavior (lateralization) of he Bridled Monocle Bream, Scolopsis bilineata. Independent study report, School for International Training.

Sun, D., S.P. Blomberg, T.H. Cribb, M.I. McCormick and A.S. Grutter, 2012. The effects of parasites on the early life stages of a damselfish. Coral Reefs, 31: 1065-1075.

Takahashi, M., M.I. McCormick, P.L. Munday and G.P. Jones, 2012. Influence of seasonal and latitudinal temperature variation on early life-history traits of a coral reef fish. Marine and Freshwater Research, 63: 856-864.

Tochilin C., W.R. Dickinson, M.W. Felgate, M. Pecha, P. Sheppard, F.H. Damonc, S. Bickler and G.E. Gehrels, 2012. Sourcing temper sands in ancient ceramics with UePb ages of detrital zircons: a southwest Pacific test case. Journal of Archaeological Science, 39: 2583-2591.

Ward, R.D., 2012. FISH_BOL, a case study for DNA barcodes. Chapter 21 in "DNA Barcodes: Methods and Protocols", W.J. Kreiss and D.L. Erickson (eds.). Methods in Molecular Biology, vol 858. Springer.

Wright, S., 2012. Fixed intertidal biological indicators and Holocene sea-level on the Great Barrier Reef coast. PhD thesis, University of New England.

Young, M.A.L. and D.R. Bellwood, 2012. Fish predation on sea urchins on the Great Barrier Reef. Coral Reefs, 31: 731-738.


LIRS publications in 2011: 123

Aguado, M.T., G. San Martin and M.E. Sidall, 2011. Systematics and evolution of syllids (Annelida: Syllidae). Cladistics, 27: 1-17.

Ang, T.Z. and A. Manica, 2011. Effect of the presence of subordinates on dominant female behaviour and fitness in hjierarchies of the dwarf angelfish Centropyge bicolor. Ethology, 117: 1111-1119.

Anker, A. 2011. Four new infaunal decapod crustaceans (Caridea: Alpheidae and Gebiidea: Axianassidae) from Lizard Island, Australia, one of them also occurring in Moorea, French Polynesia.
Zootaxa, 2734: 1-22.

Anonymous, 2011. Young fish like noisy neighbours; 'Reefs with added noise always attracted more fish'. UnderwaterTimes, http://www.underwatertimes.com/news.php?article_id=12653480109.

Baumann, H. and M. Gagliano, 2011. Changing otolith/fish size ratios during settlement in two tropical damselfishes. Helgoland Marine Research, doi 10.1007/s10152-011-0255-2.

Bay, L.K. and J.M. Caley, 2011. Greater genetic diversity in spatially restricted coral reef fishes suggests secondary contact among differentiated lineages. Diversity, 3: 483-502.

Bellwood, D.R. and J.H. Choat, 2011. Dangerous demographics: the lack of juvenile humphead parrotfishes Bolbometopon muricatum on the Great Barrier Reef. Coral Reefs, 30: 549-554.

Beninde, J., 2011. Sex in a sea slug: is it all about copulation duration? Diploma thesis, University of Tuebingen.

Berumen, M.L., E.D.L. Trip, M.S. Pratchett and J.H. Choat, 2011. Differences in demographic traits of four butterflyfish species between two reefs of the Great Barrier Reef separated by 1,200 km. Coral Reefs, doi: 10.1007/s00338-011-0838-z.

Beukers-Stewart, B., J. Beukers-Stewart and G.P. Jones, 2011. Behavioural and developmental responses of predatory coral reef fish to variation in the abundance of prey. Coral Reefs, 30: 855-864.

Binning, S.A. and C.J. Fulton, 2011. Non-lethal measurement of pectoral fin aspect ratio in coral-reef fishes. Journal of Fish Biology, 79: 812-818.

Bonaldo, R.M., 2011. The ecosystem role of parrotfishes on coral reefs. PhD thesis, James Cook University.

Bonaldo, R.M. and D.R. Bellwood, 2011. Spatial variation in the effects of grazing on epilithic algal turfs on the Great Barrier Reef, Australia. Coral Reefs, 30: 381-390.

Bonaldo, R.M., J.P. Krajewsky and D.R. Bellwood, 2011. Relative impact of parrotfish grazing scars on massive Porites corals at Lizard Island, Great Barrier Reef. Marine Ecology Progress Series, 423: 223-233.

Bongaerts, P., 2011. Bathymetric patterns of genetic variation in the coral-algal symbiosis. PhD thesis, University of Queensland, Brisbane.

Bongaerts, P., C. Riginos, K. Hay, M.J.H. van Oppen, O. Hoegh-Guldberg and S. Dove, 2011. Adaptive divergence in a scleractinian coral: physiological adaptation of Seriatopora hystrix to shallow and deep reef habitats. BMC Evolutionary Biology, 11: 303.

Booth, D.J. and K. Parkinson, 2011. Pelagic larval duration is similar across 23 degrees of latitude for two species of butterflyfish (Chaetodontidae) in eastern Australia. Coral Reefs, doi: 10.1007/s00338-011-0815-6.

Booth, H., 2011. Effects of coral stressing on the feeding preferences of the coral predator, Acanthaster planci. Undergraduate thesis, School for International Training.

Bosiger, Y., 2011. Predator-prey interactions and the effect of daily temporal predation risk of coral reef fish behaviour. Honours thesis, James Cook University.

Brooker, R.M., P.L. Munday and G.P. Jones, 2011. Coral obligate filefish masquerades as a branching coral. Coral Reefs, 30: 803.

Bruce, N.L. and C. Sidabalok, 2011. The genus Lanocira Hansen, 1890 (Corallanidae: Isopoda: Crustacea) in tropical Australian waters. Zootaxa, 2793: 23-34.

Bshary, R., R.F. Oliveira and A.S. Grutter, 2011. Short-term variation in the level of cooperation in the cleaner wrasse Labroides dimidiatus: implications for the role of potential stressors. Ethology, 117: 246-253.

Burger, M.A.A. and R.D. Adlard, 2011. Low host specificity in the Kudoidae (Myxosporea: Multivalvulida) including seventeen new host records for Kudoa thalassomi. Folia Parasitologica 58: 1-16.

Cheney, K.L., 2011. Cleaner wrasse mimics inflict higher costs on their models when they are more aggressive towards signal receivers. Biology Letters, doi; 10.1098/rsbl.2011.0687

Chiou, T.-H., N.J. Marshall, R.L. Caldwell and T.W. Cronin, 2011. Changes in light-reflecting properties of signalling appendages alter mate choice behaviour in a stomatopod crustacean Haptosquilla trispinosa. Marine and Freshwater Behaviour and Ecology, 44: 1-11.

Chong-Seng, K.M., A.J. Cole, M.S. Pratchett and B.L. Willis, 2011. Selective feeding by coral reef fishes on coral lesions associated with brown band and black band disease. Coral Reefs, 30: 473-484.

Clague, G., C. Newport and A.S. Grutter, 2011. Intraspecific cleaning behaviour of adult cleaner wrasse, Labroides dimidiatus (Perciformes: Labridae). Marine Biodiversity Records, doi: 10.1017/s175526721100056X, 4: e56 (3 pages).

Clague, G., K.L. Cheney, A.W. Goldizen, M.I. Waldie and A.S. Grutter, 2011. Long-term cleaner fish presence affects growth of a coral reef fish. Biology Letters, doi: 10.1098/rsbl.2011.0458

Cole, A., 2011. The energetic costs of chronic fish predation on reef-building corals. PhD thesis, James Cook University.

Cole, A.J. and M.S. Pratchett, 2011. Effects of juvenile coral-feeding butterflyfishes on host corals. Coral Reefs, DOI 10.1007/s00338-011-0746-2.

Cole, A.J., R.J. Lawton, S.K. Wilson and M.S. Pratchett, 2011. Consumption of tabular acroporid corals by reef fishes: a comparison with plant-herbivore interactions. Functional Ecology, doi: 10.1111/j.1365-2435.2011.01935.x.

Cole, K.S., 2011. Patterns of reproductive morphology in the genus Gobiodon (Teleostei: Gobiidae). Environmental Biology of Fishes, 92: 323-335.

Cripps, I.L., P.L. Munday and M.I. McCormick, 2011. Ocean acidification affects prey detection by a predatory reef fish. PLoS One, 6(7):e22736 (1-6).

De Wit, P., E. Rota and C. Erseus, 2011. Phylogeny and character evolution in Grania (Annelida, Clitellata). Zoologica Scripta, 40: 509-519.

Devine, B.M., P.L. Munday and G.P. Jones, 2011. Rising CO2 concentrations affect settlement behaviour of larval damselfishes. Coral Reefs, doi: 10.1007/s00338-011-0837-0.

Devine, B.M., P.L. Munday and G.P. Jones, 2011. Homing ability of adult cardinalfish is affected by elevated carbon dioxide. Oecologia, doi: 10.1007/s00442-011-2081-2.

Domenici, P., B. Allan, M.I. McCormick and P.L. Munday, 2011. Elevated carbon dioxide affects behavioural lateralization in a coral reef fish. Biology Letters, doi: 10.1098/rsbl.2011.0591

Downie, A.J., R.A. Bray, B.E.H. Jones and T.H. Cribb, 2011. Taxonomy, host-specificity and biogeography of Symmetrovesicula Yamaguti, 1938 (Digenea: Fellodistomidae) from chaetodontids (Teleostei: Perciformes) in the tropical Indo-west Pacific region. Systematic Parasitology, 78: 1-18.

Ferrari, M.C.O, M.I. McCormick, P.L. Munday, M.G. Meekan, D.L. D ixson, O. Lonnstedt and D.P. Chivers, 2011. Putting prey and predator into the CO2 equation: qualitative and quantitative effects of ocean acidification on predator-prey interactions. Ecology Letters, 14: 1143-1148.

Ferrari, M.C.O., D.L. Dixson, P.L. Munday, M.I. McCormick, M.G. Meekan, A. Sih and D.P. Chivers, 2011. Intrageneric variation in antipredator responses of coral reef fishes affected by ocean acidification: implications for climate change projections on marine communities. Global Change Biology, 17: 2980-2986.

Ford, M.R. and P.S. Kench, 2011. The durability of bioclastic sediments and implications for coral reef deposit formation. Sedimentology, doi: 10.1111/j.1365-3091.2011.01281.x.

Fox, R.J. and D.R. Bellwood, 2011. Unconstrained by the clock? Plasticity of diel activity rhythm in a tropical fish. Functional Ecology, 25: 1096-1105.

Fujii, T., E. Hirose, S. Kashavumurthy, C.A. Chen, W. Zhou and J.D. Reimer, 2011. Coral-killing cyanobacteriosponge (Terpios hoshinota) on the Great Barrier Reef. Coral Reefs, doi 10.1007/s00338-011-0734-6.

Gagliano, M., A.K. Lema, M. Depczynski and S. Whalan, 2011. Use it and lose it: lipofuscin accumulation in the midbrain of a coral reef fish. Journal of Fish Biology, 78: 659-666.

Gaither, M.R., B.W. Bowen, T.-R. Bordernave, L.A. Rocha, S.J. Newman, J.A. Gomez, L. van herwerden and M.T. Craig, 2011. Phylogeography of the reef fish Cephalopholis argus (Epinephelidae) indicates Pleistocene isolation across the Indo-Pacific Barrier with contemporary overlap in the Coral Triangle. BMC Evolutionary Biology, 11: 189, 16 pp.

Glasby, C.J., R.S. Wilson and T. Bakken, 2011. Redescription of the Indo-Pacific polychaete Neanthes pachychaeta (Fauvel, 1918) n. comb. (Annelida, Phyllodocida, Nereididae) and its synonyms. Zoosystema, 33: 361-375.

Gleeson, R. and R. Adlard, 2011. Morphological and genetic analysis of three new species of Ceratomyxa Thelohan, 1892 (Myxozoa: Myxosporea) from carcharhinid sharks off Australia. Systematic Parasitology, 80: 117-124.

Goatley, C.H.R. and D.R. Bellwood, 2011. The roles of dimensionality, canopies and complexity in ecosystem monitoring. PLoS One, 6(11): e27307. doi: 10.1371/journal.pone.0027307.

Hawkins, E.K., J.J. Lee and D.K. Fimiarz, 2011. Colony formation and sexual morphogenesis in the coccolithophore Pleurochrysis sp (Haptophyta). Journal of Phycology, 47: 1344-1349.

Hayes, P.M., N.J. Smit, A.S. Grutter and A.J. Davies, 2011. Unexpected response of a captive blackeye thicklip, Hemigymnus melatperus (Bloch), from Lizard Island, Australia, exposed to juvenile isopods Gnathia aureamaculosa Ferreira & Smit. Journal of Fish Diseases, 34: 563-566.

Heiniger, H., N.L. Gunter and R.D. Adlard, 2011. Re-establishment of the family Coccomyxidae and description of five novel species of Auerbachia and Coccomyxa (Myxosporea: Bivalvulida) parasites from Australian fishes. Parasitology, 138: 501-515.

Hellstrom, M., 2011. Sex and symbionts: new discoveries in local and regional patterns of coral reproduction and ecology. PhD thesis, Stockholm University

Hellstrom, M. and J.A.H. Benzie, 2011. Robustness of size measurement in soft corals. Coral Reefs, 30: 787-790.

Hoey, A.S., D.R. Bellwood and A. Barnett, 2011. To feed or to breed: the morphological constraints of mouthbrooding. Proceedings of the Royal Society B, doi: 10.1098/rspb.2011.2769.

Huelsken, T. H. Waegele, B. Peters, A. Mather and M. Hollmann, 2011. Molecular analysis of adults and egg masses reveals two independent lineages within the infaunal gastropod Naticarius onca (Roeding, 1798) (Caenogastropoda: Naticidae). Molluscan Research, 31(3): 141-151.

Huelsken, T., S. Schreiber and M. Hollmann, 2011. COI amplification from mucus-rich marine gastropods (Gastropoda: Naticidae) depends on DNA extraction method and preserving agent. Mitt. Dtsch. Malakozool. Ges., 85: 17-26.

Jackson, D.J., L. Macis, J. Reitner and G. Wörheide, 2011. A horizontal gene transfer supported the evolution of an early metazoan biomineralization strategy. BMC Evolutionary Biology, 11: 238 (6 pp).

Johansen, J.L. and G.P. Jones, 2011. Increasing ocean temperature reduces the metabolic performance and swimming ability of coral reef damselfishes. Global Change Biology, 17: 2971-2979.

Kerry, J.T. and D.R. Bellwood, 2011. The effect of coral morphology on shelter selection by coral reef fishes. Coral Reefs, doi: 10.1007/s00338-011-0859-7.

Konow, N. and D.R. Bellwood, 2011. Evolution of high trophic diversity based on limited functional disparity in the feeding apparatus of marine angelfishes (f. Pomacanthidae). PLoS One 6(9): e 24113. doi: 10.1371/journal.pone.0024113.

Lawton, R.J., 2011. Geographic variation in ecology of coral feeding butterflyfishes and resilience to large scale disturbances. PhD thesis, James Cook University.

Lawton, R.J., A.J. Cole, M.L. Berumen and M.S. Pratchett, 2011. Geographic variation in resource use by specialist versus generalist butterflyfishes. Ecography, 34: 001-011.

Lawton, R.J., M.S. Pratchett and M.L. Berumen, 2011. The use of specialisation indices to predict vulnerability of coral-feeding butterflyfishes to environmental change. Oikos, doi: 10.1111/j.1600-0706.2011.19409.x.

Lawton, R.J., V. Messmer, M.S. Pratchett and L.K. Bay, 2011. High gene flow across large geographic scales reduces extinction risk for a highly specialised coral feeding butterflyfish. Molecular Ecology, 20: 3584-3598.

Layton, C., 2011. Swimming activities and costs in free-living coral reef wrasses (Labridae). Honours thesis, Australian National University.

Lee, J.J., 2011. Fueled by symbiosis, Foraminifera have evolved to be giant complex protists.In "All Flesh is Grass", eds. Z. Dubinsky and J. Seckbach. Springer, Netherlands.

Lonnstedt, O.M. and M.I. McCormick, 2011. Growth history and intrinsic factors influence risk assessment at a critical life transition for a fish. Coral Reefs, 30: 805-812.

Lonnstedt, O.M. and M.I. McCormick, 2011. Chemical alarm cues inform prey of predation threat: the importance of ontogeny and concentration in a coral reef fish. Animal Behaviour, 82: 213-218.

Lonnstedt, O.M., M.I. McCormick and D.P. Chivers, 2011. Well-informed foraging: damage-released chemical cues of injured prey signal quality and size to predators. Oecologia, doi: 10.1007/s00442-011-2116-8.

Maier, E. A. Buckenmaier, R. Tollrian and B. Nuernberger, 2011. Intracolonial genetic variation in the scleractinian coral Seriatopora hystrix. Coral Reefs, doi: 10.1007/s00338-011-0857-9

Marin, I., 2011. Lacertopontonia chadi gen. et sp. nov., a new oyster-associated Pontonia-like pontoniine shrimp (Crustacea, Decapoda, Palaemonidae) from the Great Barrier Reef of Australia. Zootaxa, 2968: 57-68.

Marin, I., 2011. Two new species of alcyonacean-associated shrimp genus Alcyonohippolyte Marin, Okuno & Chan, 2010 (Crustacea: Decapoda: Hippolytidae) from the Great Barrier Reef of Australia. Zootaxa, 3123: 49-59.

Marin, I. and M.J. Caley, 2011. The diversity of pontoniine shrimps (Crustacea: Decapoda: Palaemonidae) from the Lizard Island area, Great Barrier Reef, Australia. Marine Biodiversity Records, 4: 339. DOI: 10.1017/S1755267211000297.

Marin, I., J. Okuno and T.-Y. Chan, 2011. On the "Hippolyte commensalis Kemp, 1925" species complex (Decapoda, Caridea, Hippolytidae), with the designation of a new genus and description of two new species from the Indo-West Pacific. Zootaxa, 2768: 32-54.

McNamara, M.K.A. and T.H. Cribb, 2011. Taxonomy, host specificity and dietary implications of Hurleytrematoides (Digenea: Monorchiidae) from chaetodontid fishes on the Great Barrier Reef. Parasitology International, 60: 255-269.

Messmer, V., G.P. Jones, P.L. Munday, S.J. Holbrook, R.J. Schmitt and A.J. Brooks, 2011. Habitat biodiversity as a determinant of fish community structure on coral reefs. Ecology, 92(12): 2285-2298.

Milius, S., 2011. Young'uns adrift on the sea. Science News, 15 January 2011, 18-21.

Miller, D.A., J.H. Choat, K.D. Clements and E.R.Angert, 2011. The spoIIE homolog of Epulopiscium sp. Type B is expressed early in intracellular offspring development. Journal of Bacteriology, May 2011: 2642-2646.

Miller, T.L., R.A. Bray and T.H. Cribb, 2011. Taxonomic approaches to and interpretation of hose specificity of trematodes of fishes: lessons from the Great Barrier Reef. Parasitology, 138: 1710-1722.

Mirams, A.G.K., E.A. Treml, J.L. Shields, L. Liggins and C. Riginos, 2011. Vicariance and dispersal across an intermittent barrier: population genetic structure of marine animals across the Torres Strait land bridge. Coral Reefs, 30: 937-949.

Mitchell, M.D., M.I. McCormick, M.C.O. Ferrari and D.P. Chivers, 2011. Coral reef fish rapidly learn to identify multiple unknown predators upon recruitment to the reef. PLoS ONE, 6: e15764.

Mitchell, M.D., M.I. McCormick, M.C.O. Ferrari and D.P. Chivers, 2011. Friend or foe? The role of latent inhibition in predator and non-predator labelling by coral reef fishes. Animal Cognition, 14: 707-714.

Montanari, S.R., L. van Herwerden, M.S. Pratchett, J.-P.A. Hobbs and A. Fugedi, 2011. Reef fish hybridization: lessons learnt from butterflyfishes (genus Chaetodon). Ecology and Evolution, doi: 10.1002/ece3.83.

Pinto, A., J. Oates, A. Grutter and R. Bshary, 2011. Cleaner wrasses Labroides dimidiatus are more cooperative in the presence of and audience. Current Biology, 21: 1140-1144.

Plaisance, L., M.J. Caley, R.E. Brainerd and N. Knowlton, 2011. The diversity of coral reefs: what are we missing? PLoS One, 6(10): e25026. doi: 10.1371/journal.pone.0025026.

Plaisance, L., R. Brainard, M.J. Caley and N. Knowlton, 2011. Using DNA barcoding and standardized sampling to compare geographic and habitat differentiation of crustaceans: a Hawaiian Islands example. Diversity, 4: 581-591.

Radford, C.A., C.T. Tindle, J.C. Montgomery and A.G. Jeffs, 2011. Modelling a reef as an extended sound source increases the predicted range at which reef noise may be heard by fish larvae. Marine Ecology Progress Series, 438: 167-174.

Radford, C.A., J.A. Stanley, S.D. Simpson and A.G. Jeffs, 2011. Juvenile coral reef fish use sound to locate habitats. Coral Reefs, 30: 295-308.

Raihani, N.J., A.I. Pinto, A.S. Grutter, S. Wismer and R. Bshary, 2011. Male cleaner wrasses adjust punishment of female partners according to the stakes. Proceedings of the Royal Society B, doi: 10.1098/rspb.2011.0690.

Rivera-Posada, J.A., M. Pratchett and L. Owens, 2011. Injection of Acanthaster planci with thiosulfate-citrate-bile-sucrose agar (TCBS). II, Histopathological changes. Diseases of Aquatic Organisms, 97: 95-102.

Rivera-Posada, J.A., M. Pratchett, A. Cano-Gomez, J.D. Arango-Gomez and L. Owens, 2011. Injection of Acanthaster planci with thiosulfate-citrate-bile-sucrose agar (TCBS). I. Disease induction. Diseases of Aquatic Organisms, 97: 85-94.

Rivera-Posado, J.A., M. Pratchett, A. Cano-Gomez, J.D. Arango-Gomez and and L. Owens, 2011. Refined identification of Vibrio bacterial flora from Acanthasther planci based on biochemical profiling and analysis of housekeeping genes. Diseases of Aquatic Organisms, 96: 113-123.

Roger, L.M., A.J. Richardson, A.D. McKinnon, B. Knott, R. Matear and C. Scadding, 2011. Comparison of the shell structure of two tropical Thecosomata (Creseis acicula and Diacavolinia longirostris) from 1963 to 2009: potential implications of declining aragonite saturation. ICES Journal of Marine Science, doi: 10.1093/icesjms/fsr171.

Ros, A., P. Vullioud and R. Bshary, 2011. Treatment with the glucocorticoid antagonist RU486 reduces cooperative cleaning visits of a common reef fish, the lined bristletooth. Hormones and Behaviour, doi: 10.1016/j.yhbeh.2011.09.013.

Salwiczek, L. and R. Bshary, 2011. Cleaner wrasses keep track of the "when" and "what" in a foraging task. Ethology, 117: 939-948.

Simpson, S.D., A.N. Radford, E.J. Trickle, M.G. Meekan and A.G. Jeffs, 2011. Adaptive avoidance of noise. PLoS ONE, 6: e16625.

Soares, M.C., R.F. Oliveira, A.F.H. Ros, A.S. Grutter and R. Bshary, 2011. Tactile stimulation lowers stress in fish. Nature Communications, 2: 534, doi: 10.1038/ncomms1547.

Sprenger, D., R. Lange and N. Anthes, 2011. Population density and group size effects on reproductive behavior in a simultaneous hermaphrodite. BMC Evolutionary Biology, 11: 107, 8 pp.

Stella, J.S., P.L. Munday and G.P. Jones, 2011. Effects of coral bleaching on the obligate coral-dwelling crab Trapezia cymodoce. Coral Reefs, 30: 719-727.

Strong, E.E., 2011. More than a gut feeling: utility of midgut anatomy in phylogeny of the Cerithioidea (Mollusca: Caenogastropoda). Zoological Journal of the Linnean Society, 162: 585-630.

Tambutte, S., M. Holcomb, C. Ferrier-Pages, S. Reynaud, E. Tambutte, D. Zoccola and D. Allemand, 2011. Coral biomineralization: from the gene to the environment. Journal of Experimental Marine Biology and Ecology, doi: 10.1016/j.jembe.2011.07.026.

Tang, D., D. Uyeno and K. Nagasawa, 2011. Parasitic copepods of the family Taeniacanthidae (Crustacea) from triggerfishes (Teleostei, Balistidae) and filefishes (Teleostei, Monacanthidae) collected in the Indo-West Pacific region with descriptions of two new species of Taeniacanthus Sumpf, 1871. Zootaxa, 3103: 33-56.

Taylor, J.D., E.A. Glover, L. Smith, P. Dyal and S.T. Williams, 2011. Molecular phylogeny and classification of the chemosymbiotic bivalve family Lucinidae (Mollusca: Bivalvia). Zoological Journal of the Linnean Society, 163: 15-49.

Telford, I.R.H., P. Sebastian, J.J. Bruhl and S.S. Renner, 2011. Cucumis (Cucurbitaceae) in Australia and Eastern Malesia, including newly recognized species and the sister species to C. melo. Systematic Botany, 36: 376-389.

Thacker, C.E., A.R. Thompson and D.M. Roje, 2011. Phylogeny and evolution of Indo-Pacific shrimp-associated gobies (Gobiiformes: Gobiidae). Molecular Phylogenetics and Evolution, 59: 168-176.

Tillbrook, K.J., 2011. A new genus for a unique species of Indo-West Pacific bryozoan. Zootaxa, 3134: 63-67.

Tynan, S. and B. Opdyke, 2011. Effects of lower surface ocean pH upon the stability of shallow water carbonate sediments. Science of the Total Environment, 409: 1082-1086.

Ulstrup, K.E., M. Kuehl, M.J.H. Van Oppen, T.F. Cooper and P.J. Ralph, 2011. Variation in photosynthesis and respiration in geographically distinct populations of two reef-building coral species. Aquatic Biology, 12: 241-248.

Vail, A.L. and M.I. McCormick, 2011. Metamorphosing reef fishes avoid predator scent when choosing a home. Biology Letters, doi: 10.1098/rsbl.2011.0380.

Van der Meer, M.H., M.G. Gardner, J.-P.A. Hobbs, G.P. Jones and L. van Herwerden, 2011. Identification of seventeen microsatellite markers for conservation genetic studies of the endemic anemonefish, Amphiprion mccullochi. Conservation Genetics Resources, doi: 10.1007/s12686-011-9517-1.

Villacorta-Rath, A.C., 2011. Determinates of selective mortality during the early life history of Spratelloides delicatulus in the northern Great Barrier Reef. Masters thesis, James Cook University.

Waegele, H., O. Deutsch, K. Haendeler, R. Martin, V. Schmitt, G. Christa, B. Pinzger, S.B. Gould, T. Dagan, A. Klussmann-Kolb and W. Martin, 2011. Transcriptomic evidence that longevity of acquired plastids in the photosynthetic slugs Elysia timida and Plakobranchus ocellatus does not entail lateral transfer of algal nuclear genes. Molecular Biology and Evolution, 28: 699-706.

Waldie, P.A., S.P. Blomberg, K.L. Cheney, A.W. Goldizen and A.S. Grutter, 2011. Long-term effects of the cleaner fish Labroides dimidiatus on coral reef fish communities. PLoS One, 6: e21201. doi: 10.1371/journal.pone.0021201.

Wenger, A.S. J.L. Johansen and G.P. Jones, 2011. Suspended sediment impairs habitat choice and chemosensory discrimination in two coral reef fishes. Coral Reefs, 30: 879-887.

Williams, B.L., V. Lovenburg, C.L. Huffard and R.L. Caldwell, 2011. Chemical defense in pelagic octopus paralarvae: tetrodotoxin alone does not protect individual paralarvae of the greater blue-ringed octopus (Hapalochlaena lunulata) from common reef predators. Chemoecology, 21: 131-141.

Wilson, G.D.F, C.A. Sims and A.S. Grutter, 2011. Toward a taxonomy of the Gnathiidae (Isopoda) using juveniles: the external anatomy of Gnathia aureamaculosa zuphea stages using scanning electron microscopy. Journal of Crustacean Biology, 31(3): 509-522.

Wismer, S., 2011. Environmental influence on cognition and cooperation in bluestreak cleaner wrasse (Labroides dimidiatus). MSc thesis, University of Zurich.

Wombacher, F., A. Eisenhauer, F. Boehm, N. Gussone, M. Regenberg, W.-C. Dullo and A. Rueggeberg, 2011. Magnesium stable isotope fractionation in marine biogenic calcite and aragonite. Geochimica et Cosmochimica Acta, 75: 5797-5818.

Wong, M.Y.L., 2011. Group size in animal societies: the potential role of social and ecological limitations in the group-living fish, Paragobiodon xanthosomus. Ethology, 117: 638-644.

Wright, K.J., D.M. Higgs and J.M. Leis, 2011. Ontogenetic and interspecific variation in hearing ability in marine fish larvae. Marine Ecology Progress Series, 424: 1-13.

Yong, R.Q.Y. and T.H. Cribb, 2011. Rhaphidotrema kiatkiongi, a new genus and species of blood fluke (Digenea: Aporocotylidae) from Arothron hispidus (Osteichthyes: Tetraodontidae) from the Great Barrier Reef, Australia. Folia Parasitologica, 58(4): 273–277.

Young, M.A.L. and D.R. Bellwood, 2011. Diel patterns in sea urchin activity and predation on sea urchins on the Great Barrier Reef. Coral Reefs, 30: 729-736.

Ziegler, M. and S. Uthicke, 2011. Photosynthetic plasticity of endosymbionts in larger benthic coral reef Foraminifera. Journal of Experimental Marine Biology and Ecology, 407: 70-80.


LIRS publications in 2010: 87

Ang, T.Z., 2010. Social conflict resolution in groups of the angelfish Centropyge bicolor. PhD thesis, University of Cambridge.

Ang, T.Z. and A. Manica, 2010. Aggression, segregation and stability in a dominance hierarchy. Proceedings of the Royal Society B, 277:1337-1343.

Ang, T.Z. and A. Manica, 2010. Unavoidable limits on group size in a body size-based linear hierarchy. Behavioural Ecology, doi:10.1093/beheco/arq062.

Ang, T.Z. and A. Manica, 2010. Benefits and costs of dominance in the angelfish Centropyge bicolor. Ethology, 116: 1-11.

Anker, A., 2010. New findings of rare or little-known alpheid shrimp genera (Crustacea, Decapoda) in Moorea, French Polynesia. Zootaxa, 2403: 23-41.

Barnett, L.J., T.L. Miller and T.H. Cribb, 2010. Two new Stephanostomum-like cercariae (Digenea: Acanthocolpidae) from Nassarius dorsatus and N. olivaceus (Gastropoda: Nassariidae) in central Queensland, Australia. Zootaxa, 2445: 35-52.

Biro, P.A., C. Beckmann and J.A. Sharp, 2010. Small within-day increases in temperature affects boldness and alters personality in coral reef fish. Proceedings of the Royal Society B, 277: 71-77.

Bonaldo, R.M and D.R. Bellwood, 2010. Parrotfish predation on massive Porites on the Great Barrier Reef. Coral Reefs, doi 10.1007/s00338-010-0669-3.

Bongaerts, P. C. Riginos, T. Ridgway, E. Sampayo, M. J. H. van Oppen, N. Englebert, F. Vermeulen and O. Hoegh-Guldberg, 2010. Genetic divergence across habitats in the widespread coral Seriatopora hystrix and its associated Symbiodinium. PLoS One, 5: e10871.

Bray, R.A., T.H. Cribb and J.-L. Justine, 2010. Diploproctodaeum spp. (Digenea, Lepocreadiidae) in Australian and New Caledonian waters including two new species from Tetraodontiformes and new records of related species. Acta Parasitologica, 55: 313-326.

Bray, R.A., T.H. Cribb and J.-L. Justine, 2010. Multitestis Manter 1931 (Digenea: Lepocreadiidae) in ephippid and chaetodontid fishes (Perciformes) in the south-western Pacific Ocean and the Indian Ocean off Western Australia. Zootaxa, 2427: 36-46.

Burger, M.A.A. and R.D. Adlard, 2010. Four new species of Kudoa Meglitsch, 1947 (Myxosporea: Multivalvulida) from Australia with recommendations for species descriptions in the Kudoidae. Parasitology, 137: 793-814.

Burger, M.A.A. and R.D. Adlard, 2010. Phenotypic variation in a significant spore character in Kudoa (Myxosporea: Multivalvulida) species infecting brain tissue. Parasitology, 137: 1759-1772.

Byrne, M., F. Rowe and S. Uthicke, 2010. Molecular taxonomy, phylogeny and evolution in the family Stichopodidae (Aspidochirota: Holothuroidea) based on COI and 16S mitochondrial DNA. Molecular Phylogenetics and Evolution, doi: 10.1016/j.ympev.2010.04.013.

Cheney, K.L., 2010. Multiple selective pressures apply to a coral reef fish mimic: a case of Batesian-aggressive mimicry. Proceedings of the Royal Society B, doi 10.1098/rspb.2009.2218.

Cole, A.J., R.J. Lawton, M.S. Pratchett and S.K. Wilson, 2010. Chronic coral consumption by butterflyfishes. Coral Reefs, doi 1007/s00338-010-0674-6.

Cole, K.S., 2010. Gonad development in hermaphroditic gobies. Chapter 6 in "Reproduction and sexuality in marine fishes. K.S. Cole (Ed.). University of California Press, Berkeley.

Cole, K.S., 2010. Gonad morphology in hermaphroditic gobies. Chapter 5 in "Reproduction and sexuality in marine fishes. K.S. Cole (Ed.). University of California Press, Berkeley.

Cortesi, F. and K.L. Cheney, 2010. Conspicuousness is correlated with toxicity in marine opisthobranchs. Journal of Evolutionary Biology, 23: 1509-1518.

Curtis, L.M., 2010. Haemogregarine blood parasites in triggerfish and surgeonfish: distribution, transmission and implications for their host fish. PhD thesis, University of Queensland.

Deveney, M.R. and I.D. Whittington, 2010. Three new species of Benedenia Diesing, 1858 from the Great Barrier Reef, Australia with a key to species of the genus. Zootaxa, 2348: 1-22.

Erséus, C., E. Rota, L. Matamoros and P. De Wit, 2010. Molecular phylogeny of Enchytraeidae (Annelida, Clitellata). Molecular Phylogenetics and Evolution, 57: 849-858.

Fabricius, K.E., K. Okaji and G. De'ath, 2010. Three lines of evidence to link outbreaks of the crown-of-thorns seastar Acanthaster planci to the release of larval food limitation. Coral Reefs, 29: 593-605.

Farnsworth, C.A., D.R. Bellwood and L. van Herwerden, 2010. Genetic structure across the GBR: evidence from short-lived gobies. Marine Biology, 157: 945-953.

Fisher, R. and J.M. Leis, 2010. Swimming speeds in larval fishes: from escaping predators to the potential for long distance migration. Chapter 11 (pp. 333-373) in: Fish locomotion: an eco-ethological perspective. Eds.: P. Domenici and B.G. Kapoor. Science Publishers: Enfield, NH, USA.

Ford, M.R., 2010. Sedimentological implications of durability and physical taphonomic processes on a fringing reef, Lizard Island, Australia. PhD thesis, University of Auckland.

Fuiman, LA., M.G. Meekan and M.I. McCormick, 2010. Maladaptive behavior reinforces a recruitment bottleneck in newly settled fishes. Oecologia, 164: 99-108.

Fulton, C.J., 2010. The role of swimming in reef fish ecology. Chapter 12 (pp. 374-406) in: Fish locomotion: an eco-ethological perspective. Eds.: P. Domenici and B.G. Kapoor. Science Publishers: Enfield, NH, USA.

Gagliano, M., M.I. McCormick, J.A. Moore and M. Depczynski, 2010. The basics of acidification: baseline variability of pH on Australian coral reefs. Marine Biology, 157: 1849-1856.

Gaither, M.R., R.J. Toonen, D.R. Robertson, S. Planes and B.W. Bowden, 2010. Genetic evaluation of marine biogeographical barriers: perspectives from two widespread Indo-Pacific snappers (Lutjanus kasmira and Lutjanus fulvus). Journal of Biogeography, 37: 133-147.

Gardiner, N.M., 2010. Habitat specialisation, niche overlap and site fidelity in a vulnerable family of coral reef fishes - the cardinalfish (Apogonidae). PhD thesis, James Cook University.

Gardiner, N.M. and G.P. Jones, 2010. Synergistic effects of habitat preference and gregarious behaviour on habitat use in coral reef cardinalfish. Coral Reefs, 29: 845-856.

Gardiner, N.M., P.L. Munday and G.E. Nilsson, 2010. Counter-gradient variation in respiratory performance of coral reef fishes at elevated temperatures. PLoS One, 5: e13299.

Goatley, C.H.R and D.R. Bellwood, 2010. Biologically mediated sediment fluxes on coral reefs: sediment removal and off-reef transportation by the surgeonfish Ctenochaetus striatus. Marine Ecology Progress series, 415: 237-245.

Greenfield, D.W. and J.E. Randall, 2010. Eviota karaspila, a new gobiid fish from Fiji (Teleostei: Gobiidae). Zootaxa, 2672: 61-68.

Grutter, A.S., J.G. Rumney, T. Sinclair-Taylor, P. Waldie and C.E. Franklin, 2010. Fish mucous cocoons: the 'mosquito nets' of the sea. Biology Letters, doi: 10.1098/rsbl.2010.0916.

Grutter, A.S., 2010. Cleaner fish. Current Biology, 20: R547-R549.

Grutter, A.S., A.J. Crean, L.M. Curtis, A.M. Kuris, R.R. Warner and M.I. McCormick. 2010. Indirect effects of an ectoparasite reduce successful establishment of a damselfish at settlement. Functional Ecology, doi: 10.1111/j.1365-2435.2010.01798.x.

Gunter, N.L., M.A.A. Burger and R.D. Adlard, 2010. Morphometric and molecular characterisation of four new Ceratomyxa species (Myxosporea: Bivalvulida: Ceratomyxidae) from fishes off Lizard Island, Australia. Folia Parasitologica, 57: 1-10.

Haendeler, K., H. Waegele, U. Wahrmund, M. Ruedinger and V. Knoop, 2010. Slugs' last meals: molecular identification of sequestered chloroplasts from different algal origins in Sacoglossa (Opisthobranchia, Gastropoda). Molecular Ecology Resources, doi: 10.1111/j.1755-0998.2010.02853.x.

Heenan, A., 2010. The behaviour of settling coral reef fishes and supplementary management tools. PhD thesis, University of Edinburgh.

Hellstrom, M., K.D. Kavanagh and J.A.H. Benzie, 2010. Multiple spawning events and sexual reproduction in the octocoral Sarcophyton elegans (Cnidaria: Alcyonacea) on Lizard Island, Great Barrier Reef. Marine Biology, 157: 383-392.

Heron, S.F., B.L. Willis, W.J. Skirving, C.M. Eakin, C.A. Page and I.R. Miller, 2010. Summer hot snaps and winter conditions: modelling white syndrome outbreaks on Great Barrier Reef corals. PLoS One, 5(8): e12210. doi:10.1371/journal.pone.0012210.

Hoey, A.S., 2010. The ecosystem role of macroalgal browsing fishes on coral reefs. PhD thesis, James Cook University.

Hoey, A.S. and D.R. Bellwood, 2010. Cross-shelf variation in browsing intensity on the Great Barrier Reef. Coral Reefs, 29: 499-508.

Hoey, A.S. and D.R. Bellwood, 2010. Damselfish territories as a refuge for macroalgae on coral reefs. Coral Reefs, 29: 107-118.

Holcomb, M., 2010. Coral calcification: insights from inorganic experiments and coral responses to environmental variables. PhD thesis, Massachusetts Institute of Technology and Woods Hole Oceanographic Insititution.

Holmes, T.H. & M.I. McCormick, 2010. Smell, learn and live: the role of chemical alarm cues in predator learning during early life history in a marine fish. Behavioural Processes, 83: 299-305.

Holmes, T.H. and M.I. McCormick, 2010. Response across a gradient: behavioural reactions of newly settled fish to predation cues. Animal Behaviour, doi: 10.1016.j.anbehav.2010.11.019

Holmes, T.H. and M.I. McCormick, 2010. Size-selectivity of predatory reef fish on juvenile prey. Marine Ecology Progress Series, 399: 273-283.

Huffard, C.L., N. Saarman, H. Hamilton and W.B. Simpson, 2010. The evolution of conspicuous facultative mimicry in octopuses: an example of secondary adaptation? Biological Journal of the Linnean Society, 101: 68-77.

Hunter, J.A., E. Ingram, R.D. Adlard, R.A. Bray and T.H. Cribb, 2010. A cryptic complex of Transversotrema species (Digenea: Transversotrematidae) on labroid, haemulid and lethrinid fishes in the Indo-West Pacific region, including the description of three new species. Zootaxa, 2652: 17-32.

Ilagen, R.P, E. Rhoades, D.F. Gruber, H.-T. Kao, V.A. Pieribone and L. Regan, 2010. A new bright green-emitting fluorescent protein - engineered monomeric and dimeric forms. FEBS Journal, 277: 1967-1978.

Jones, D.B., D.R. Jerry, M.I. McCormick and L.K. Bay, 2010. The population genetic structure of a common tropical damselfish on the Great Barrier Reef and eastern Papua New Guinea. Coral Reefs, 29: 455-467.

Lattig, P., D. Martin and G. San Martin, 2010. Syllinae (Syllidae: Polychaeta) from Australia. Part 4. The genus Haplosyllis Langerhans, 1879. Zootaxa, 2552: 1-36.

Lawton, R.J., M.S. Pratchett and L.K. Bay, 2010. Cross-species amplification of 44 microsatellite loci developed for Chaetodon trifascialis, C. lunulatus and C. vagabundus in 22 related butterflyfish species. Molecular Ecology Resources, doi: 10.1111/j.1755-0998.2010.02919.x.

Lawton, R.J., M.S. Pratchett and L.K. Bay, 2010. Isolation and characterization of 29 microsatellite loci for studies of population connectivity in the butterflyfishes Chaetodon trifascialis and Chaetodon lunulatus. Conservation Genetics Resources, 2: 209-213.

Leis, J.M., 2010. Ontogeny of behaviour in larvae of marine demersal fishes. Icthyological Research, DOI 10.1007/s10228-010-0177-z.

Lowry, J.K. and R. Peart, 2010. The genus Microrchestia (Amphipoda: Talitridae) in eastern Australia. Zootaxa, 2349: 21-38.

McCormick, M.I. and M.G. Meekan, 2010. The importance of attitude: the influence of behaviour on survival at an ontogenetic boundary. Marine Ecology Progress Series, 407:173-185.

McCormick, M.I., C.A. Ryen, P.L. Munday and S.P.W. Walker, 2010. Differing mechanisms underlie sexual size-dimorphism in two populations of a sex-changing fish. PLoS One, 5: e10616.

McCormick, M.I., J.A.Y. Moore and P.L. Munday, 2010. Influence of habitat degradation on fish replenishment. Coral Reefs, doi 10.1007/s00338-010-0620-7.

Meekan, M.G., C. von Kuerthy, M.I. McCormick and B. Radford, 2010. Behavioural mediation of the costs and benefits of fast growth in a marine fish. Animal Behaviour, 79: 803-809.

Messmer, V., 2010. From genes to ecosystems: patterns, processes and consequences of declining biodiversity in coral reef fish communities. PhD thesis, James Cook University.

Miller, T.L., R.D. Adlard, R.A. Bray, 2010. Cryptic species of Euryakaina n. g. (Digenea: Cryptogonimidae) from sympatric lutjanids in the Indo-West Pacific. Systematic Parasitology, 77: 185-204.

Miller, T.L., R.A. Bray, J.-L. Justine and T.H. Cribb, 2010. Varialvus gen. nov. (Digenea, Cryptogonimidae), from species of Lutjanidae (Perciformes) off the Great Barrier Reef, New Caledonia and the Maldives. Acta Parasitologica, 55(4): 327-339.

Munday, P.L., D.L. Dixson, M.I. McCormick, M. Meekan, M.C.O. Ferrari and D.P. Chivers, 2010. Replenishment of fish populations is threatened by ocean acidification. Proceedings of the National Academy of Sciences, doi 10.1073/pnas.1004519107.

Nilsson, G.E and D.J. Randall, 2010. Adaptations to hypoxia in fishes. Chapter 5 in "Respiratory physiology of vertebrates: life with and without oxygen", ed. G.E. Nilsson. Cambridge University Press.

Nilsson, G.E., S. Ostlund-Nilsson and P.L. Munday, 2010. Effects of elevated temperature on coral reef fishes: loss of hypoxia tolerance and inability to acclimate. Comparative Biochemistry and Physiology, Part A, 156: 389-393.

Porter, M.L., Y. Zhang, S. Desai, R.L. Caldwell and T.W. Cronin, 2010. Evolution of anatomical and physiological specialization in the compound eyes of stomatopod crustaceans. Journal of Experimental Biology, 213: 3473-3486.

Pratchett, M.S., 2010. Changes in coral assemblages during an outbreak of Acanthaster planci at Lizard Island, northern Great Barrier Reef (1995-1999). Coral Reefs, 29: 717-725.

Quere, G. and J.M. Leis, 2010. Settlement behaviour of larvae of the stripey snapper, Lutjanus carponotatus (Teleostei: Lutjanidae). Environmental Biology of Fishes, 88: 227-238.

Raihani, N.J., A.S. Grutter and R. Bshary, 2010. Punishers benefit from third-party punishment in fish.
Science, 327: 171.

Siebeck, U.E., A.N. Parker, D. Sprenger, L.M. Maethger and G. Wallis, 2010. A species of reef fish that uses ultraviolet patterns for covert face recognition. Current Biology, 20: 407-410.

Simpson, S.D., M.G. Meekan, N.J. Larsen, R.D. McCauley and A. Jeffs, 2010. Behavioral plasticity in larval reef fish: orientation is influenced by recent acoustic experiences. Behavioral Ecology, 21: 1098-1105.

Sprenger, D., R. Lange, N.K. Michiels and N. Anthes, 2010. Sources of phenotypic variance in egg and larval traits in a marine invertebrate. Evolutionary Ecology, 24: 185-194.

Stanley, J.A., C.A. Radford, and A.G. Jeffs, 2010. Induction of settlement in crab megalopae by ambient underwater reef sound. Behavioural Ecology, 21: 113-120.

Stella, J.S., G.P. Jones and M.S. Pratchett, 2010. Variation in the structure of epifaunal invertebrate assemblages among coral hosts. Coral Reefs, doi 10.1007/s00338-010-0648-8.

Thacker, C.E., A.R. Thompson, T.C. Adam and J.-P. Chen, 2010. Phylogeny and character evolution in the Indo-Pacific genus Ctenogobiops (Gobiiformes: Gobiidae). Ichthyological Research, 57: 231-239.

Uthicke, S. M. Byrne and C. Conand, 2010. Genetic barcoding of commercial beche-de-mer species (Echinodermata: Holothuroidea). Molecular Ecology Resources, 10: 634-646.

Waegele, H., K. Stemmer, I. Burghardt and K. Haendeler, 2010. Two new saccoglassan sea slug species (Opisthobranchia, Gastropoda): Ercolania annelyleorum sp. nov. (Limapontioidea) and Elysia asbecki sp. nov. (Plakobranchoidea), with notes on anatomy, histology and biology. Zootaxa, 2676: 1-28.

Waegele, H., M.J. Raupach, I. Burghardt, Y. Grzymbowski and K. Haendeler, 2010. Solar powered seaslugs (Opisthobranchia, Gastropoda, Mollusca): incorporation of photosynthetic units: a key character enhancing radiation? In: M. Glaubrecht (ed.), "Evolution in Action", Springer-Verlag: Berlin. doi 10.1007/978-3-642-12425-9_13.

Walker , S.P.W., L. Thibault and M.I McCormick, 2010. Density-dependent sex ratio adjustment and the Allee effect: a model and a test using a sex-changing fish. The American Naturalist, 176: (10 pp).

Winters, K.L., L. van Herwerden, J.H. Choat and D.R. Robertson, 2010. Phylogeography of the Indo-Pacific parrotfish Scarus psittacus: isolation generates distinctive peripheral populations in two oceans. Marine Biology, doi 10.1007/s00227-010-1442-4.

Wong, M.Y.L., 2010. Ecological constraints and benefits of philopatry promote group-living in a social but non-cooperatively breeding fish. Proceedings of the Royal Society B, 277:353-358.

Wright, K.J., D.M. Higgs, D.H. Cato and J.M. Leis, 2010. Auditory sensitivity in settlement-stage larvae of coral reef fishes. Coral Reefs, 29: 235-243.


LIRS publications in 2009: 85

Affeld, S., S. Kehraus, H. Waegele and G.M. Koenig, 2009. Dietary derived sesquiterpenes from Phyllodesmium lizardensis. Journal of Natural Products, 72: 298-300.

Ball, A.D., K.J. Purdy, E.A. Glover and J.D. Taylor, 2009. Ctenidial structure and three bacterial symbiont morphotypes in Anodontia (Euanodontia) ovum (Reeve, 1850) from the Great Barrier Reef, Australia (Bivalvia: Lucinidae). Journal of Molluscan Studies, 75: 175-185.

Barneche, D.R., S.R. Floeter, D.M. Ceccarelli, D.M.B. Fresnel, D.F. Dinslaken, H.F.S. Mario and C.E.L. Ferreira, 2009. Feeding macroecology of territorial damselfishes (Perciformes: Pomacentridae). Marine Biology, 156: 289-299.

Barton, D.P., C. Beaufrere, J.-L. Justine and I.D. Whittington, 2009. Polyopisthocotylean monogeneans from carangid fishes off Queensland, Australia and New Caledonia, with a description of Heteromicrocotyloides megaspinosus. Acta Parasitlogica, 54: 205-217.

Bellwood, D.R., S. Klanten, P.F. Cowman, M.S. Pratchett, N. Konow and L. van Herwerden, 2009. Evolutionary history of the butterflyfishes (f: Chaetodontidae) and the rise of coral feeding fishes. Journal of Evolutionary Biology, doi 10.1111/j.1420-9101.2009.01904.x.

Blazewicz-Paszkowycz, M. and K. Zemko, 2009. A new species of Metatanais Shiino, 1952 (Crustacea, Tanaidacea, Paratanaoidea) from Australian coral reefs, with a redefinition of the genus. ZooKeys, 18: 129-141.

Bleidorn, C. N. Hill, C. Erseus and R. Tiedeman, 2009. On the role of character loss in orbiniid phylogeny (Annelida): molecules vs. morphology. Molecular Phylogenetics and Evolution, 52: 57-69.

Bott, N.J. and T.H. Cribb, 2009. Prosorhynchine trematodes (Digenea: Bucephalidae) from epinephelines (Perciformes: Serranidae) on the Great Barrier Reef, Australia. Systematic Parasitology, 72: 57-69.

Bray, R., A. Waeschenbach, T.H. Cribb, G.D. Weedall, P. Dyal and D.T.J. Littlewood, 2009. The phylogeny of the Lepocreadioidea (Platyhelminthes, Digenea) inferred from nuclear and mitochondrial genes: implications for their systematics and evolution. Acta Parasitologica, 54: 310-329.

Bray, R.A., T.H. Cribb and J.-L. Justine, 2009. New observations on the genus Hypocreadium Ozaki (Digenea: Lepocreadiidae) in the Indo-West Pacific region, including the description of one new species. Zootaxa, 2110: 22-40.

Bruce, N.L., 2009. A new species of Joeropsis Koehler, 1885 (Isopoda, Asellota, Joeropsidae) from the Great Barrier Reef, Australia. Crustaceana, 82: 803-813.

Bruce, N.L., 2009. A new genus and new species of Sphaeromatidae (Crustacea: Isopoda) from the Great Barrier Reef, Australia. Memoirs of Museum Victoria, 66: 35-42.

Capa, M. and A. Murray, 2009. Review of the genus Megalomma (Polychaeta: Sabellidae) in Australia with description of three new species, new records and notes on certain features with phylogenetic implications. Records of the Australian Museum, 61: 201-224.

Cheney, K.L. and N.J. Marshall, 2009. Mimicry in coral reef fish: how accurate is this deception in terms of color and luminance? Behavioral Ecology, 20: 459-477.

Cheney, K.L., A.S. Grutter, S.P. Blomberg and N.J. Marshall, 2009. Blue and yellow signal cleaning behaviour in coral reef fishes. Current Biology, 19: 1283-1287.

Cheney, K.L., C. Skogh, N.S. Hart and N.J. Marshall, 2009. Mimicry, colour forms and spectral sensitivity of the bluestriped fangblenny, Plagiotremus rhinorhynchos. Proceedings of the Royal Society B, 276: 1565-1573.

Cheroske, A.G., T,W. Cronin, M.F. Durham and R.L. Caldwell, 2009. Adaptive signaling behavior in stomatopods under varying light conditions. Marine and Freshwater Behaviour and Physiology, 42: 219-232.

Clague, G.E., 2009. The long-term effects of cleaner fish presence on ectoparasites, condition and growth of coral reef fish. Honours thesis, University of Queensland.

Coetzee, M.L., N.J. Smit, A.S. Grutter and A.J. Davies, 2009. Gnathia trimaculata n. sp. (Crustacea: Isopoda: Gnathiidae), an ectoparasite found parasitising requiem sharks from off Lizard Island, Great Barrier Reef, Australia. Systematic Parasitology, 72: 97-112.

Coker, D.J., M.S. Practhett and P.L. Munday, 2009. Coral bleaching and habitat degradation increase susceptibility to predation for coral-dwelling fishes. Behavioral Ecology, doi: 10.1093/beheco/arp113

Coker, D.J., M.S. Pratchett and P.L. Munday, 2009. Does body colouration influence predation risk of coral-dwelling reef fish in bleached landscapes? Proceedings of the 11th International Coral Reef Symposium, Ft. Lauderdale, Florida, July 2008: 1281-1285.

Cole, A.J., K.M. Chong-Seng, M.S. Pratchett and G.P. Jones, 2009. Coral-feeding fishes slow progression of black-band disease. Coral Reefs, doi 10.1007/s00338-009-0519-3.

Cole, K.S., 2009. Modifications of the reproductive complex and implications for the reproductive biology of Gobiodon oculolineatus (Teleostei: Gobiidae). Environmental Biology of Fishes, 84: 261-273.

Cooper, W.J., L.L. Smith and M.W. Westneat, 2009. Exploring the radiation of a diverse reef fish family: Phylogenetics of the damselfishes (Pomacentridae), with new classifications based on molecular analyses of all genera. Molecular Phylogenetics and Evolution, 52: 1-16.

Cooper, W.J. and M.W. Westneat, 2009. Form and function of damselfish skulls: rapid and repeated evolution into a limited number of trophic niches. BMC Evolutionary Biology, 9: 24 doi:10.1186/1471-2148-9-24.

Cumming, R.L., 2009. Case study: impact of Drupella spp. on reef-building corals of the Great Barrier Reef. Great Barrier Reef Marine Park Authority Research Publication 97.

Davies, A.J., L. Curtis, A.S. Grutter and N.J. Smit, 2009. Suspected viral erythrocytic necrosis (VEN) in a juvenile blackbar triggerfish, Rhinecanthus aculeatus, from Lizard Island, Great Barrier Reef, Australia. Marine Biodiversity Records, 2: e149.

De Wit, P., E. Rota and C. Erseus, 2009. Grania (Annelida: Clitellata: Enchytraeidae) of the Great Barrier Reef, Australia, including four new species and a re-description of Grania trichaeta Jamieson, 1977. Zootaxa, 2165: 16-38.

Eckes, M., 2009. The ecological function of fish mucus. PhD thesis, University of Queensland.

Ferreira, M.L., N.J. Smit, A.S. Grutter and A.J. Davies, 2009. A new species of gnathiid (Crustacea: Isopoda) parasitizing teleosts from Lizard Island, Great Barrier Reef, Australia. Journal of Parasitology, 95: 1066-1075.

Fogelman, R.M., A.M. Kuris and A.S. Grutter, 2009. Parasitic castration of a vertebrate: effect of the cymothoid isopod, Anilocra apogonae, on the five-lined cardinalfish, Cheilodipterus quinquelineatus. International Journal for Parsitology, 39: 577-583.

Fox, R.J., T.L. Sunderland, A.S. Hoey and D.R. Bellwood, 2009. Estimating ecosystem function: contrasting roles of closely related herbivorous rabbitfishes (Siganidae) on coral reefs. Marine Ecology Progress Series, 385: 261-260.

Gagliano, M., W.C. Dunlap, R. de Nys and M. Depczynski, 2009. Ockham's razor gone blunt: coenzymeQ adaptation and redox balance in tropical reef fishes. Biology Letters, 5: 360-363.

Gagliano, M. and M.I. McCormick, 2009. Hormonally mediated maternal effects shape offspring survival potential in stressful environments. Oecologia, 160: 657-665.

Goatley, C.H.R. and D.R. Bellwood, 2009. Morphological structure in a reef fish assemblage. Coral Reefs, doi 10.1007/s00338-009-0477-9

Gonzalez-Cabello, A. and D.R. Bellwood, 2009. Local ecological impacts of regional biodiversity on reef fish assemblages. Journal of Biogeography, 36: 1129-1137.

Gruber, D.F., R. DeSalle, E.K. Lienau, D. Tchernov, V.A. Pieribone and H.-T. Kao, 2009. Novel internal regions of fluorescent proteins undergo divergent evolutionary patterns. Molecular Biology and Evolution, 26: 2841-2848.

Grutter, A.S., T.H. Cribb, H. McCallum, J.L. Pickering and M.I. McCormick, 2009. Effects of parasites on larval and juvenile stages of the coral reef fish Pomacentrus moluccensis. Coral Reefs, 29: 31-40.

Guerra-Garcia, J.M. and J.M. Tierno de Figueroa, 2009. What do caprellids (Crustacea: Amphipoda) feed on? Marine Biology, 156: 1881-1890.

Gunter, N.L. and R.D. Adlard, 2009. Seven new species of Ceratomyxa Thelohan, 1892 (Myxozoa) from the gall-bladders of serranid fishes from the Great Barrier Reef, Australia. Systematic Parasitology, 73: 1-11.

Gunter, N.L., C.M. Whipps and R.D. Adlard, 2009. Ceratomyxa (Myxozoa: Bivalvulida): robust taxon or genus of convenience? International Journal for Parasitology, 39: 1395-1405.

Haendler, K., Y.P. Grzymbowski, P.J. Krug and H. Waegele, 2009. Functional chloroplasts in metazoan cells - a unique evolutionary strategy in animal life. Frontiers in Zoology, 6: 28 (18 pages).

Heenan, A., S.D. Simpson and V.A. Braithwaite, 2009. Testing the generality of acoustic cue use at settlement in larval coral reef fish. Proceedings of the 11th International Coral Reef Symposium, Ft. Lauderdale, Florida, July 2008: 554-558.

Heenan, A., S.D. Simpson, M.G. Meekan, S.D. Healy and V.A. Braithwaite, 2009. Restoring depleted coral-reef fish populations through recruitment enhancement: a proof of concept. Journal of Fish Biology, 75: 1857-1867.

Herler, J, S. Koblmueller and C. Sturmbauer, 2009. Phylogenetic relationships of coral-associated gobies (Teleostei, Gobiidae) from the Red Sea based on mitochondrial DNA data. Marine Biology, 156: 725-739.

Hoey, A.S. and D.R. Bellwood, 2009. Limited functional redundancy in a high diversity system: single species dominates key ecological process on coral reefs. Ecosystems, doi: 10.1007/s10021-009-9291-z

Hoey, A.S. and D.R. Bellwood, 2009. Among-habitat variation in herbivory on Sargassum spp. on a mid-shelf reef in the northern Great Barrier Reef. Marine Biology, doi 10.1007/s00227-009-1309-8

Holmes, T., 2009. Processes and mechanisms of predatory interactions on newly settled reef fish. PhD thesis, James Cook University.

Holmes, T.H. and M.I. McCormick, 2009. Influence of prey body characteristics and performance on predator selection. Oecologia, 159: 401-413.

Hyams-Kaphzan, O. and J.J. Lee, 2009. Cytological examination and location of symbionts in "living sands" - Baculogypsina. Journal of Foraminiferal Research, 38: 298-304.

Jones, G.P., G.R. Almany, G.R. Russ, P.F. Sale, R.S. Steneck, M.J.H van Oppen and B.L. Willis, 2009. Larval retention and connectivity among populations of corals and reef fishes: history, advances and challenges. Coral Reefs, 28: 307-325.

Kennedy, K., C. Paxman, A. Dunn, J. O‘Brien and J. Mueller, 2009. Monitoring of organic chemicals in the Great Barrier Reef Marine Park and selected tributaries using time integrated monitoring tools (2008-2009). Draft report by Entox, National Research Centre for Environmental Toxicology.

Komyakova, V., 2009. Habitat characteristics as determinants of the local diversity and structure of coral reef fish communities. Masters (Research) thesis, James Cook University.

Kroon, F.J., P.L. Munday and D.A. Westcott, 2009. Equivalent whole-body concentrations of 11-ketotestosterone in female and male goby Gobiodon erythrospilus, a bidirectional sex-changing fish. Journal of Fish Biology, 75: 685-692.

Lanterbecq, D., G.W. Rouse and I. Eeckhaut, 2009. Evidence for cospeciation events in the host-symbiont system involving crinoids (Echinodermata) and their obligate associates, the myzostomids (Myzostomida, Annelida). Molecular Phylogenetics and Evolution, doi: 10.1016/j.ympev.2009.08.11.

Lowry, J.K and A.A. Myers, 2009. Benthic Amphipoda (Crustacea: Pericarida) of the Great Barrier Reef. Zootaxa, 2260 (Special Issue), 930 pp.

McCormick, M.I., 2009. Indirect effects of heterospecific interactions on progeny size through maternal stress. Oikos, 118: 744-752.

McCormick, M.I., 2009. Behaviourally mediated phenotypic selection in a disturbed coral reef environment. PLoS One, 4: e7096. doi:10.1371/journal.pone.0007096.

McCormick, M.I. and M. & Gagliano, 2009. Carry-over effects - the importance of a good start. Proceedings of the 11th International Coral Reef Symposium, Ft. Lauderdale, Florida, July 2008: 305-310.

Miller, T.L. and T.H. Cribb, 2009. Gynichthys diakidnus n. g., n. sp. (Digenea: Cryptogonimidae) from the grunt Plectorhinchus gibbosus (Lacepede, 1802) (Perciformes: Haemulidae) off the Great Barrier Reef, Australia. Systematic Parasitology, 74: 103-112.

Miller, T.L., A.J. Downie and T.H. Cribb, 2009. Morphological disparity despite genetic similarity; new species of Lobosorchis Miller & Cribb, 2005 (Digenea: Cryptogonimidae) from the Great Barrier Reef and the Maldives. Zootaxa, 1992: 37-52.

Munday, P.L., C.A. Ryen, M.I. McCormick and S.P.W. Walker, 2009. Growth acceleration, behaviour and otolith check marks associated with sex change in the wrasse Halichoeres miniatus. Coral Reefs, 28: 623-634.

Munday, P.L., J.M. Leis, J.M. Lough, C.B. Paris, M.J. Kingsford, M.L. Berumen and J. Lambrechts, 2009. Climate change and coral reef connectivity. Coral Reefs, 28: 379-395.

Munday, P.L., N.E. Crawley and G.E. Nilsson, 2009. Interacting effects of elevated temperature and ocean acidification on the aerobic performance of coral reef fishes. Marine Ecology Progress Series, 388: 235-242.

Nagel, L., 2009. The role of vision in host-finding behaviour of the ectoparasite Gnathia falcipenis (Crustacea; Isopoda). Marine and Freshwater Behaviour and Physiology, 42: 31-42.

Nilsson, G.E., N. Crawley, I.G. Lunde and P.L. Munday, 2009. Elevated temperature reduces the respiratory scope of coral reef fishes. Global Change Biology, 15: 1405-1412.

Owen, C.L., C.G. Messing, G.W. Rouse and M.S. Shivji, 2009. Using a combined approach to explain the morphological and ecological diversity in Phanogenia gracilis Hartlaub, 1893 (Echinodermata: Crinoidea) sensu lato: two species or intraspecific variation? Marine Biology, 156: 1517-1529.

Page, C.A., 2009. Ecology and biology of coral disease on the Great Barrier Reef. PhD thesis, James Cook University.

Poore, G.C.B., 2009. Leipanthura casuarina, a new genus and species of anthurid isopod from Australian coral reefs with out a "five-petalled" tail. ZooKeys, 18:171-180.

Pratchett, M.S., S.K. Wilson, N.A.J. Graham, P.L. Munday, G.P. Jones and N.V.C. Polunin, 2009. Coral bleaching and consequences for motile reef organisms: past, present and uncertain future effects. Chapter 9 in "Coral Bleaching", M.J.H. van Oppen and J.M. Lough (eds.), Ecological Studies 205: 139-158.

Siebeck, U.E., L. Litherland and G.M. Wallis, 2009. Shape learning and discrimination in reef fish. Journal of Experimental Biology, 212: 2113-2119.

Souter, D., 2009. Pesticide monitoring of the inshore Great Barrier Reef by the Reef Water Quality Monitoring Program, 18 August 2009. Data available at: <http://e-atlas.org.au/content/pesticide-monitoring-inshore-great-barrier-reef-reef-water-quality-marine-monitoring-program>.

Sprenger, D., R. Lange, N.K. Michiels and N. Anthes, 2009. The role of body size in early mating behavior in a simultaneous hermaphrodite, Chelidonura sandrana. Behavioral Ecology and Sociobiology, 63: 953-958.

Staples, D.A., 2009. A new species of Rhopalorhynchus (Pycnogonida: Colossendeidae) from Lizard Island, North Queensland, Australia. Zootaxa, 2051: 62-68.

Sussman, M., 2009. Coral diesase pathogens of the Indo-Pacific Ocean. PhD thesis, James Cook University.

Talbot, M.S., 2009. A survey of Mysida from the Lizard Island area, Great Barrier Reef, Australia, subfamily Siriellinae (Crustacea, Mysida, Mysidae). Zootaxa, 2114: 1-49.

Vail, A.L., 2009. Risk assessment by settlement-stage reef fish and non-lethal effects of predators. Honours thesis, James Cook University.

Vinn, O., 2009. The ultrastructure of calcareous cirratulid (Polychaeta, Annelida) tubes. Estonian Journal of Earth Sciences, 58: 153-156.

Waldie, P.A., 2009. Direct and indirect effects of the cleaner wrasse Labroides dimidiatus on coral reef communities. Honours thesis, University of Queensland.

Walker, S.P.W., 2009. Phenotypic plasticity across natural- and sexual-selection gradients in a reef fish. PhD thesis, James Cook University.

Walker, S.P.W. and M.I. McCormick, 2009. Sexual selection explains sex-specific growth plasticity and positive allometry for sexual size dimorphism in a reef fish. Proceedings of the Royal Society B, 276: 3335-3343.

Walker, S.P.W. and M.I. McCormick, 2009. Fish ears are sensitive to sex change. Biology Letters, 5: 73-76.

Ward, R.J., K.D. Clements, J.H. Choat and E.R. Angert, 2009. Cytology of terminally differentiated Epulopiscium mother cells. DNA and Cell Biology, 28: 57-64.

Watson, C., 2009. A new species of Clavisyllis Knox, 1957 (Polychaeta: Syllidae): a genus with the unusual distribution of New Zealand and the Great Barrier Reef, northern Queensland, Australia. The Beagle, Records of the Museums and Art Galleries of the Northern Territory, 25: 79-85.

Wismer, S., A.S. Hoey and D.R. Bellwood, 2009. Cross-shelf benthic community structure on the Great Barrier Reef: relationships between macroalgal cover and herbivore biomass. Marine Ecology Progress Series, 376: 45-54.


LIRS publications in 2008: 78

Anthes, N., H. Schulenburg and N.K. Michiels, 2008. Evolutionary links between reproductive morphology, ecology and mating behaviour in opisthobranch gastropods. Evolution, 62: 900-916.

Bay, L.K., M.J.M. Caleu and R.H. Crozier, 2008. Meta-population structure in a coral reef fish demonstrated by genetic data on patterns of migration, extinction and re-colonisation. BMC Evolutionary Biology, 8: 248-264.

Bellwood, D.R. and C.J. Fulton, 2008. Sediment-mediated suppression of herbivory on coral reefs: decreasing resilience to rising sea levels and climate change? Limnology and Oceanography, 53: 2695-2701.

Benavides-Serrato, M. and T.D. O'Hara, 2008. A new species in the Ophiocoma erinaceus complex from the South-west Pacific Ocean (Echinodermata: Ophiuroidea: Ophiocomidae). Memoirs of Museum Victoria, 65: 51-56.

Berumen, M.L. and M.S. Pratchett, 2008. Trade-offs associated with dietary specialization in corallivorous butterflyfishes. Behaviour, Ecology and Sociobiology, 62: 989-994.

Birrell, C.L., L.J. McCook, B.L. Willis and L. Harrington, 2008. Chemical effects of macroalgae on larval settlement of the broadcast spawning coral Acropora millepora. Marine Ecology Progress Series, 362: 129-137.

Bray, R.A. and T.H. Cribb, 2008. Stephanostomum spp. (Digenea: Acanthocolpidae) from scombrids and carangids (Perciformes) from the Great Barrier Reef, with the description of two new species. Revisita Mexicana de Bidiversidad, 79: 49S-68S.

Bshary, B., A.S. Grutter, A.S.T. Willener and O. Leimar, 2008. Pairs of cooperating cleaner fish provide better service quality than singletons. Nature, 455: 964-967.

Burghardt, I., K. Stemmer and H. Waegele, 2008. Symbiosis between Symbiodinium (Dinophyceae) and various taxa of Nudibranchia (Mollusca: Gastropoda), with analysis of long-term retention. Organisms, Diversity and Evolution, 8: 66-76.

Burghardt, I., M. Schroedl and H. Waegele, 2008. Three new solar-powered species of the genus Phyllodesmium Ehrengerg, 1831 (Mollusca: Nudibranchia: Aeolidioidea) from the tropical Indo-Pacific, with analysis of their photosynthetic activity and notes on biology. Journal of Molluscan Studies, 74: 277-292.

Byrne, M., P. Cisternas and T. O'Hara, 2008. Brooding of pelagic-type larvae in Ophipeza spinosa: reproduction and development in a tropical ophiodermatid brittlestar. Invertebrate Biology, 127: 98-107.

Carter, J.G., T. McDowell and N. Namboodiri, 2008. The identity of Gastrochaena cuneiformis Spengler, 1783, and the evolution of Gastrochaena, Rocellaria and Lamychaena (Mollusca, Bivalvia, Gastrocheanoidea). Journal of Paleontology, 82: 102-117.

Cheney, K.L., 2008. The role of avoidance learning in an aggressive mimcry system. Behavioral Ecology, doi:10.1093/beheco/arn001.

Cheney, K.L., A.S. Grutter and N.J. Marshall, 2008. Facultative mimicry: cues for colour change and colour accuracy in a coral reef fish. Proceedings of the Royal Society B, 275: 117-122.

Cheney, K.L., R. Bshary and A.S. Grutter, 2008. Cleaner fish cause predators to reduce agression towards bystanders at cleaning stations. Behavioural Ecology, 19: 1063-1067.

Coetzee, M.L., N.J. Smit, A.S. Grutter and A.J. Davies, 2008. A new gnathiid (Crustacea: Isopoda) parasitizing two species of requiem sharks from Lizard Island, Great Barrier Reef, Australia. Journal of Parasitology, 94: 608-615.

De Sloover, J.R. and A.-L. Jacquemart, 2008. Nymph Island (Great Barrier Reef, Qld., Australia): Flora and vegetation of a low wooded island. Scripta Botanica Belgica, 43: 1-88.

DeBusk, B.C., M. Slattery, J.-S. Ki, J.-S. Lee, R. Aparachio-Fabre and D. Schlenk, 2008. Species differences and effects of soft coral extracts from Sinularia maximus on the expression of cytochrome P4501A and 2N in
butterflyfishes (Chaetodon spp.). Fish Physiology and Biochemistry, 34: 483-492.

Dornelas, M. and S.R. Connolly, 2008. Multiple modes in a coral species abundance distribution. Ecology Letters, 11: 1008-1016.

Eckes, M.J., U.E. Siebeck, S. Dove and A.S. Grutter, 2008. Ultraviolet sunscreens in reef fish mucus. Marine Ecology Progress Series, 353: 201-211.

Evertsen, J., 2008. Solar powered phycozoans. PhD thesis, Norwegian University of Science and Technology.

Fogelman, R.M and A.S. Grutter, 2008. Mancae of the parasitic cymothoid isopod, Anilocra apogonae: early life history, host specificity, and the effect on growth and survival of preferred young cardinal fishes. Coral Reefs, 27: 685-693.

Fowler, A.M., J.M. Leis and I.M. Suthers, 2008. Onshore-offshore distribution and abundance of tuna larvae (Pisces: Scombridae: Thunnini) in near-reef waters of the Coral Sea. Fisheries Bulletin, 106: 405-416.

Gagliano, M., 2008. On the spot: the absence of predators reveals eyespot plasticity in a marine fish. Behavioral Ecology, 19:733-739.

Gagliano, M., M. Depczynski, S.D. Simpson and J.A.Y. Moore, 2008. Dispersal without errors: symmetrical ears tune into the right frequency for survival. Proceedings of the Royal Society B, 275: 527-534.

Gershwin, L.-A. and W. Zeidler, 2008. Two new jellyfishes (Cnidaria: Scyphozoa) from tropical Australian waters. Zootaxa, 1764: 41-52.

Giere, O., B. Ebbe and C. Erseus, 2008. Questa (Annelida, Polychaeta, Orbiniidae) from Pacific regions - new species and reassignment of the genus Periquesta. Organisms, Diversity and Evolution, 7: 304-319

Gregson, M.A., M.S. Pratchett, M.L. Berumen and B.A. Goodman, 2008. Relationships between butterflyfish (Chaetodontidae) feeding rates and coral consumption on the Great Barrier Reef. Coral Reefs, 27: 583-591.

Gruber, D.F., H.-T. Kao, S. Janoschka, J. Tsai and V.A. Pieribone, 2008. Patterns of fluorescent protein expression in scerlactinian corals. Biological Bulletin, 215: 143-154.

Grutter, A.S., 2008. Interactions between gnathiid isopods, cleaner fish and other fishes on Lizard Island, Great Barrier Reef. Journal of Fish Biology, 73: 2094-2109.

Grutter, A.S., J.L. Pickering, H. McCallum and M.I. McCormick, 2008. Impact of micropredatory gnathiid isopods on young coral reef fishes. Coral Reefs, 27: 655-661.

Gunter, N.L and R.D. Adlard, 2008. Bivalvulidan (Myxozoa: Myxosporae) parasites of damselfishes with description of twelve novel species from Australia's Great Barrier Reef. Parasitology, 135: 1165-1178.

Harold, A.S., R. Winterbottom, P.L. Munday and R.W. Chapman, 2008. Phylogenetic relationships of Indo-Pacific coral gobies of the genus Gobiodon (Teleostei: Gobiidae), based on morphological and molecular data. Bulletin of Marine Science, 82: 119-136.

Herve, P., R. Derelle, P. Lopez, K. Pick, C. Borchiellini, N. Boury-Esnault, J. Van Vacelet, E. Renard, E. Houliston, E. Queinnec, C. Da Silva, P. Wincker, H. Le Guyader, S. Leys, D.J. Jackson, et al., 2008. Phylogenomics revives traditional views on deep animal relationships. Current Biology, 19: 1-7.

Hoey, A.S. and D.R. Bellwood, 2008. Cross-shelf variation in the role of parrotfishes on the Great Barrier Reef. Coral Reefs, 27: 37-47.

Horne, J.B., L. van Herwerden, J.H. Choat and D.R. Robertson, 2008. High population connectivity across the Indo-Pacific: congruent lack of phylogeographic structure in three reef fish congeners. Molecular Phylogenetics and Evolution, 49: 629-638.

Huelsken, T., 2008. Phylogenetic relationship and species identification within the Natcidae Guilding, 1834 (Gastropoda: Caenogastropoda). PhD thesis, Ruhr-Universitaet Bochum.

Johansen, J.L., D.R. Bellwood and C.J. Fulton, 2008. Coral reef fishes exploit flow refuges in high-flow habitats. Marine Ecology Progress Series, 360: 219-226.

Jones, C.M. and A.S. Grutter, 2008. Reef-based micropredators reduce the growth of post-settlement damselfish in captivity. Coral Reefs, 27: 677-684.

Jones, C.M., T.L. Miller, A.S. Grutter and T.H. Cribb, 2008. Natatory-stage cymothoid isopods: description, molecular identification and evolution of attachment. International Journal for Parasitology, 38: 477-491.

Kleinlogel, S. and A.G. White, 2008. The secret world of shrimps: polarisation vision at its best. PLoS ONE, 3: e2190. doi:10.1371/journal.pone.0002190

Konow, N., D.R. Bellwood, P.C. Wainwright and A.M. Kerr, 2008. Evolution of novel jaw points promote trophic diversity in coral reef fishes. Biological Journal of the Linnean Society, 93: 545-555.

Lachlan, R.B., 2008. Additional records of hawk moths and butterflies (Lepidoptera) from Lizard Island, northern Queensland. Australian Entomologist, 35:19-20.

Leck, C. and E.K. Biggs, 2008. Comparison of sources and nature of the tropical aerosol with the summer high Arctic aerosol. Tellus, 60B: 118–126.

Littman, R.A., M.J.H. van Oppen and B.L. Willis, 2008. Methods of sampling free-living Symbiodinium (zooxanthellae) and their distribution and abundance at Lizard Island (Great Barrier Reef). Journal of Experimental Marine Biology and Ecology, 364: 48-53.

Lowry, J.K. and B.A.R. Azman, 2008. A new genus and species of cyproideid amphipod associated with unstalked crinoids on the Great Barrier Reef, Australia. Zootaxa, 1760: 59-68.

Madin, J.S., M.J. O'Donnell and S.R. Connolly, 2008. Climate-mediated mechanical changes to post-disturbance coral assemblages. Biology Letters, 4: 490-493.

Mendell, J.E., K.D. Clements, J.H. Choat and E.R. Angert, 2008. Extreme polyploidy in a large bacterium. Proceedings of the National Academy of Sciences, 105: 6730-6734.

Michiels, N.K., N. Anthes, N.S. Hart, J. Herler, A.J. Meixner, F. Schleifenbaum, G. Schulte, U.E. Siebeck, D. Sprenger and M.F. Wucherer, 2008. Red fluorescence in reef fish; a novel signalling mechanism? BMC Ecology, 8: 16-29.

Miller, T.L. and T.H. Cribb, 2008. Eight new species of Siphoderina Manter, 1934 (Digenea, Cryptogonimidae) infecting Lutjanidae and Haemulidae (Perciformes) off Australia. Acta Parasitologica, 53: 344-364.

Nagel, L., R. Montgomerie and S.C. Lougheed, 2008. Evolutionary divergence in common marine ectoparasites Gnathia spp. (Isopoda: Gnathiidae) on the Great Barrier Reef: phylogeography, morphology and behaviour. Biological Journal of the Linnean Society, 94: 569-587.

Nilsson, G.E. and S. Ostlund-Nilsson, 2008. Does size matter for hypoxia tolerance in fish? Biological Reviews, 83: 173-189.

Page, C.A. and B.L. Willis, 2008. Epidemiology of skeletal eroding band on the Great Barrier Reef and the role of injury in the initiation of this widespread coral disease. Coral Reefs, 27: 257-272.

Pankhurst, N., Q. Fitzgibbon, P. Pankhurst and H. King, 2008. Density effects on reproduction in natural populations of the staghorn damsel, Amblyglyphidodon curacao. Cybium, 32: 297-299.

Pankhurst, N.W., Q.P. Fitzgibbon, P.M. Pankhurst and H.R. King, 2008. Habitat-related variation in reproductive endocrine condition in the coral reef damselfish Acanthochromis polyacanthus. General and Comparative Endocrinology, 155: 386-397.

Patten, N.L., 2008. Viruses in coral reef ecosystems: implications for nutrient cycling and coral health. PhD thesis, Southern Cross University.

Patten, N.L., P.L. Harrison and J.G. Mitchell, 2008. Prevalence of virus-like particles within a staghorn scleractinian coral (Acropora muricata) from the Great Barrier Reef. Coral Reefs, 27: 569-580.

Penfold, R., A.S. Grutter, A.M. Kuris, M.I. McCormick and C.M. Jones, 2008. Interactions between juvenile marine fish and gnathiid isopods: predation versus micropredation. Marine Ecology Progress Series, 357: 111-119.

Plaisance, L., V. Rousset, S. Morand and D.T.J. Littlewood, 2008. Colonization of Pacific islands by parasites of low dispersal ability: phylogeography of two monogenean species parasitizing butterflyfishes in the South Pacific Ocean. Journal of Biogeography, 35: 76-87.

Pratchett, M.S. and M.L. Berumen, 2008. Interspecific variation in distributions and diets of coral reef butterflyfishes (Teleostei: Chaetodontidae). Journal of Fish Biology, 73: 1730-1747.

Pratchett, M.S., M.L. Berumen, M.J. Marnane, J.V. Eagle and D.J. Pratchett, 2008. Habitat associations of juvenile versus adult butterflyfishes. Coral Reefs, 27: 541-551.

Pratchett, M.S., P.L. Munday, S.K. Wilson, N.A.J Graham, J.E. Cinner, D.R. Bellwood, G.P Jones, N.V.C. Polunin and T.R. McClanahan, 2008. Effects of climate-induced coral bleaching on coral-reef fishes - ecological and economic consequences. Ocenography and Marine Biology: an Annual Review, 46: 251-296.

Putz, A., N.K. Michiels and N. Anthes, 2008. Mating behaviour of the sperm-trading sea slug Chelidonura hirundinina: repeated sex role alternation balances reciprocity. Ethology, 114: 85-94.

Rice, A.N., W.J. Cooper and M.W. Westneat, 2008. Diversification of coordination patterns during feeding behaviour in cheiline wrasses. Biological Journal of the Linnean Society, 93: 289-308.

Siebeck, U.E., G.M. Wallis and L. Litherland, 2008. Colour vision in coral reef fish. Journal of Experimental Biology, 211: 354-360.

Simpson, S., A. Jeffs, J. Montgomery, R. McCauley and M. Meekan, 2008. Nocturnal relocation of adult and juvenile coral reef fishes in response to reef noise. Coral Reefs, 27: 97-104.

Simpson, S.D., M.G. Meekan, A. Jeffs, J.C. Montogmery and R.D. McCauley, 2008. Settlement-stage coral reef fish prefer the higher-frequency invertebrate-generated audible component of reef noise. Animal Behaviour, 75: 1861-1868.

Smith, L.L., J.L. Fessler, M.E. Alfaro, J.T. Streelman and M.W. Westneat, 2008. Phylogenetic relationships and the evolution of regulatory gene sequences in the parrotfishes. Molecular Phylogenetics and Evolution, 49: 136-152.

Sprenger, D., J. Faber, N.K. Michiels and N. Anthes, 2008. Natural female mating rate maximises hatchling size in a marine invertebrate. Journal of Animal Ecology, 77: 696-701.

Sprenger, D., N. Anthes and N.K. Michiels, 2008. Multiple mating affects offspring size in the opisthobranch Chelidonura sandrana. Marine Biology, 153(5): 891-897.

Tribollet, A., 2008. Dissolution of dead corals by euendolithic microorganisms across the northern Great Barrier Reef (Australia). Microbial Ecology, 55: 569-580.

Trip, EL., J.H. Choat, D.T. Wilson and D.R. Robertson, 2008. Inter-oceanic analysis of demographic variation on a widely distributed Indo-Pacific coral reef fish. Marine Ecology Progress Series, 373: 97-109.

Vinn, O., H.A. Ten Hove and H. Mutvei, 2008. On the tube ultrastructure and origin of calcification in sabellids (Annelida, Polychaeta). Palaeontology, 51: 295-301.

Wakeford, M., T. Done and C. Johnson, 2008. Decadal trends in coral community and evidence of changed disturbance regime. Coral Reefs, 27: 1-13.

Wong, M.Y.L., P.L. Munday, P.M. Buston and G.P. Jones, 2008. Fasting or feasting in a fish social hierarchy. Current Biology, 18: R372-R373.

Wong, M.Y.L., P.L. Munday, P.M. Buston and G.P. Jones, 2008. Monogamy when there is potential for polygyny: tests of multiple hypotheses in a group-living fish. Behavioural Ecology, 19: 353-361.

Wright, K.J., D.M. Higgs, A.J. Belanger and J.M. Leis, 2008. Auditory and olfactory abilities of larvae of the Indo-Pacific coral trout Plectropomus leopardus (Lacepede) at settlement. Journal of Fish Biology, 72: 2543-2556.

Yerman, M.N. and T. Krapp-Schickel, 2008. A new genus and two new species of Saurodocus (Crustacea: Amphipoda: Melitidae) from Lizard Island, Queensland, Australia. Zootaxa, 1820: 60-66.


LIRS publications in 2007: 74

Affeld, S., H. Waegele, C. Avila, S. Kehraus and G.M. Koenig (2007). Distribution of homarine in some Opisthobranchia (Gastropoda, Mollusca). Bonner zoologische Beitraege, 55: 181-190.

Allen, J. and R. Podolsky (2007). Uncommon diversity in developmental mode and larval form in the genus Macrophiothrix (Echinodermata: Ophiuroidea). Marine Biology, 151: 85-97.

Almany, G.R., LF. Peacock, C. Syms, M.I. McCormick and G.P. Jones (2007). Predators target rare prey in coral reef fish assemblages. Oecologia, 152: 751-761.

Anthes, N. and N.K. Michiels (2007). Reproductive morphology, mating behaviour, and spawning ecology of cephalaspid sea slugs (Aglajdae and Gastropteridae). Invertebrate Biology, 126: 335-365.

Anthes, N. and N.K. Michiels (2007). Precopulatory stabbing, hypodermic injections and unilateral copulations in a hermaphroditic sea slug. Biology Letters, 3: 121-124.

Arvedlund, M. P.L. Munday and A. Takemura (2007). The morphology and ultrastructure of the peripheral olfactory organ in newly metamorphosed coral-dwelling gobies, Paragobiodon xanthosomus Bleeker (Gobiidae, Teleostei). Tissue and Cell, 39: 335-342.

Atkins, B. (2007). Larval fish in the fast lane. Explore, 4: 22-23.

Baldwin, C.C. and J.M. Leis (2007). Rainfordia opercularis, a liopropomin serranid (Teleostei: Serranidae: Epinephelinae): corroborative evidence from settlement-stage larvae. Ichthyological Research, 54: 193-197.

Boyett, H.V., D.G. Bourne and B.L. Willis (2007). Elevated temperature and light enhance progression and spread of black band disease on staghorn corals of the Great Barrier Reef. Marine Biology, 151: 1711-1720.

Bray, R.A. and T.H. Cribb (2007). Monostephanostomum nolani sp. n. and M. krusei Reimer, 1983 (Digenea: Acanthocolpidae) from carangid fishes from coral reef waters off Australia. Folia Parasitologica, 54: 19-26.

Bray, R.A. and T.H. Cribb (2007). Holorchis gigas n. sp. (Digenea: Lepocreadiidae) from the yellow-striped sweet-lips Plectorhinchus chrysotaenia (Perciformes: Haemulidae) from Lizard Island, Great Barrier Reef, with observations on Aephnidiogenes major. Zootaxa, 1517: 63-68.

Bray, R.A., T.H. Cribb, A. Waeschenbach and D.T.J. Littlewood (2007). A new species of Stephanostomum Looss, 1899 (Digenea, Acanthocolpidae) with a bizarre oral sucker: S. adlardi sp. nov. from the common coral trout Plectropomus leopardus (Lacepede, 1802) (Perciformes, Serranidae) from Lizard Island, Great Barrier Reef. Acta Parasitologica, 52: 206-212.

Burger, M.A.A., T.H. Cribb and R.D. Adlard (2007). Patterns of relatedness in the Kudoidae with descriptions of Kudoa chaetodoni n. sp. and K. lethrini n. sp. (Myxosporea: Multivalvulida). Parasitology, 134: 669-681.

Campbell, S.J., L.J. McKenzie, S.P. Kerville and J.S. Bite (2007). Patterns in tropical seagrass photosynthesis in relation to light, depth and habitat. Estuarine, Coastal and Shelf Science, 73: 551-562.

Cheney, K.L. and I.M. Cote (2007). Aggressive mimics profit from a model-signal receiver mutualism.
Proceedings of the Royal Society B, 274: 2087-2091.

Costa, F.O., J.R. deWaard, J. Boutillier, S. Ratnasingham, R.T. Dooh, M. Hajibabaei and P.D. Hebert
(2007). Biological identifications through DNA barcodes: the case of the Crustacea. Canadian Journal of Fisheries and Aquatic Sciences, 64: 272 - 295.

Craig, M.T., J.A. Eble, B.W. Bower and D.R. Robertson (2007). High genetic connectivity across the Indian and Pacific Oceans in the reef fish Myripristis berndti (Holocentridae). Marine Ecology Progress Series, 334: 245-254.

Depczynski, M., C.J. Fulton, M.J. Marnane and D.R. Bellwood (2007). Life history patterns shape energy allocation among fishes on coral reefs. Oecologia, 153: 111-120.

Evertsen, J., I. Burghardt, G. Johnsen and H. Waegele (2007). Retention of functional chloroplasts in some saccoglossans from the Indo-Pacific and Mediterranean. Marine Biology, 151: 2159-2166.

Feary, D.A. (2007). The influence of coral degradation on tropical fish community structure. PhD thesis, James Cook University.

Feary, D.A., G.R. Almany, G.P. Jones and M.I. McCormick (2007). Coral degradation and the structure of tropical reef fish communities. Marine Ecology Progress Series, 333: 243-248.

Feary, D.A., G.R. Almany, M.I. McCormick, and G.P. Jones (2007). Habitat choice, recruitment and the response of coral reef fishes to coral degradation. Oecologia, 153: 727-737.

Fulton, C.J. (2007). Swimming speed performance in coral reef fishes: field validations reveal distinct functional groups. Coral Reefs, 26: 217-228.

Gagliano, M. and M.I. McCormick (2007). Compensating in the wild: is flexible growth the key to early juvenile survival? Oikos, 116: 111-120.

Gagliano, M. and M.I. McCormick (2007). Maternal condition influences phenotypic selection on offspring. Journal of Animal Ecology, 76: 174-182.

Gagliano, M., M.I. McCormick and M.G. Meekan (2007). Survival against the odds: ontogenetic changes in selective pressure mediate growth-mortality trade-offs in a marine fish. Proceedings of the Royal Society B, 274: 1575-1582.

Gagliano, M., M.I. McCormick and M.G. Meekan (2007). Temperature-induced shifts in selective pressure at a critical developmental transition. Oecologia, 152: 219-225.

Gottschalk, S., S. Uthicke and K. Heimann (2007). Benthic diatom community composition in three regions of the Great Barrier Reef, Australia. Coral Reefs, 26: 345-357.

Grzymbowski, Y., K. Stemmer and H. Waegele (2007). On a new Ercolania Trinchese, 1872 (Opisthobranchia, Sacoglossa, Limapontiidae) living within Boergesenia Feldmann, 1950 (Cladophorales), with notes on anatomy, histology and biology. Zootaxa, 1577: 3-16.

Guenther, J. (2007). Natural antifouling defences of tropical sea stars. PhD thesis, James Cook University.

Guenther, J., G. Walker-Smith, A. Waren and R. de Nys (2007). Fouling-resistant surfaces of tropical sea stars. Biofouling, 23: 413-418.

Haendeler, K. and H. Waegele (2007). Preliminary study on molecular phylogeny of Saccoglossa and a compilation of their food organisms. Bonner zoologische Beitraege, 55: 231-254.

Hamdani, E.H. and K.B. Doving (2007). The functional organization of the the fish olfactory system.
Progress in Neurobiology, 82: 80-86.

Huffard, C.L. (2007). Ethogram of Abdopus aculeatus (d'Orbigny, 1834) (Cephalopoda: Octopodidae): can behavioural characters inform octopodid taxonomy and systematics? Journal of Molluscan Studies, 73:185-193.

Jackson, D.J., L. Macis, J. Reitner, B.M. Degnan and G. Woerheide (2007). Sponge paleogenomics reveals an ancient role for carbonic anhydrase in skeletognensis. Science, 316: 1893-1895.

Jawad, L.A. (2007). Comparative morphology of the otolith of the triplefins (Family Tripterygiidae). Journal of Natural History, 41: 901-924.

Johansen, J.L. (2007). Flow refuging by coral reef fishes in wave-swept habitats. MSc thesis, James Cook University.

Johansen, J.L., C.J. Fulton and D.R. Bellwood (2007). Estimating the sustained swimming ability of coral reef fishes. Marine and Freshwater Research, 58: 233-239.

Johansen, J.L., C.J. Fulton and D.R. Bellwood (2007). Avoiding the flow: refuges expand the swimming potential of coral reef fishes. Coral Reefs, 26: 577-583.

Jones, C.M. and A.S. Grutter (2007). Variation in emergence of parasitic and predatory isopods among habitats at Lizard Island, Great Barrier Reef. Marine Biology, 150: 919-927.

Jones, C.M., L. Nagel, G.L. Hughes, T.H. Cribb and A.S. Grutter (2007). Host specificity of two species of Gnathia (Isopoda) determined by DNA sequencing blood meals. International Journal for Parasitology, 37: 927-935.

Kassahn, K.S., M.J. Caley, A.C. Ward, A.R. Connolly, G. Stone and R.H. Crozier (2007). Heterologous microarray experiments used to identify the early gene response to heat stress in a coral reef fish. Molecular Ecology, 16: 1749-1763.

Klanten, O.S., J.H. Choat and L. van Herwerden (2007). Extreme genetic diversity and temporal rather than spatial partitioning in a widely distributed coral reef fish. Marine Biology, 150: 659-670.

Leis, J.M (2007). Behaviour as input for modelling dispersal of fish larvae: behaviour, biogeography, hydrodynamics, ontogeny, physiology and phylogeny meet hydrography. Marine Ecology Progress Series, 347:185-193.

Leis, J.M., K.J. Wright and R.N. Johnson (2007). Behaviour that influences dispersal and connectivity in the small, young larvae of a reef fish. Marine Biology, 153: 103-117.

Maddams, J. (2007). Influence of parental effects on production and larval quality of a serial spawning reef fish. Honours thesis, James Cook University.

McCormick, M.I. and M.G. Meekan (2007). Social facilitation of selective mortality. Ecology, 88: 1562-1570.

Miller, T.L. and T.H Cribb (2007). Phylogenetic relationships of some common Indo-Pacific snappers (Perciformes: Lutjanidae) based on mitochondrial DNA sequences, with comments on the taxonomic position of the Caesioninae. Molecular Phylogenetics and Evolution, 44: 450-460.

Miller, T.L. and T.H. Cribb (2007). Two new cryptogonimid genera Beluesca n. gen. and Chelediadema n. gen. (Digenea: Cryptogonimidae) from tropical Indo-West Pacific Haemulidae (Perciformes). Zootaxa, 1543: 45-60.

Miller, T.L. and T.H. Cribb (2007). Two new cryptogonimid genera (Digenea, Cryptogonimidae) from Lutjanus bohar (Perciformes, Lutjanidae): analyses of ribosomal DNA reveals wide geographic distribution and presence of cryptic species. Acta Parasitilogica, 52: 104-113.

Miller, T. and T.H. Cribb (2007). Coevolution of Retrovarium n. gen. (Digenea: Cryptogonimidae) in Lutjanidae and Haemulidae (Perciformes) in the Indo-west Pacific. International Journal for Parasitology, 37: 1023-1045.

Miller, T.L. (2007). The Cryptogonimidae Ward, 1917 (Platyhelminthes: Digenea), with emphasis on taxa infecting Indo-west Pacific Lutjanidae and Haemulidae (Perciformes). PhD thesis, University of Queensland.

Munkres, K.P., L.K. Bay, D.R. Jerry, M.I. McCormick and L. van Herwerden, 2007. Development and characterization of microsatellite markers for parentage analyses of the coral reef damselfish (Pomacentrus amboinensis: Pomacentridae). Conservation Genetics, 8: 987-990.

Munoz Cerda, G.I. (2007). Patterns in the infracommunity and component community structures of parasites in Wrasses (Labridae): the importance and some biological characteristics of hosts and parasites. PhD thesis, University of Queensland.

Munoz, G., A.S. Grutter and T.H. Cribb (2007). Structure of the parasite communities of a coral reef fish assemblage (Labridae): testing ecological and phylogenetic host factors. Journal of Parasitology, 93: 17-30.

Murphy, B.F., J.M. Leis and K.D. Kavanagh (2007). Larval development of the ambon damselfish Pomacentrus amboinensis, with a summary of pomacentrid development. Journal of Fish Biology, 71: 569-584.

Murray, A. and G.W. Rouse (2007). Two new species of Terebrasabella (Annelida: Sabellidae: Sabellinae) from Australia. Zootaxa, 1434: 51-68.

Nagel, L. and A.S. Grutter (2007). Host preference and specialisation in Gnathia sp., a common parasitid isopod of coral reef fishes. Journal of Fish Biology, 70: 497-508.

Nilsson, G.E., J.-P.A. Hobbs and S. Ostlund-Nilsson (2007). Tribute to P. L. Lutz: respiratory ecophysiology of coral-reef teleosts. The Journal of Experimental Biology, 210: 1673-1686.

Nilsson, G.E., J.-P.A. Hobbs, S. Ostlund-Nilsson and P.L. Munday (2007). Hypoxia tolerance and air-breathing ability correlate with habitat preference in coral-dwelling fishes. Coral Reefs, 26: 241 - 248.

Nilsson, G.E., S. Ostlund-Nilsson, R. Penfold and A.S. Grutter (2007). From record performance to hypoxia tolerance: respiratory transition in damselfish larvae settling on a coral reef. Proceedings of the Royal Society B, 274: 79-85.

Pears, R.J., J.H. Choat, B.D. Mapstone and G.A. Begg (2007). Reproductive biology of a large, aggregation-spawning serranid, Epinephelus fuscoguttatus (Forsskal): management implications. Journal of Fish Biology, 71: 795-817.

Pearse, V.B. and O. Voigt (2007). Field biology of placozoans (Trichoplax): distribution, diversity, biotic interactions. Integrative and Comparative Biology, 47: 677-692.

Pratchett, M.S. (2007). Dietary selection by coral-feeding butterflyfishes (Chaetodontidae) on the Great Barrier Reef, Australia. The Raffles Bulletin of Zoology, Supplement 14: 171-176.

Pratchett, M.S. (2007). Feeding preferences of Acanthaster planci (Echinodermata: Asteroidea) under controlled conditions of food availabliliy. Pacific Science, 61: 113-120.

Rees, S.A., B.N. Opdyke, P.A. Wilson and T.J. Henstock (2007). Significance of Halimeda bioherms to the global carbonate budget based on a geological sediment budget for the northern Great Barrier reef, Australia. Coral Reefs, 26: 177-188.

Roberts-Thompson, A. and N.J. Bott (2007). Exploiting mimicry: Prosorhynchoides thomasi n. sp. (Digenea: Bucephalidae) from the fang blenny genus Plagiotremus (Bleeker) (Blenniidae) from off Lizard Island on the Great Barrier Reef, Australia. Zootaxa, 1514: 61-64.

Ryen, C.A., 2007. Sex-specific growth dynamics in protogynous hermaphrodites. MSc thesis, James Cook University.

Siebeck, U.E. and N.J. Marshall (2007). Potential ultraviolet vision in pre-settlement larvae and settled reef fish - a comparison across 23 families. Vision Research, 47: 2337-2352.

Thompson, V.J., P.L. Munday and G.P. Jones, (2007). Habitat patch size and mating system as determinants of social group size in coral-dwelling fishes. Coral Reefs, 26: 165-174.

Walker, S.P.W. and C. Ryen (2007). Opportunistic hybridization between two congeneric tropical reef fish. Coral Reefs, 26: 539.

Walker, S.P.W., C.A. Ryen and M.I. McCormick (2007). Rapid larval growth predisposes sex change and sexual size dimorphism in a protogynous hermaphrodite, Parapercis snyderi Jordan & Starks, 1905. Journal of Fish Biology, 71: 1347-1357.

Wong, M.Y.L. (2007). The evolution of animal societies: monogamy, group-living and conflict in a coral-dwelling fish. PhD thesis, James Cook University.

Wong, M.Y.L., P.M. Buston, P.L. Munday and G.P. Jones (2007). The threat of punishment enforces peaceful cooperation and stabilizes queues in a coral-reef fish. Proceedings of the Royal Society B, 274: 1093-1099.


LIRS publications in 2006: 72

Anthes, N. (2006). Mating conflicts and their evolution in simultaneously hermaphroditic sea slugs. PhD thesis, Eberhard Karls Universität Tübingen, Germany.

Anthes, N., A. Putz and N.K. Michiels (2006). Hermaphrodite sex role preferences: the role of partner body size, mating history and female fitness in the sea slug Chelidonura sandrana. Behavioural Ecology and Sociobiology, 60: 359:367.

Arnal, C., O. Verneau and Y. Desdevises (2006). Phylogenetic relationships and evolution of cleaning behaviour in the family Labridae: importance of body colour pattern. Journal of Evolutionary Biology, 19: 755-763.

Bandel, K. (2006). Families of the Cerithioidea and related superfamilies (Palaeo-Caenogastropoda; Mollusca) from the Triassic to the Recent characterized by protoconch morphology – including the description of new taxa. Paläontologie, Stratigraphie, Fazies (14), Freiberger Forschungshefte, C 511: 59–138.

Barnett, A., D.R. Bellwood and A.S. Hoey (2006). Trophic ecomorphology of cardinalfish. Marine Ecology Progress Series, 322: 249-257.

Bay, L.K., K. Büchler, M. Gagliano and M.J. Caley (2006). Intraspecific variation in the pelagic larval duration of tropical reef fishes. Journal of Fish Biology, 68: 1206-1214.

Bay, L.K., R.H. Crozier and M.J. Caley (2006). The relationship between population genetic structure and pelagic larval duration in coral reef fishes on the Great Barrier Reef. Marine Biology, DOI 10.1007/s00227-006-0276-6.

Becker, J.H.A. (2006). Interactions between cleaner shrimp and their client fishes on coral reefs.
PhD thesis, University of Queensland.

Bellwood, D.R., P.C. Wainwright, C.J. Fulton and A.S. Hoey (2006). Functional versatility supports coral reef biodiversity. Proceedings of the Royal Society B, 273: 101-107.

Berumen, M.L. (2006). Influence of resource availability on life-history traits in coral-feeding butterflyfishes (Pisces: Chaetodontidae). PhD thesis, James Cook University, Australia.

Berumen, M.L. and M.S. Pratchett (2006). Effects of resource availability on the competitive behaviour of butterflyfishes. Proceedings of the 10th International Coral Reef Symposium, 644-650.

Bott, N.J. (2006). Bivalves and the Bucephalidae: a parasitic system on the Great Barrier Reef.
PhD thesis, University of Queensland.

Boyett, H.V. (2006). The ecology and microbiology of black band disease and brown band syndrome on the Great Barrier Reef. MSc thesis, James Cook University.

Bshary, R. and A.S. Grutter (2006). Image scoring and cooperation in a cleaner fish mutualism. Nature, 441: 977-978.

Burghardt, I. (2006). Biologie, Diversitaet und Evolution "solarbetriebener" Nudibranchia (Mollusca: Gastropoda) und ihrer Symbiose mit Zooxanthellen. PhD thesis, Ruhr-Universitaet Bochum, Germany.

Burghardt, I. and H. Waegele (2006). Interspecific differences in the efficiency and photosynthetic characteristics of the symbiosis of "solarpowered" Nudibranchia (Mollusca: Gastropoda). In: Contemporary studies into the systematics and evolution of opisthobranch molluscs, (Eds. G. Brodie, S. Fahey and F.E. Wells), Records of the Western Australian Museum, Supplement 69: 1-10.

Chambers, C.B. and T.H. Cribb (2006). Phylogeny, evolution and biogeography of the Quadrifoliovariinae Yamaguti, 1965 (Digenea: Lecithasteridae). Systematic Parasitology, 63: 61-82.

Choat, J.H., C.R. Davies, J.L. Ackerman and B.D. Mapstone (2006). Age structure and growth in a large teleost, Cheilinus undulatus, with a review of size distribution in labrid fishes. Marine Ecology Progress Series, 318: 237-246.

Coetzee, M.L. (2006). The taxonomy and phylogeny of three gnathiid isopod species parasitising elasmobranchs from the Great Barrier Reef, Australia. M.Sc. Thesis, University of Johannesburg, South Africa.

Cronin, T.W., R.L. Caldwell and J. Marshall (2006). Learning in stomatopod crustaceans. International Journal of Comparative Psychology, 19: 297-317.

Depczynski, M. (2006). Small cryptic fishes on coral reefs: a new perspective on reef fish ecology and life histories. PhD thesis, James Cook University.

Depczynski, M and D.R. Bellwood (2006). Extremes, plasticity, and invariance in vertebrate life history traits: insights from coral reef fishes. Ecology, 87: 3119-3127.

Dornelas, M. (2006). Coral assemblages and neutral theory. PhD thesis, James Cook University.

Doving, K.B., O.B. Stabell, S. Östlund-Nilsson and R. Fisher (2006). Site fidelity and homing in tropical coral reef cardinalfish: are they using olfactory cues? Chemical Senses, 31: 265-272.

Fraser, T.H. and G.R. Allen (2006). A new species of Neamia (Perciformes: Apogonidae) from the West Pacific Ocean. Memoirs of Museum Victoria, 63: 1-5.

Gagliano, M. (2006). The role of early life history traits on the survival of a coral reef fish. PhD thesis, James Cook University.

Gagliano, M., S. Kowalewsky and M.I. McCormick (2006). An alternative method for the preservation of tropical fish larvae. Journal of Fish Biology, 68: 634 - 639.

Game, E.T. and M.J. Caley (2006). The stability of P in coral reef fishes. Evolution, 60: 814-823.

Grim, N.J. (2006). Food vacuole contents in the ciliate, Balantidium jocularum (Balantididae), a symbiont in the intestine of the surgeonfish, Naso tonganus (Acanthuridae). Journal of Eukaryotic Microbiology, 53: 269-274.

Guerra-Garcia, J. (2006). Caprellidae (Crustacea: Amphipoda) from the Great Barrier Reef and adjacent localities. Records of the Australian Museum, 58: 417-458.

Hoey, A.S. and M.I. McCormick (2006). Effects of subcutaneous fluorescent tags on the growth and survival of a newly settled coral reef fish, Pomacentrus amboinensis (Pomacentridae). Proceedings of the 10th International Coral Reef Symposium, 420-424.

Hoggett, A.K. (2006). A new species of Macrophiothrix (Ophiuroidea: Ophiotrichidae) common in northern Australia. Zootaxa, 1326: 17-24.

Holmes, T.H and M.I. McCormick (2006). Location influences size-selective predation on newly settled reef fish. Marine Ecology Progress Series, 317: 203-209.

Huelsken, T., M. Clemmensen and M. Hollmann (2006). Neverita delessertiana (Recluz in Chenu, 1843): a naticid species (Gastropoda: Caenogastropoda) distinct from Neverita duplicata (Say, 1822) based on molecular data, morphological characters, and geographical distribution. Zootaxa, 1257: 1- 25.

Huffard, C.L. (2006). Locomotion by Abdopus aculeatus (Cephalopoda: octopodidae): walking the line between primary and secondary defences.Journal of Experimental Biology, 209: 3697-3707.

Kassahn, A.S. (2006). A microarray approach to understanding stress in a coral reef fish. PhD thesis, James Cook University.

Keable, S.J. (2006). Taxonomic revision of Natatolana (Crustacea: Isopoda: Cirolanidae). Records of the Australian Museum, 58: 133-244.

Klussmann-Kolb, A. and A. Dinapoli (2006). Systematic position of the pelagic Thecosomata and Gymnosomata within Opisthobranchia (Mollusca, Gastropoda) - revival of the Pteropoda. Journal of Zoological Systematics and Evolutionary Research, 44(2): 118-129.

Lachlan, R.B. (2006). New records of hawk moths and butterflies (Lepidoptera) from Lizard Island, northern Queensland. Australian Entomologist, 33: 133-135.

Lee, J.J. (2006). Algal symbiosis in larger foraminifera. Symbiosis, 42: 63-75.

Leis, J.M. (2006). Are larvae of demersal fishes plankton or nekton? Advances in Marine Biology, 51: 57- 141.

Leis, J.M. and R. Fisher (2006). Swimming speed of settlement-stage reef-fish larvae measured in the laboratory and in the field: a comparison of critical speed and in situ speed. Proceedings of the 10th International Coral Reef Symposium, 438-445.

Livett, B.G., D.W. Sandall, D. Keays, J. Down, K.R. Gayler, N. Satkunanathan and Z. Khalil, 2006. Therapeutic applications of conotoxins that target the neuronal nicotinic acetylcholine receptor. Toxicon, 48: 810-829.

Madin, J.S. and S.R. Connolly (2006). Ecological consequences of major hydrodynamic disturbances on coral reefs. Nature, 444: 477-480.

Madin, J.S., K.P. Black and S.R. Connolly (2006). Scaling water motion on coral reefs: from regional to organismal scales. Coral Reefs, 25: 635 - 644.

McCormick, M.I. (2006). Mothers matter: crowding leads to stressed mothers and smaller offspring in marine fish. Ecology, 87: 1104-1109.

McCormick, M.I. (2006). Distress a normal part of life for a damsel. Australasian Science, October 2006: 29-31.

McCormick, M.I. and A.S. Hoey (2006). Biological and physical correlates of settlement and survival for a coral reef fish, Pomacentrus ambioinensis (Pomacentridae). Proceedings of the 10th International Coral Reef Symposium, 425-430.

McCormick, M.I. and T.H. Holmes (2006). Prey experience of predation influences mortality rates at settlement in a coral reef fish, Pomacentrus amboinensis. Journal of Fish Biology, 68: 969-974.

Messing, C.G., D.L. Meyer, U.E. Siebeck, L.S. Jermiin, D.I. Vaney and G.W. Rouse (2006). A modern soft-bottom, shallow-water crinoid fauna (Echinodermata) from the Great Barrier Reef, Australia. Coral Reefs, 25: 164-168.

Miller, T.L. and T.H. Cribb (2006). A new genus and species of cryptogonimid from Lutjanus spp. (Pisces: Lutjanidae) on the Great Barrier Reef and New Caledonia. Journal of Parasitology, 91: 922-924.

Muñoz, G. and T.H. Cribb (2006). Parasite communities and diet of Coris batuensis (Pisces: Labridae) from Lizard Island, Great Barrier Reef. Memoirs of the Queensland Museum, 52: 191-198.

Muñoz, G., A.S. Grutter and T.H. Cribb (2006). Endoparasite communities of five fish species (Labridae: Cheilininae) from Lizard Island: how important is the ecology and phylogeny of the hosts? Parasitology, 132: 363-374.

Nagel, L. and S.C. Lougheed, 2006. A simple molecular technique for identifying marine host fish by sequencing blood-feeding parasites. Journal of Parasitology, 92(3): 665-668.

Nolan, M.J. and T.H. Cribb (2006). Cardicola Short, 1953 and Braya n.gen. (Digenea: Sanguinicolidae) from five families of tropical Indo-Pacific fishes. Zootaxa, 1265: 1-80.

Nolan, M.J. and T.H. Cribb (2006). An exceptionally rich complex of Sanguinicolidae von Graff, 1907 (Platyhelminthes: Trematoda) from Siganidae, Labridae and Mullidae (Teleostei: Perciformes) from the Indo-west Pacific region. Zootaxa, 1218: 3-80.

Page, C. and B. Willis (2006). Distribution, host range and large-scale spatial variability in black band disease prevalence on the Great Barrier Reef, Australia. Diseases of Aquatic Organisms, 69: 41-51.

Pears, R.J., J.H. Choat, B.D. Mapstone and G.A. Begg (2006). Demography of a large grouper, Epinephelus fuscoguttatus, from Australia's Great Barrier Reef: implications for fishery management. Marine Ecology Progress Series, 307: 259-272.

Pennisi, E. (2006). Plant wannabes. Science, 313: 1229.

Rees, S.A., B.N. Opdyke, P.A. Wilson, L.K. Fifield and V. Levchenko (2006). Holocene evolution of the granite based Lizard Island and MacGillivray Reef systems, Northern Great Barrier Reef. Coral Reefs, 25: 555-568.

Robbins, W.D. (2006). Abundance, demography and population structure of the grey reef shark (Carcharinus amblyrhynchos) and the whitetip reef shark (Triaenodon obesus) (Family Carcharhinidae). PhD thesis, James Cook University, Australia.

Robbins, W.D., M. Hisano, S.R. Connolly and J.H. Choat (2006). Ongoing collapse of coral-reef shark populations. Current Biology, 16: 2314-2319.

San Martin, G. and P. Hutchings (2006). Eusyllinae (Polychaeta: Syllidae) from Australia with the description of a new genus and fifteen new species. Records of the Australian Museum, 58: 257-370.

Scardino, A.J. (2006). Biomimetic foulding control. PhD thesis, James Cook University

Smit, N.J., A.S. Grutter, R.D. Adlard and A.J. Davies (2006). Hematozoa of teleosts from Lizard Island, Australia, with some comments on their possible mode of transmission and the description of a new hemogregarine species. Journal of Parasitology, 92: 778-788.

Smykowski, A. (2006). Sexual conflict in a simultaneous hermaphrodite: how to enforce unilateral matings. Diploma thesis, Univerity of Tübingen, Germany.

Syme, A.E. and G.C.B. Poore (2006). Three new ostracod species from coastal Australian waters (Crustacea: Ostracoda: Myodocopa: Cylindroleberididae). Zootaxa, 1305: 51-67.

Taylor, J.D. and E.A. Glover (2006). Lucinidae (Bivalvia) - the most diverse group of chemosymbiotic molluscs. Zoological Journal of the Linnean Society, 148: 421-438.

Wägele, H., I. Burghardt, N. Anthes, J. Evertsen, A. Klussman-Kolb and G. Brodie (2006). Species diversity of opisthobranch molluscs on Lizard Island, Great Barrier Reef, Australia. In: Contemporary studies into the systematics and evolution of opisthobranch molluscs, (Eds. G. Brodie, S. Fahey and F.E. Wells), Records of the Western Australian Museum, Supplement 69: 33-59.

Wilson, S.K., N.A.J. Graham, M.S. Pratchett, G.P. Jones and N.V.C. Polunin (2006). Multiple disturbances and the global degradation of coral reefs: are reef fishes at risk or resilient? Global Change Biology, 12: 2220-2234.

Yokobori, S., A. Kurabayashi, B.A. Neilan, T. Maruyama and E. Hirose, 2006. Multiple origins of the ascidian-Prochloron symbiosis: Molecular phylogeny of photosymbiotic and non-symbiotic colonial ascidians inferred from 18S rDNA sequences. Molecular Phylogenetics and Evolution, 40: 8-19.

Zamzow, J.P. and U.E. Siebeck (2006). Ultraviolet absorbance of the mucus of a tropical damselfish: effects of ontogeny, captivity and disease. Journal of Fish Biology, 69: 1583-1594.


LIRS publications in 2005: 74

Allen, J.D. (2005). Life-history evolution and the costs of small egg size in echinoderms. PhD thesis, University of North Carolina at Chapel Hill, USA.

Anthes, N., A. Putz and N. Michiels (2005). Gender trading in a hermaphrodite. Current Biology, 15: R792-R793 + supplemental data.

Anthes, N. and N.K. Michiels (2005). Do 'sperm trading' simultaneous hermaphrodites always trade sperm. Behavioural Ecology, 16: 188-195.

Barnett, A. and D.R. Bellwood (2005). Sexual dimorphism in the buccal cavity of paternal mouthbrooding cardinalfishes (Pisces: Apogonidae). Marine Biology, 148: 205-212.

Bay, L.K. (2005). The population genetic structure of coral reef fishes on the Great Barrier Reef. PhD thesis, James Cook University.

Becker, J.H.A. and A.S. Grutter (2005). Client fish ectoparasite loads and cleaner shrimp Urocaridella sp. C hunger levels affect cleaning behaviour. Animal Behaviour, 70: 991-996.

Berumen, M.L. (2005). The importance of juveniles in modelling growth: butterflyfish at Lizard Island. Environmental Biology of Fishes, 72: 409-413.

Berumen, M.L., M.S. Pratchett and M.I. McCormick (2005). Within-reef differences in diet and body condition. Marine Ecology Progress Series, 287: 217-227.

Bott, N.J. and T.H. Cribb (2005). Prosorhynchoides lamprelli n. sp (Digenea : Bucephalidae) from the brassy trevally, Caranx papuensis (Teleostei: Carangidae), from off Lizard Island on the Great Barrier Reef, Australia. Zootaxa, 1059: 33-38.

Bott, N.J. and T.H. Cribb (2005). Grammatorcynicola n. g. (Bucephalidae: Dolichoenterinae) from Grammatorcynus spp. (Scombridae) from the Great Barrier Reef, Australia. Systematic Parasitology, 61: 93-98.

Bott, N.J., J.M. Healy and T.H. Cribb (2005). Patterns of digenean parasitism of bivalves from the Great Barrier Reef and associated waters. Marine and Freshwater Research, 56: 387-394.

Bray, R.A. and T.H. Cribb (2005). Gorgocephalus yaaji n. sp. (Digenea: Gorgocephalidae) from the brassy chub Kyphosus vaigiensis (Perciformes: Kyphosidae) off Lizard Island, norhtern Great Barrier Reef and further records of G. kyphosi. Zootaxa, 1068: 39-46.

Bray, R.A., B.L. Webster, P. Bartoli and D.T.J. Littlewood (2005). Relationships within the Acanthocolpidae Luehe, 1906 and their place among the Digenea. Acta Parasitologica, 50: 281-291.

Bshary, R. and A.S. Grutter (2005). Punishment and partner switching cause cooperative behaviour in a cleaning mutualism. Biology Letters, 1: 396-399.

Buechler, K. (2005). An evaluation of geographic variation in the life history and behaviour of anemonefishes: a common-garden approach. PhD thesis, James Cook University.

Burghardt, I., J. Evertsen, G. Johnsen and H. Waegele (2005). Solar powered sea slugs - mutualistic symbiosis of aeolid Nudibranchia (Mollusca, Gastropoda, Opisthobranchia) with Symbiodinium. Symbiosis, 38: 227-250.

Cheroske, A.G. and T.W. Cronin (2005). Variation in stomatopod (Gonodactylus smithii) color signal design associated with organismal condition and depth. Brain, Behavior and Evolution, 66: 99-113.

Cisternas, P.A. and M. Byrne (2005). Evolution of abbreviated development in the ophiuroid Ophiarachnella gorgonia involves hererochronies and deletions. Canadian Journal of Zoology, 83: 1067-1078.

Crossman, D.J., J.H. Choat and K.D. Clements (2005). Nutritional ecology of nominally herbivorous fishes on coral reefs. Marine Ecology Progress Series, 296: 129-142.

Daly, M. (2005). Wave energy and shoreline response on a fringing reef complex, Lizard Island, Qld, Australia. Honours thesis, University of New South Wales.

Depczynski, M. and D.R. Bellwood (2005). Shortest recorded vertebrate lifespan found in a coral reef fish. Current Biology, 15: R288-R289.

Depczynski, M. and D.R. Bellwood (2005). Wave energy and spatial variability in community structure of small cryptic coral reef fishes. Marine Ecology Progress Series, 303: 283-293.

Fisher, R. (2005). Swimming speeds of larval coral reef fishes: impacts on self-recruitment and dispersal. Marine Ecology Progress Series, 285: 223-232.

Fisher, R., J.M. Leis, D.L. Clark and S.K. Wilson (2005). Critical swimming speeds of late-stage coral reef fish larvae: variation within species, among species and between locations. Marine Biology, 147: 1202-1212.

Ford, E. and P. Hutchings (2005). An analysis of morphological characters of Owenia useful to distinguish species: description of three new species of Owenia (Oweniidae: Polychaeta) from Australian waters. Marine Ecology, 26: 181-196.

Fulton, C.J. (2005). Wave energy and the role of swimming in reef fish ecology. PhD thesis, James Cook University.

Fulton, C.J. and D.R. Bellwood (2005). Wave-induced water motion and the functional implications for coral reef fish assemblages. Limnology and Oceanography, 50: 255-264.

Fulton, C.J., D.R. Bellwood and P.C. Wainwright (2005). Wave energy and swimming performance shape coral reef fish assemblages. Proceedings of the Royal Society B, 272: 827-832.

Garcia-Cuetos, L., X. Pochon and J. Pawlowski (2005). Molecular evidence for host-symbiont specificity in soritid foraminifera. Protist, 156: 399-412.

Grutter, A.S., S. Glover & R. Bshary (2005). Does client size affect cleaner fish choice of client? An empirical test using client fish models. Journal of Fish Biology, 66: 1748-1752.

Hall, K.A. and T.H. Cribb (2005). Revision of Telotrema Ozaki, 1933 (Digenea: Gyliauchenidae Fukui, 1929), including the description of a new species from an acanthurid fish from the Great Barrier Reef, Queensland, Australia. Zootaxa, 1071: 1-18.

Hart, M.W. and R.D. Podolsky (2005). Mitochondrial DNA phylogeny and rates of larval evolution in Macrophiothrix brittlestars. Molecular Phylogenetics and Evolution, 34: 438-447.

Huffard, C. (2005). The behavioral ecology and locomotion of Abdopus aculeatus (d'Orbigny, 1834). PhD thesis, University of California, Berkeley, USA.

Huffard, C.L., F. Boneka and R.J. Full (2005). Underwater bipedal locomotion by octopuses in disguise. Science, 307: 1927.

Jones, C.M. and A.S. Grutter (2005). Parasitic isopods (Gnathia sp.) reduce haematicrit in captive blackeye thicklip (Labridae) on the Great Barrier Reef. Journal of Fish Biology, 66: 860-864.

Kavanagh, K.D. (2005). Boom-or-bust growth in coral reef lagoons. Marine Ecology Progress Series, 286: 307-310.

Konow, N. (2005). Feeding ecomorphology in angelfishes, f. Pomacanthidae: the implications of functional innovations on prey-dislodgement in biting reef fishes. PhD thesis, James Cook University.

Konow, N. and D.R. Bellwood (2005). Prey capture in Pomacanthus semicirculatus (Teleostei, Pomacanthidae): functional implications for intramandibular joints in marine fishes. Journal of Experimental Biology, 208: 1421-1433.

Kroon, F.J., P.L. Munday, D.A. Westcott, J.-P.A. Hobbs and N.R. Liley (2005). Aromatase pathways mediates sex change in each direction. Proceedings of the Royal Society B, 272: 1399-1405.

Lacalli, T.C. (2005). Diversity of form and behaviour among nemertean pilidium larvae. Acta Zoologica, 86: 267-276.

Lee, J.J. and M. Correia (2005). Endosymbiotic diatoms from previously unsampled habitats. Symbiosis, 38: 251-260.

Leis, J.M. and D.L. Clark (2005). Feeding greatly enhances swimming endurance of settlement-stage reef-fish larvae of damselfishes (Pomacentridae). Ichthyological Research, 52: 185-188.

Leis, J.M. and M.M. Lockett (2005). Localization of reef sounds by settlement-stage larvae of coral-reef fishes (Pomacentridae). Bulletin of Marine Science, 76: 715-724.

Lowry, J.K. and P.B. Berents (2005). Algal-tube dwelling amphipods in the genus Cerapus from Australian and Papua New guinea (Crustacea: Amphipoda: Ischyroceridae). Records of the Australian Museum, 57: 153-164.

Lowry, J.K. and R.T. Springthorpe (2005). New and little-known melitid amphipods from Australian waters (Crustacea: Amphipoda: Melitidae). Publication list Reference Records of the Australian Museum, 57: 237-302.

Madin, J.S. (2005). Mechanical limitations of creef corals during hydrodynamic disturbances. Coral Reefs, 24: 630-635.

Marriott, R.J. (2005). Population biology, dynamics and their implications for management of red bass: a large, long-lived fish. MSc(Qual) thesis, James Cook University.

Messmer, V., G.P. Jones, L. van Herwerden and P.L. Munday (2005). Genetic and ecological characterisation of colour dimorphism in a coral reef fish. Environmental Biology of Fishes, 74: 175-183.

Messmer, V., L. van Herwerden, P.L. Munday and G.P. Jones (2005). Phylogeography of colour polymorphism in the coral reef fish Pseudochromis fuscus, from Papua New Guinea and the Great Barrier Reef. Coral Reefs, 24: 392-402.

Motomura, H. and G. Shinohara (2005). Assessment of taxonomic characters of Scorpaenopsis obtusa and S. gibbosa (Scorpaenidae), with first records of S. obtusa from Japan and Australia and comments on the synonymy of S. gibbosa. Cybium, 29: 295-301.

Munoz, G. and T.H. Cribb (2005). Infracommunity structure of parasites of Hemigymnus melapterus (Pisces: Labridae) from Lizard Island, Australia: the importance of habitat and parasite body size. Journal of Parasitology, 91: 38-44.

Negri, A., C. Vollhardt, C. Humphrey, A, Heyward, R. Jones, G. Eaglesham and K. Fabricius (2005). Effects of the herbicide diuron on the early life history stages of coral. Marine Pollution Bulletin, 51: 370-383.

Nolan, M.J. (2005). Sanguinicolidae von Graff, 1907 (Platyhelminthes : Digenea) of Indo-West Pacific fishes. PhD thesis, University of Queensland.

Ostlund-Nilsson, S., L. Curtis, G. Nilsson and A.S. Grutter (2005). Parasitic isopod Anilocra apogonae, a drag for the cardinal fish Cheilodipterus quinquelineatus. Marine Ecology Progress Series, 287: 209-216.

Patterson, H.M. and M.J. Kingsford (2005). Elemental signatures of Acanthochromis polyacanthus otoliths from the Great Barrier Reef have significant temporal, spatial and between-brood variation. Coral Reefs, 24: 360-369.

Patterson, H.M., M.J. Kingsford and M.T. McCulloch (2005). Resolution of the early life history of a reef fish using otolith chemistry. Coral Reefs, 24: 222-229.

Pears, R.J. (2005). Comparative demography and assemblage structure of serranid fishes: implications for conservation and fisheries management. PhD thesis, James Cook University.

Pieribone, V. and D.F. Gruber (2005). Aglow in the dark: the revolutionary science of biofluorescence. Belknap Press of Harvard University Press, Cambridge, Massachusetts and London, England.

Pleijel, F. and G.W. Rouse (2005). Reproductive biology of a new hesionid polychaete from the Great Barrier Reef. Biological Bulletin, 208: 69-76.

Podolsky, R.D. and J.S. McAlister (2005). Developmental plasticity in Macrophiothrix brittlestars: are morphologically convergent larvae also convergently plastic? Biological Bulletin, 209: 127-138.

Pratchett, M. (2005). Dietary overlap among coral-feeding butterflyfishes (Chaetodontidae) at Lizard Island, northern Great Barrier Reef. Marine Biology, 148: 373-382.

Pratchett, M. (2005). Dynamics of an outbreak population of Acanthaster planci at Lizard Island, northern Great Barrier Reef. Coral Reefs, 24: 453-462.

Rees, S. (2005). Coral reefs of the indo-Pacific and changes in global Holocene climate. PhD thesis, University of Southhampton, UK.

San Martin, G. (2005). Exogoninae (Polychaeta: Syllidae) from Australia with the description of a new genus and twenty-two new species. Records of the Australian Museum, 57: 39-152.

Sapolu, T. (2005). Age-based demography and reproductive ontogeny of angelfishes belonging to the family Pomacanthidae. MSc thesis, James Cook University.

Simpson, S.D., M. Meekan, J. Montgomery, R. McCauley and A. Jeffs (2005). Homeward sound. Science, 308: 221.

Tribollet, A. and S. Golubic (2005). Cross-shelf differences in the pattern and pace of bioerosion of experimental carbonate substrates exposed for 3 years on the northern Great Barrier Reef, Australia. Coral Reefs, 24: 422-434.

Vonnemann, V., M. Schroedl, A. Klussmann-Kolb and H. Waegele (2005). Reconstruction of the phylogeny of the Opisthobranchia (Mollusca: Gastropoda) by means of 18S and 28S rRNA gene sequences. Journal of Molluscan Studies, 71: 113-125.

Waller, S. (2005). Ontogenetic colour change and visual ecology of reef fish. PhD thesis, University of Queensland.
Westneat, M.W. and M.E. Alfaro (2005). Phylogenetic relationships and evolutionary history of the reef fish family Labridae. Molecular Phylogenetics and Evolution, 36: 370-390.

Westneat, M.W. and M.E. Alfaro (2005). Phylogenetic relationships and evolutionary history of the reef fish family Labridae. Molecular Phylogenetics and Evolution, 36: 370-390.

Willmott, M.E., K.D. Clements and R.M.G. Wells (2005). The influence of diet and gastrointestinal fermentation on key enzymes of substrate utilization in marine teleost fishes. Journal of Experimental Marine Biology and Ecology, 317: 97-108.

Woerheide, G. (2005). Low variation in partial cytochrome oxidase subunit I (COI) mitochondrial sequences in the coralline demosponge Astrosclera willeyana across the Indo-Pacific. Marine Biology, DOI 10.1007/s00227-005-0134-y.

Wright, K., D.M. Higgs, A.J. Belanger and J.M. Leis (2005). Auditory and olfactory abilities of pre-settlement larvae and post-settlement juveniles of a coral reef damselfish (Pisces: Pomacentridae). Marine Biology, 147: 1425-1434.


LIRS publications in 2004: 69

Abdulla, A (2004). Predator-prey interactions in coral reef fish: the implications of predation risk on the behaviour and growth of prey. PhD thesis, James Cook University.

Ackerman, J. (2004). Geographic variation in size at age of the coral reef fish, Thalassoma lunare (Family Labridae): a contribution to life history theory. PhD thesis, James Cook University.

Almany, G.R. (2004). Priority effects in coral reef fish communities of the Great Barrier Reef. Ecology, 85: 2872-2880.

Almany, G.R. and M.S. Webster (2004). Odd species out as predators reduce diversity of coral-reef fishes. Ecology, 85: 2933-2937.

Angert, E.R. and K.D. Clements (2004). Initiation of intracellular offspring in Epulopiscium. Molecular Microbiology, 51: 827-835.

Ayre, D.J. and T.P Hughes (2004). Climate change, genotypic diversity and gene flow in reef-building corals. Ecology Letters, 7: 273-278.

Barnett, A. (2004). The trophic and reproductive implications of mouthbrooding in apogonid fishes. Honours thesis, James Cook University.

Bay, L.K., J.H. Choat, L. van Herwerden and D.R. Robertson (2004). High genetic diversities and complex genetic structure in an Indo-Pacific tropical reef fish (Chlorurus sordidus): evidence of an unstable evolutionary past? Marine Biology, 144: 757-767.

Becker, J.H. and A.S. Grutter (2004). Cleaner shrimp do clean. Coral Reefs, 23: 515-520.

Bellwood, D.R., L. van Herwerden and N. Konow (2004). Evolution and biogeography of marine angelfishes (Pisces: Pomacanthidae). Molecular Phylogenetics and Evolution, 33: 140-155.

Bellwood, D.R., T.P. Hughes, C. Folke and M. Nystrom (2004). Confronting the coral reef crisis. Nature, 429: 827-833.

Bernardi, G., G. Bucciarelli, D. Costagliola, D.R. Robertson and J.B. Heiser (2004). Evolution of coral reef fish Thalassoma spp. (Labridae). 1. Molecular phylogeny and biogeography. Marine Biology, 144: 369-375.

Beukers-Stewart, B.D and G.P. Jones (2004). The influence of prey abundance on the feeding ecology of two piscivorous species of coral reef fish. Journal of Experimental Marine Biology and Ecology, 299: 155-184.

Choat, J.H., K.D. Clements and W.D. Robbins (2004). The trophic status of herbivorous fishes on coral reefs 2: Food processing modes and trophodynamics. Marine Biology, 145: 445-454.

Cribb, B.W. and I.D. Whittington, 2004. Anterior adhesive areas and adjacent secretions in the parasitic flatworms Decacotyle lymmae and D. tetrakordyle (Monogenea: Monocotylidae) from the gills of stingrays. Invertebrate Biology 123(1): 68-77.

Fisher, R. (2004). Nocturnal vertical distribtuion of late-stage larval coral reef fishes off the leeward side of Lizard Island, Great Barrier Reef, Australia. Bulletin of Marine Science, 75: 439-451.

Fisher, R. and S.K. Wilson (2004). Maximum sustainable swimming speeds of late-stage larvae of nine species of reef fishes. Journal of Experimental Marine Biology and Ecology, 312: 171-186.

Gagliano, M. and M.I. McCormick (2004).Feeding history influences otolith shape in tropical fish. Marine Ecology Progress Series, 278: 291-296.

Gedamke, J. (2004). Minke whale song, spacing, and acoustic communication on the Great Barrier Reef, Australia. PhD thesis, University of California at Santa Cruz.

Grutter, A.S. (2004). Cleaner fish use tactile dancing behavior as a preconflict management strategy. Current Biology, 14: 1080-1083.

Grutter, A.S. and R. Bshary, 2004. Cleaner fish, Labroides dimidiatus, diet preferences for different types of mucus and parasitic gnathiid isopods. Animal Behaviour, 68: 583-588.

Gust, N. (2004). Variation in the population biology of protogynous coral reef fishes over tens of kilometres. Canadian Journal of Fisheries and Aquatic Sciences, 61: 205-218.

Gyuris, E. (2004). An experimental investigation of the effects of human intrusion into breeding colonies of bridled terns Sterna anaethetus in the Great Barrier Reef. Pacific Conservation Biology, 9: 265-72.

Hall, K.A. and T.H. Cribb (2004). Ptychogyliauchen, a new genus of Gyliauchenidae (Platyhelminthes: Digenea) from siganid fishes of the Indo-West Pacific. Invertebrate Systematics, 18: 607-625.

Hall, K.A. and T.H. Cribb (2004). Revision of Affecauda Hall & Chambers, 1999 (Digenea, Gyliauchenidae Fukui, 1929), including description of two new species from fishes of the Indo-West Pacific. Zootaxa, 778: 1-12.

Harrington, L.M. (2004). Ecology of crustose coralline algae; interactions with scleractinian corals and responses to environmental conditions. PhD thesis, James Cook University.

Harrington, L.., K. Fabricius, G. De'ath and A. Negri, 2004. Recognition and selection of settlement substrata determine post-settlement survival in corals. Ecology, 85: 3428-3437.

Hobbs, J.-P.A. and P.L. Munday (2004). Intraspecific competition controls spatial distribution and social organisation of the coral-dwelling goby Gobiodon histrio. Marine Ecology Progress Series, 278: 253-259.

Hobbs, J.-P.A., P.L. Munday and G.P. Jones (2004). Social induction of maturation and sex determination in a coral reef fish. Proceedings of the Royal Society, London, B, 271: 2109-2114.

Hoey, A.S. and M.I. McCormick (2004). Selective predation for low body condition at the larval-juvenile transition of a coral reef fish. Oecologia, 139: 23-29.

Holmes, T.H. (2004). Selectivity of predation on a newly settled tropical reef fish, Pomacentrus amboinensis (Pomacentridae). Honours thesis, James Cook University.

Jones, C.M., A.S. Grutter and T.H. Cribb (2004). Cleaner fish become hosts: a novel form of parasite transmission. Coral Reefs, 23: 521-529.

Kritzer, J.P. (2004). Sex-specific growth and mortality, spawning season, and female maturation of the stripey bass (Lutjanus carponotatus) on the Great Barrier Reef. Fishery Bulletin, 102: 94-107.

Lachlan, R.B. (2004). Description of a second species of Gnathothilibus Wallengren (Lepidoptera: Sphingidae) from Australia. Australian Entomologist, 31: 111-118.

Lee, J.L., B. Burnham and M.E. Cevasco (2004). A new modern soritid foraminifer, Amphisaurus saurensis n. sp., from the Lizard Island Group (Great Barrier Reef, Australia). Micropaleontology, 50: 357-368.

Leis, J.M. (2004). Vertical distribution behaviour and its spatial variation in late-stage larvae of coral-reef fishes during the day. Marine and Freshwater Behaviour and Physiology, 37: 65-88.

MacKenzie, J.B., P.L. Munday, B.L. Willis, D.J. Miller and M.J.H. Van Oppen (2004). Unexpected patterns of genetic structuring among locations but not colour morphs in Acropora nasuta (Cnidaria: Scleractinia). Molecular Ecology, 13: 9-20.

Madin, J.S. (2004). A mechanistic approach to understanding and predicting hydrodynamic disturbance on coral reefs. PhD thesis, James Cook University.

Mapstone, B.D., C.R. Davies, L.R. Little, A.E. Punt, A.D.M. Smith, F. Pantus, D.C. Lou, A.J. Williams, A. Jones, A.M. Ayling, G.R. Russ (2004). The effects of line fishing on the Great Barrier Reef and evaluations of alternative potential management strategies. Techincal Report, CRC Reef Research Centre, 52: 1-205.

Mazel, C.H., T.W. Cronin, R.L. Caldwell and N.J. Marshall (2004). Fluorescent enhancement of signaling in a mantis shrimp. Science, 303: 51.

McCormick, M.I. and A.S. Hoey (2004). Larval growth history determines juvenile growth and survival in a tropical marine fish. Oikos, 106: 225-242.

McCormick, M.I. and S. Smith (2004). Efficacy of passive integrated transponder tags to determine spawning site visitations by tropical fish. Coral Reefs, 23: 570-577.

Munday, P.L. (2004). Competitive coexistence of coral-dwelling fishes: the lottery hypothesis revisited. Ecology, 85: 623-628.

Munday, P.L., A.L. Hodges, J.H. Choat and N. Gust (2004). Sex-specific growth effects in protogynous hermaphrodites. Canadian Journal of Fisheries and Aquatic Sciences, 61: 323-327.

Munday, P.L., L. van Herwerden and C.L. Dudgeon (2004). Evidence for sympatric speciation by host shift in the sea. Current Biology, 14: 1498-1504.

Nilsson, G.E., J.-P. Hobbs, P.L. Munday and S. Ostlund-Nilsson (2004). Coward or braveheart: extreme habitat fidelity through hypoxia tolerance in a coral-dwelling goby. The Journal of Experimental Biology, 207: 33-39.

Nolan, M.J. and T.H. Cribb (2004). Two new blood flukes (Digenea: Sanguinicolidae) from Epinephelinae (Perciformes: Serranidae) of the Pacific Ocean. Parasitology International, 53: 327-335.

Ostlund-Nilsson, S. and G. Nilsson (2004). Breathing with a mouth full of eggs: respiratory consequenses of mouthbrooding in cardinalfish. Proceedings of the Royal Society, London, B, 271: 1015-1022.

Patterson, H.M., M.J. Kingsford and M.T. McCulloch (2004). Elemental signatures of Pomacentrus coelestis otoliths at multiple spatial scales on the Great Barrier Reef, Australia. Marine Ecology Progress Series, 270: 229-239.

Plaisance, L., S. Bouamer and S. Morand (2004). Description and redescription of Haliotrema species (Monogenoidea: Poloyonchoinea: Dactylogyridae) parasitizing butterfly fishes (Teleost: Chaetodontidae) in the Indo-west Pacific Ocean. Parasitology Research, 93: 72-78.

Pochon, X., T.C. LaJeunesse and J. Pawlowski, 2004. Biogeographic partitioning and host specialization among foraminiferan dino?agellate symbionts (Symbiodinium; Dinophyta). Marine Biology, 146: 17-27.

Putz, A. (2004). Sex role preferences and sperm trading in an opisthobranch sea slug. Diploma thesis, University of Muenster, Germany.

Shashar, N., S. Sabah and T.W. Cronin (2004). Transmission of linearly polarized light in seawater: implications for polarization signaling. Journal of Experimental Biology, 207: 3619-3628.

Siebeck, U.E. (2004). Communication in coral reef fish: the role of ultraviolet colour patterns in damselfish terrritorial behaviour. Animal Behaviour, 68: 273-282.

Simpson, S.D., M.G. Meekan, R.D. McCauley and A. Jeffs (2004). Attraction of settlement-stage coral reef fishes to reef noise. Marine Ecology Progress Series, 276: 263-268.

Smith-Vaniz, W.F. (2004). Descriptions of six new species of jawfishes (Opistognathidae: Opistognathus) from Australia. Records of the Australian Museum, 56: 209 - 224.

Syms, C. and G.P. Jones (2004). Habitat structure, disturbance and the composition of sand-dwelling goby assemblages in a coral reef lagoon. Marine Ecology Progress Series, 268: 221-230.

Thacker, C. (2004). Phylogeny and species boundaries in the gobiid genus Gnatholepis (Teleostei: Perciformes). Zoological Journal of the Linnean Society, 142: 573-582.

Tolimieri, N., O. Haine, A. Jeffs, R. McCauley and J. Montgomery (2004). Directional orientation of pomacentrid larvae to ambient reef sound. Coral Reefs, 23: 184-191.

True, J.D. (2004). Massive Porites corals as indicators of environmental change. PhD thesis, James Cook University.

Uthicke, S., D. Welch and J.A.H. Benzie (2004). Slow growth and lack of recovery in overfished holothurians on the Great Barrier Reef: evidence from DNA fingerprints and repeated large-scale surveys. Conservation Biology, 18: 1395-1404.

Uthicke, S., T.D. O'Hara and M. Byrne (2004). Species composition and molecular phylogeny of the Indo-Pacific teatfish (Echinodermata: Holothurioidea) beche-de-mer fishery. Marine and Freshwater Research, 55: 837-848.

Wainwright, P.C., D.R. Bellwood, M.W. Westneat, J.R. Grubich and A.S. Hoey (2004). A functional morphospace for the skull of labrid fishes: patterns of diversity in a complex biomechanical system. Biological Journal of the Linnean Society, 82: 1-25.

Walker, S.P.W. and M.I. McCormick (2004). Otolith-check formation and accelerated gorwth associated with sex change in an annual protogynous tropical fish. Marine Ecology Progress Series, 266: 201-212.

Watson, W. and H.J. Walker Jr. (2004). The world's smallest vertebrate, Schindleria brevipinguis, a new paedomorphic species in the family Schlindleriidae (Perciformes: Gobioidei). Records of the Australian Museum, 56: 139-142.

Whittington, I.D., 2004. The Capsalidae (Monogenea: Monopisthocotylea): a review of diversity, classification and phylogeny with a note about species complexes. Folia Parasitologica, 51: 109-122.

Willis, B.L., C.A. Page and E.A. Dinsdale (2004). Coral disease on the Great Barrier Reef. Chapter 3 in "Coral Health and Disease", E. Rosenberg and Y. Loya (eds.), Springer-Verlag, Berlin.

Wilson, S.K. (2004). Growth, mortality and turnover rates of a small detritivorous fish. Marine Ecology Progress Series, 284: 253-259.

Wolstenholme, J.K. (2004). Temporal reproductive isolation and gametic compatibility are evolutionary mechanisms in the Acropora humilis species group (Cnidaria; Scleractinia). Marine Biology, 144: 567-582.


LIRS publications in 2003: 41

Bellwood, D.R. (2003). Origins and escalation of herbivory in fishes: a functional perspective. Palaeobiology, 29: 71-83.

Bellwood, D.R., A.S. Hoey and J.H. Choat (2003). Limited functional redundancy in high diversity systems: resilience and ecosystem function on coral reefs. Ecology Letters, 6: 281-285.

Birrell, C.L. (2003). Influences of benthic algae on coral settlement and post-settlement survival: implications for the recovery of disturbed and degraded reefs. MSc thesis, James Cook University.

Caley, M.J. and P.L. Munday ( 2003). Growth trades off with habitat specialization. Proceedings of the Royal Society, London, B (Supplement), 2003: S175 - S177.

Caley, M.J. and D. Schluter (2003). Predators favour mimicry in a tropical reef fish. Proceedings of the Royal Society, London, B, 270: 667-672.

Chisholm, J.R.M. (2003). Primary productivity of reef-building crustose coralline algae. Limnology and Oceanography, 48: 1376-1387.

Cronin, T.W., N. Shashar, R.L. Caldwell, J. Marshall, A.G. Cheroske and T.-H. Chiou (2003). Polarization vision and its role in biological signaling. Integrative and Comparative Biology, 43: 549-558.

Cronin, T.W., N. Shashar, R.L. Caldwell, J. Marshall, A.G. Cheroske and T.-H. Chiou (2003). Polarization signals in the marine environment. In: "Polarization Science and Remote Sensing", J.A. Shaw and J.S. Tyo (eds.), Proceedings of SPIE, 5158: 75-82. SPIE, Bellingham, WA, USA.

De Sloover, J.R. (2003). Terrestrial vegetation patterns and plant communitites on Pacific coral cays. Scripta Bot. Belg., 24: 155-167.

Elliott, J.P. and D.R. Bellwood (2003). Alimentary tract morphology and diet in three coral reef fish families. Journal of Fish Biology, 63: 1598-1609.

Grutter, A. (2003). Feeding ecology of the fish ectoparasite Gnathia sp. (Crustacea: Isopoda) from the Great Barrier Reef and its implications for fish cleaning behaviour. Marine Ecology Progress Series, 259: 295-302.

Grutter, A.S. and R. Bshary (2003). Cleaner wrasse prefer client mucus: support for partner control mechanisms in cleaning interactions. Proceedings of the Royal Society, London, B. Supplement, 270: S242-S244.

Grutter, A.S., J.M. Murphy and J.H. Choat (2003). Cleaner fish drives local fish diversity on coral reefs. Current Biology, 13: 64-67.

Hubble, M. (2003). The ecological significance of body size in tropical wrasses. PhD thesis, James Cook University.

Jones, C., A.S. Grutter and T.H. Cribb (2003). Rhipidocotyle labroidei n. sp. (Digenea: Bucephalidae) from Labroides dimidiatus (Valenciennes) (Labridae). Zootaxa, 327: 1-5.

Klanten, S.O. (2003). Molecular phylogeny, temporal patterns of lineage diversification and phylogeography of the surgeon fish genus Naso (Acanthuridae). PhD thesis, James Cook University.

Kroon, F.J., P.L. Munday and N.W. Pankhurst (2003). Steroid hormone levels and bi-directional sex change in Gobiodon histrio. Journal of Fish Biology, 62: 153-167.

Lachlan, R.B. (2003). An annotated list of the hawk moths and butterflies (Lepidoptera) of Lizard Island, Queensland. Australian Entomologist, 30: 1-3.

Leis, J.M. (2003). What does larval fish biology tell us about the design and efficacy of marine protected areas? In: J.P. Beumer, A. Grant and D.C. Smith (eds.). "Aquatic Protected Areas: What works best and how do we know?" Proceedings of the World Congress on Aquatic Protected Areas, Cairns. ASFB, North Beach, WA.

Leis, J.M. and B.M. Carson-Ewart (2003). Orientation of pelagic larvae of coral-reef fishes in the ocean. Marine Ecology Progress Series, 252: 239-253.

Leis, J.M., B.M. Carson-Ewart, A.C. Hay and D.H. Cato (2003). Coral-reef sounds enable nocturnal navigation by some reef-fish larvae in some places and at some times. Journal of Fish Biology, 63: 724-737.

Losey, G.S. (2003). Crypsis and communication functions of UV-visible coloration in two coral reef damselfish, Dascyllus aruanus and D. reticulatus. Animal Behaviour, 66: 299-307.

Marshall, N.J. and M. Vorobyev (2003). The design of color signals and color vision in fishes. Chapter 10 (pp. 194-222) in "Sensory Processing in Aquatic Environments", S.P. Collin and N.J. Marshall (eds.). Springer-Verlag, New York.

McCormick, M.I. (2003). Consumption of coral propagules after mass spawning enhances larval quality of damselfish through maternal effects. Oecologia, 136: 37-45.

Messmer, V. (2003). Genetic and experimental analysis of colour variation in coral reef fish (family Pseudochromidae). Honours thesis, James Cook University.

Moore, S.W. (2003). Scrambled eggs: mechanical forces as ecological factors in early development. Evolution and Development, 5: 61-66.

Muehlenhardt-Siegel, U. (2003). Shallow-water cumacean crustacea from Australia and Lombok (Indonesia): families Bodotriidae and Leuconidae. Records of the South Australian Museum, 36: 21-57.

Munday, P.L., P.J. Eyre and G.P. Jones (2003). Ecological mechanisms for coexistence of colour polymorphism in a coral-reef fish: an experimental evaluation. Oecologia, 137: 519-526.

Munday, P.L., M. Schubert, J.A. Baggio, G.P. Jones, M.J. Caley and A.S. Grutter (2003). Skin toxins and external parasitism of coral-dwelling gobies. Journal of Fish Biology, 62: 976-981.

Myers, M.R. (2003). Coral reef monitoring for management purposes and the impact of marine protected areas on benthic communities on the Great Barrier Reef. Doctor of Environmental Science and Engineering thesis, University of California Los Angeles.

Nilsson, G.E. and S. Ostlund-Nilsson (2003). Hypoxia in paradise: widespread hypoxia tolerance in coral reef fishes. Proceedings of the Royal Society London Ser. B. (Biology Letters Supplement, published online 10.09.03), 271: S30-S33.

Nilsson, G.E. and S. Ostlund-Nilsson (2003). Hypoxia on coral reefs and hypoxia tolerance in coral reef fish. In: "Fish physiology, toxicology, and water quality: Proceedings of the Seventh International Symposium, Tallinn, Estonia, May 12-15, 2003", G. Rupp and M.D. White (eds.) Ecosystems Research Division, Athens, Georgia, USA.

Olson, P.D., T.H. Cribb, V.V. Tkach, R.A. Bray and D.T.J. Littlewood (2003). Phylogeny and classification of the Digenea (Platyhelminthes: Trematoda). International Journal for Parasitology, 33: 733-755.

Pankhurst, P.M. and N.W. Pankhurst (2003). Plasma steroid levels and follicular development in the female staghorn damselfish Amblyglyphidodon curacao. Fish Physiology and Biochemistry, 28: 357-358.

Patterson, H.M. (2003). Otolith chemsitry, early life history, and potential self-recruitment of coral reef fishes. PhD thesis, James Cook University.

Riegl, B. and A. Antonius (2003). Halofolliculina skeleton eroding band (SEB): a coral disease with fossilization potential? Coral Reefs, 22: 48.

Schubert, M., P.L. Munday, M.J. Caley, G.P. Jones and L.E. Llewellyn. (2003). The toxicity of skin secretions from coral-dwelling gobies and their potential role as a predator deterrent. Environmental Biology of Fishes, 67: 359-367.

Sundberg, P., R. Gibson and U. Olsson (2003). Phylogenetic analysis of a group of palaeonemerteans (Nemertea) including two new species from Queensland and the Great Barrier Reef, Australia. Zoologica Scripta, 32: 279-296.

Wilson, S.K., D.R. Bellwood, J.H. Choat and M.J. Furnas (2003). Detritus in the epilithic algal matrix and its use by coral reef fishes. Oceanography and Marine Biology: an Annual Review, 41: 279-309.

Wolstenholme, J.K. (2003). Species boundaries in scleractinial corals: a case study of the Acropora humilis species group. PhD thesis, James Cook University.

Zeller, D., S.L. Stoute and G.R. Russ (2003). Movements of reef fishes across marine reserve boundaries: effects of manipulating a density gradient. Marine Ecology Progress Series, 254: 269-280.


LIRS publications in 2002: 64

Almany, G.R. (2002). Role of priority effects and habitat complexity in coral-reef fish communities. PhD thesis, Oregon State University, Corvallis, OR, USA.

Bansemer, C., A.S. Grutter and R. Poulin (2002). Geographic variation in the behaviour of the cleaner fish Labroides dimidiatus (Labridae). Ethology, 108: 353-366.

Bellwood, D.R., P.C. Wainwright, C.J. Fulton and A. Hoey (2002). Assembly rules and functional groups at global geographical scales. Functional Ecology, 16: 557-562.

Bray, R.A. and T.H. Cribb (2002). Observations on the phylogeny of Opistadena Linton, 1910 and related genera (Hemiuridae: Opisthadeninae) from Australian and French Polynesian waters. Folia Parasitologica, 49: 279-290.

Bshary, R. and A.S. Grutter (2002). Parasite distribution on client reef fish determines cleaner fish foraging patterns. Marine Ecology Progress Series, 235: 217-222.

Bshary, R. and A.S. Grutter (2002). Experimental evidence that partner choice is a driving force in the payoff distribution among cooperators or mutualists: the cleaner fish case. Ecology Letters, 5: 130-136.

Bshary, R. and A.S. Grutter (2002). Asymmetric cheating opportunities and partner control in a cleaner fish mutualism. Animal Behaviour, 63: 547-555.

Carroll, A.R., G.P. Pierens, G. Fechner, P. de Almeida Leone, A. Ngo, M. Simpson, E. Hyde, J.N.A. Hooper, S.-L. Bostrom, D. Musil (2002). Dysinosin A: a novel inhibitor of Factor VIIa and thrombin from a new genus and species of Australian sponge of the family Dysideidae. Journal of the American Chemical Society, 124: 13340-13341.

Chambers, C.B., 2002. Gastro-intestinal digeneans of acanthurid fishes: diversity and host-parasite interactions. PhD thesis, University of Queensland.

Chen, L.-S. (2002). Post-settlement diet shift of Chlorurus sordidus and Scarus schlegeli (Pisces: Scaridae). Zoological Studies, 41: 47-58.

Choat, J.H. and D.R. Robertson (2002). Age-based studies on coral reef fishes. Chapter 3 in "Coral Reef Fishes" ed. P. Sale, Academic Press.

Choat, J.H., K.D. Clements and W.D. Robbins (2002). The tropic status of herbivorous fishes on coral reefs. Marine Biology, 140: 613-623.

Cronin, T.W. and R.L. Caldwell, 2002. Tuning of photoreceptor function in three mantis shrimp species that inhabit a range of depths. II. Filter pigments. Journal of Comparative Physiology A, 188: 187-197.

Cronin, T.W., R.L. Caldwell and M.V. Erdmann, 2002. Tuning of photoreceptor function in three mantis shrimp species that inhabit a range of depths. I. Visual pigments. Journal of Comparative Physiology A, 188: 179-186.

Dinsdale, E.A. (2002). Abundance of black-band disease on corals from one location on the Great Barrier Reef: a comparison with abundance in the Caribbean region. Proceedings of the 6th International Coral Reef Symposium, 2: 1239-1243.

Erseus, C., M. Kallersjo, M. Ekman and R. Hovmoller (2002). 18S rDNA phylogeny of the Tubificidae (Clitellata) and its constituent taxa: dismissal of the Naididae. Molecular Phylogenetics and Evolution, 22: 414-422.

Ferry-Graham, L.A., P.C. Wainwright, M.W. Westneat and D.R. Bellwood (2002). Mechanisms of benthic prey capture in wrasses (Labridae). Marine Biology, 141: 819-830.

Fisher, R. (2002). The functional capabilities of reef fish larvae: implications for dispersal during the pelagic phase. PhD thesis, James Cook University.

Fisher, R. and D.R. Bellwood (2002). A light trap design for stratum-specific sampling of reef fish larvae. Journal of Experimental Marine Biology and Ecology, 269: 27-37.

Fulton, C.J. and D.R. Bellwood (2002). Patterns of foraging in labrid fishes. Marine Ecology Progress Series, 226: 135-142.

Fulton, C.J. and D.R. Bellwood (2002). Ontogenetic habitat use in labrid fishes: an ecomorphological perspective. Marine Ecology Progress Series, 236: 255-262.

Grutter, A.S. (2002). Cleaning symbioses from the parasites' perspective. Parasitology, 124: S65-S81.

Grutter, A.S. and R.J.G. Lester (2002). Cleaner fish Labroides dimidiatus reduce 'temporary' parasitic corallanid isopods on the coral reef fish Hemigymnus melapterus. Marine Ecology Progress Series, 234: 247-255.

Grutter, A.S., H. McCallum and R.J.G. Lester (2002). Optimising cleaning behaviour: minimising the cost and maximising ectoparasite removal. Marine Ecology Progress Series, 234: 257-264.

Gust, N. (2002). Scarid biomass on the northern Great Barrier Reef: the influence of exposure, depth and substrata. Environmental Biology of Fishes, 64: 353-366.

Gust, N., J.H. Choat and J.L. Ackerman (2002). Demographic plasticity in tropical reef fishes. Marine Biology, 140:1039-1051.

Heyward, A.J., L.D. Smith, M. Rees and S.N. Field (2002). Enhancement of coral recruitment by in situ mass culture of coral larvae. Marine Ecology Progress Series, 230: 113-118.

Hobbs, J.-P. (2002). An experimental evaluation of sexual plasticity in a coral-dwelling goby. Honours thesis, James Cook University.

Hooper, J.N.A., J.A. Kennedy and R.J. Quinn (2002). Biodiversity 'hotspots', patterns of richness and endemism, and taxonomic affinities of tropical Australian sponges (Porifera). Biodiversity and Conservation, 11: 851-885.

Hughes, T.P., A.H. Baird, E.A. Dinsdale, V.J. Harriott, N.A. Moltschaniwskyj, M.S. Pratchett, J.E. Tanner and B.L. Willis (2002). Detecting regional variation using meta-analysis and large-scale sampling: latitudinal patterns in recruitment. Ecology, 83: 436-451.

Hulsey, C.D. and P.C. Wainwright (2002). Projecting mechanics into morphospace: disparity in the jaws of labrid fishes. Proceedings of the Royal Society, London, B. 269: 317-326.

Jones, G.P. and M.I. McCormick (2002). Numerical and energetic processes in the ecology of fish populations on coral reefs. In: Coral reef fishes - dynamics and diversity in a complex ecosystem, P.F. Sale (ed.), chapter 10, pp. 221-238, Academic Press, New York.

Kritzer, J.P. (2002). Stock structure, mortality and growth of the decorated goby, Istigobius decoratus (Gobiidae) at Lizard Island, Great Barrier Reef. Environmental Biology of Fishes, 63: 211-216.

Kritzer, J. (2002). Variation in the population biology of stripey bass Lutjanus carponotatus wihtin and between two island groups on the Great Barrier Reef. Marine Ecology Progress Series, 243:191-207.

Lamprell, K. and J.M. Healy (2002). A review of the Indo-Pacific Lioconcha Moerch (Mollusca: Bivalvia: Verenidae), including a description of four new species from Queensland, New Caledonia and the Philippine Islands. Molluscan Research, 22:101-147.

Larson, H.K. (2002). A new genus of small coral-reef goby (Teleostei:Gobiidae) from the Indo-west Pacific, with discussion of its relationships. The Beagle, Records of the Museums and Art Galleries of the Northern Territory, 18: 63-71.

Leis, J.M. (2002). Pacific coral-reef fishes: the implications of behaviour and ecology of larvae for biodiversity and conservation, and a reassessment of the open population paradigm. Environmental Biology of Fishes, 65: 199-208.

Leis, J.M. and B.M. Carson-Ewart (2002). In situ settlement behaviour of damselfish (Pomacentridae) larvae. Journal of Fish Biology, 61: 325-346.

Leis, J.M., B.M. Carson-Ewart and D.H. Cato (2002). Sound detection in situ by the larvae of a coral-reef damselfish (Pomacentridae). Marine Ecology Progress Series, 232: 259-268.

Leis, J.M., B.M. Carson-Ewart and J. Webley (2002). Settlement behaviour of coral-reef fish larvae at subsurface artificial-reef moorings. Marine and Freshwater Research, 53: 319-327.

Leis, J.M. and M.I. McCormick (2002). The biology, behaviour and ecology of the pelagic, larval stage of coral reef fishes. Chapter 8 (pp. 171-199) in: Coral Reef Fishes, P.J. Sale (ed). Elsevier Science, USA.

Lowry, J.K. and H.E. Stoddart (2002). The Amaryllididae of Australia (Crustacea: Amphipoda: Lysianassoidea). Records of the Australian Museum, 54: 129-214.

Lukoschek, V. and M.I. McCormick (2002). A review of multi-species foraging associations in fishes and their ecological significance. In: Kasim Moosa M, Soemodihardjo S, Nontji A, Soegiarto A, Romimohtarto K, Sukarno, Suharsono (eds). Proceedings of the 9th International Coral Reef Symposium. Indonesian Institute of Sciences & Intl. Society for Reef Studies.

McCormick, M.I., L. Makey and V. Dufour (2002). Comparative study of metamorphosis in tropical reef fishes. Marine Biology, 141: 841-853.

McCormick, M.I. and I.V. Nechaev (2002). Influence of cortisol on developmental rhythms during embryogenesis in a tropical damselfish. Journal of Experimental Zoology, 293: 456-466.

Mohlmann, M.S. and J.E. Randall (2002). Three new species of gobiid fishes of the genus Amblyeleotris from the central and western Pacific. Raffles Bulletin of Zoology, 50: 215-226.

Munday, P.L. (2002). Does habitat availability determine geographical-scale abundances of coral-dwelling fishes? Coral Reefs, 21: 105-116.

Munday, P.L. (2002). Bi-directional sex change: testing the growth-rate advantage model. Behavioural Ecology and Sociobiology, 52: 247-254.

Newman, L.J. (2002). A new euryleptid flatworm (Platyhelminthes: Polycladida) associated with a colonial ascidian from the Great Barrier Reef. Memoirs of the Queensland Museum, 48: 169-172.

Newman, L. and L.R.G. Cannon (2002). The genus Cycloporus (Platyhelminthes: Polycladida) from Australasian waters. Raffles Bulletin of Zoology, 50: 287-299.

Newman, L.J. (2002). A new euryleptid flatworm (Platyhelminthes: Polycladida) associated with a colonial ascidian from the Great Barrier Reef. Memoirs of the Queensland Museum, 48: 169-172.

Newman, L.J. and P. Schupp, 2002. A new species of pseudocerotid flatworm (Platyhelminthes, Polycladida) from the Indo-Pacific. Micronesica, 34: 177-184.

O'Dor, R.K., S. Adamo, J.P. Aitken, Y. Andrade, J. Finn, R.T. Hanlon and G.D. Jackson (2002). Currents as environmental constraints on the behavior, energetics and distribution of squid and cuttlefish. Bulletin of Marine Science, 71: 601-617.

Siebeck, U.E. (2002). UV vision and visual ecology of reef fish. PhD thesis, University of Queensland.

Streelman, J.T., M. Alfaro, M.W. Westneat, D.R. Bellwood and S.A. Karl (2002). Evolutionary history of the parrotfishes: biogeography, ecomorphology and comparative diversity. Evolution, 56: 961-971.

Tebbich, S., R. Bshary and A.S. Grutter (2002). Cleaner fish Labroides dimidiatus recognise familiar clients. Animal Cognition, 5: 139-145.

Tribollet, A., G. Decherf, P.A. Hutchings and M. Peyrot-Clausade (2002). Large-scale spatial variability in biorerosion of experimental coral substrates on the Great Barrier Reef (Australia): importance of microborers. Coral Reefs, 21: 424-432.

Wainwright, P.C., D.R. Bellwood and M.W. Westneat (2002). Ecomorphology of locomotion in labrid fishes. Environmental Biology of Fishes, 65: 47-62.

Webster, M.S. (2002). Role of predators in the early post-settlement demography of coral-reef fishes. Oecologia, 131: 52-60.

Webster, M.S. and G.R. Almany (2002). Positive indirect effects in a coral reef fish community. Ecology Letters, 5: 549-557.

Wilson, S. (2002). Nutritional value of detritus and algae in blenny territories on the Great Barrier Reef. Journal of Experimental Marine Biology and Ecology, 271: 155-169.

Woerheide, G., J.N.A. Hooper and B.M. Degnan (2002). Phylogeography of western Pacific Leucetta 'chagoensis' (Porifera: Calcarea) from ribosomal DNA sequences: implications for population history and conservation of the Great Barrier Reef World Heritage Area (Australia). Molecular Ecology, 11: 1753-1768.

Zamzow, J.P. and G.S. Losey (2002). Ultraviolet radiation absorbance by coral reef fish mucus: photo-protection and visual communication. Environmental Biology of Fishes, 63: 41-47.

Zeller, D.C. (2002). Tidal current orientation of Plectropomus leopardus (Serranidae). Coral Reefs, 21: 183-187.

Zemke-White, W.L., J.H. Choat and K.D. Clements (2002). A re-evaluation of the diel feeding hypothesis for marine herbivorous fishes. Marine Biology, 141: 571-579.


LIRS publications in 2001: 51

Ahyong, S.T., 2001. Revision of the stomatopod Crustacea. Records of the Australian Museum, Supplement 26: 1-326.

Antonius, A. and D. Lipscomb (2001). First protozoan coral-killer identified in the Indo-Pacific. Atoll Research Bulletin, 481-493: 1-21.

Baird, A.H. (2001). The ecology of coral larvae: settlement patterns, habitat selection and the length of the larval phase. PhD thesis, James Cook University.

Bay, L.K., G.P. Jones and M.I. McCormick (2001). Habitat selection and aggression as determinants of spatial segregation among damselfish on a coral reef. Coral Reefs, 20: 289-298.

Bellwood, D.R. and P.C. Wainwright (2001). Locomotion in labrid fishes: implications for habitat use and cross-shelf biogeography on the Great Barrier Reef. Coral Reefs, 20: 139-150.

Bray, R.A. and T.H. Cribb (2001). Weketrema gen. n., a new genus for Weketrema hawaiiense (Yamaguti, 1970) comb. n. (Digenea: Lecithasteridae) recently found in Australian marine fishes. Folia Parasitologica, 48: 109-114.

Bray, S.L. (2001). Geography and the co-variation of life-history traits in the damselfish, Pomacentrus moluccensis. Honours thesis, James Cook University.

Cribb, T. H., R.A. Bray, D.T.J. Littlewood, S. Pichelin and E.A. Herniou (2001). The Digenea. In: Interrelationships of the Platyhelminthes. D.T.J. Littlewood and R. A. Bray. London, Taylor & Francis: 168-185.

Cronin, T.W., R.L. Caldwell and J. Marshall (2001). Tunable colour vision in a mantis shrimp. Nature, 411 (31 May 2001): 547-548.

Crossman, D.J., J.H. Choat, K.D. Clements, T. Hardy and J. McConochie (2001). Detritus as food for grazing fishes on coral reefs. Limnology and Oceanography, 46: 1596-1605.

Eagle, J.V., G.P. Jones and M.I. McCormick (2001). A multi-scale study of the relationships between habitat use and the distribution and abundance patterns of three coral reef angelfishes (Pomacanthidae). Marine Ecology Progress Series, 214: 253-265.

Emslie, M.J. and G.P. Jones (2001). Patterns of embryo mortality in a demersally spawning coral reef fish and the role of predatory fishes. Environmental Biology of Fishes, 60(4): 363-373.

Ferry-Graham, L.A., P.C. Wainwright, M.W. Westneat and D.R. Bellwood (2001). Modulation of prey capture kinematics in the cheeklined wrasse Oxycheilinus digrammus (Teleostei: Labridae). Journal of Experimental Zoology, 290: 88-100.

Fulton, C.J., D.R. Bellwood and P.C. Wainwright (2001). The relationship between swimming ability and habitat use in wrasses. Marine Biology, 139: 25-33.

Gedamke, J., D.P. Costa and A. Dunstan (2001). Localization and visual verification of a complex minke whale vocalization. Journal of the Acoustical Society of America, 109: 3038-3047.

Glover, E.A. and J.D. Taylor (2001). Systematic revision of Australian and Indo-Pacific Lucinidae (Mollusca: Bivalvia): Pillucina, Wallucina and descriptions of two new genera and four new species. Records of the Australian Museum, 53: 263-292.

Glover, E.A. and J.D. Taylor (2001). Systematic revision of Australian and Indo-Pacific Lucinidae (Mollusca: Bivalvia): Pillucina, Wallucina and descriptions of two new genera and four new species. Records of the Australian Museum, 53: 263-292.

Grutter, A.S. (2001). Parasite infection rather than tactile stimulation is the proximate cause of cleaning behaviour in reef fish. Proceedings of the Royal Society London B 268: 1361-1365.

Gust, N., J.H. Choat and M.I. McCormick (2001). Spatial variability in reef fish distribution, abundance, size and biomass: a multi-scale analysis. Marine Ecology Progress Series, 214: 237-251.

Hall, V.R. (2001). The response of Acropora hyacinthus and Montipora tuberculosa to three different types of colony damage: scraping injury, tissue mortality and breakage. Journal of Experimental Marine Biology and Ecology, 264: 209-223.

Hallett, S.L., C. Erseus, P.J. O'Donoghue and R.J.G. Lester (2001). Parasite fauna of Australian Marine oligochaetes. Memoirs of the Queensland Museum, 46(2): 555-576.

Hayward, P.J. (2001). The identity of two species of cyphonautes larvae (Bryozoa: Cheilostomata) from Lizard Island, Great Barrier Reef, Australia. Journal of the Marine Biological Association of the United Kingdom, 81: 995-999.

Kritzer, J.P. (2001). Patterns of spatial variation in the population biology of a coral reef fish and implications for metapopulation dynamics. PhD thesis, James Cook University.

Kuiter, R.H. (2001). Revision of the Australian seahorses of the genus Hippocampus (Sygnathiformes: Sygnathidae) with descriptions of nine new species. Records of the Australian Museum, 53: 293-340.

Lange, R., M. Bergbauer, U. Szewzyk, and J. Reitner, 2001. Soluble proteins control growth of skeleton crystals in three coralline demosponges. Facies, 45: 195-202.

Lukoschek, V. and M.I. McCormick (2001). Ontogeny of diet changes in a tropical benthic carnivorous fish, Parupeneus barberinus (Mullidae): relationship between foraging behaviour, habitat use, jaw size, and prey selection. Marine Biology, 138: 1099-1113.

Maida, M., P.W. Sammarco, J.C. Coll (2001). Effects of soft corals on scleractinial coral recruitment. II: Allelopathy, spat survivorship and reef community structure. Marine Ecology, 22: 397-414.

Marnane, M.J. (2001). The trophic role of cardinalfishes (family Apogonidae) on coral reefs. PhD thesis, James Cook University.

Munday, P.L. (2001). Fitness consequences of habitat use and competition among coral-dwelling fishes. Oecologia, 128: 585-593.

Munday, P.L., G.P. Jones and M.J. Caley (2001). Interspecific competition and coexistence in a guild of coral-dwelling fishes. Ecology, 82(8): 2177-2189.

Negri, A.P., N.S. Webster, R.T. Hill and A.J. Heyward (2001). Metamorphosis of broadcast spawning corals in response to bacteria isolated from crustose algae. Marine Ecology Progress Series, 223: 121-131.

O'Dor, R.K., J.P. Aitken, R.C. Babcock, S.K. Bolden, S. Seino, D.C. Zeller and G.D. Jackson (2001). Using radio-acoustic positioning and telemetry (RAPT) to define and assess marine protected areas (MPAs). In: J.R. Sibert and J.L. Nielsen (eds.), Electronic Tagging and Tracking in Marine Fisheries, 147-166. Kluwer Academic Publishers: Netherlands.

Pankhurst, N.W. (2001). Stress inhibition of reproductive endocrine processes in a natural population of the spiny damselfish Acanthochromis polyacanthus. Marine and Freshwater Research, 52: 753-761.

Pratchett, M.S. (2001). Dynamics of outbreak populations of crown-of-thorns starfish (Acanthaster planci L.), and their effects on coral reef ecosystems. PhD thesis, James Cook University.

Pratchett, M.S. (2001). Influence of coral symbionts on feeding preferences of crown-of-thorns starfish Acanthaster planci in the western Pacific. Marine Ecology Progress Series, 214: 111-119.

Pratchett, M.S., N. Gust, G. Goby and S.O. Klanten (2001). Consumption of coral propagules represents a significant trophic link between corals and reef fish. Coral Reefs, 20: 13-17.

Puglisi, M., 2001. Ecological clues as a strategy for finding novel biomedical leads from Pacific gorgonian corals. PhD thesis, University of Mississippi, USA.

Purcell, S.W. and D.R. Bellwood (2001). Spatial patterns of epilithic algal and detrital resources on a windward coral reef. Coral Reefs, 20(2): 117-125.

Shields, J.D. (2001). Ovicides julieae n.gen., n. sp. (Nermertea: Carcinonemertidae) on xanthid crabs from the Great Barrier Reef, Australia. Journal of Crustacean Biology, 21(1): 304-312.

Siebeck, U.E. and N.J. Marshall (2001). Ocular media transmission of coral reef fish - can coral reef fish see ultraviolet light? Vision Research, 41: 133-149.

Stapleton, B.L., G.M. Cameron and M.L. Garson, 2001. New chlorinated peptides from the tropical marine sponge Dysidea sp. Tetrahedron, 57: 4603-4607.

Stewart, B.D. and G.P. Jones (2001). Associations between the abundance of piscivorous fishes and their prey on coral reefs: implications for prey-fish mortality. Marine Biology, 138(2): 383-397.

Syms, C. and G.P. Jones (2001). Soft corals exert no direct effects on coral reef fish assemblages. Oecologia, 127: 560-571.

Thompson, V.J. (2001). Habitat structure, social organisation and the reproductive biology of group-dwelling gobies. Honours thesis, James Cook University.

Uthicke, S. (2001). Nutrient regeneration by abundant coral reef holothurians. Journal of Experimental Marine Biology and Ecology, 265: 153-170.

Waegele, H. and G. Johnsen (2001). Observations on the histology and photosynthetic performance of "solar-powered" opisthobranchs (Mollusca, Gastropoda, Opisthobranchia) containing symbiotic chloroplasts or zooxanthellae. Organisms, Diversity and Evolution, 1: 193-210.

Webster, M.S. (2001). Factors affecting the dynamics and regulation of coral-reef fish populations. PhD thesis, Oregon State University, Corvallis, OR, USA.

Welch, D.J. (2001). Bias in size and age samples of Plectropomus leopardus, taken by line fishing among regions and management zones of the Great Barrier Reef. MSc thesis, James Cook University.

Wilson, S.K. (2001). An investigation into the trophic nature of small reef fish from the tribe Salariini, family Blennidae. PhD thesis, James Cook University.

Wilson, S. (2001). Multiscale habitat associations of detrivorous blennies (Blenniidae: Salariini). Coral Reefs, 20: 245-251.

Wilson, S.K., K. Burns and S. Codi (2001). Sources of dietary lipids in the coral reef blenny Salarias patzneri. Marine Ecology Progress Series, 222: 291-296.

Wilson, S., K. Burns and S. Codi (2001). Identifying sources of organic matter in sediments from a detritivorous coral reef fish territory. Organic Geochemistry, 32: 1257-1269.


LIRS publications in 2000: 47

Arnal, C. (2000). Écologie comportementale de la symbiose poisson nettoyeur/ poisson client: motivations et honnêteté. PhD thesis, University of Perpignan, France.

Arvedlund, M., K. Larsen and H. Winsor (2000). The embryonic development of the olfactory system in Amphiprion melanopus (Perciformes: Pomacentridae) related to the host imprinting hypothesis. Journal of the Marine Biological Association of the United Kingdom, 80:3599/1-7.

Arvedlund, M., M.I. McCormick and T. Ainsworth (2000). Effects of photoperiod on growth of larvae and juveniles of the anemonefish Amphiprion melanopus. Naga, The ICLARM Quarterly, 23(2):18-23.

Arvedlund, M., I. Bundgaard and L.E. Nielsen (2000). Host imprinting in anemonefishes (Pisces: Pomacentridae): does it dictate spawning site preferences? Environmental Biology of Fishes, 58: 203-213.

Baird, A.H. and T.P. Hughes (2000). Competitive dominance by tabular corals: an experimental analysis of recruitment and survival of understorey assemblages. Journal of Experimental Marine Biology and Ecology, 251: 117-132.

Berumen, M.L. (2000). Influence of diet and habitat on the condition of butterflyfish. MSc thesis, James Cook University.

Böhm, F., M.M. Joachimski, W. Dullo, A. Eisenhauer, H. Lehnert, J. Reitner and G. Wörheide (2000). Oxygen isotope fractionation in marine aragonite of coralline sponges. Geochimica et Cosmochimica Acta, 64(10): 1695-1703.

Bray, R.A. and C.B. Chambers (2000). A new macradeninine, Zebrasomatrema pichelinae n.g., n.sp. (Digenea: Lecithasteridae), from tangs (Perciformes: Acanthuridae) off the southern Great Barrier Reef, Queensland, Australia. Systematic Parasitology, 46: 105-109.

Bray, R.A, and T.H. Cribb (2000). The status of the genera Hysterolecithoides Yamaguti, 1934, Neotheletrum Gibson & Bray, 1979 and Machidatrema Leòn-Règagnon, 1998 (Digenea: Hemiuroidea), including a description of M. leonae n.sp. from Australian waters. Systematic Parasitology, 46: 1-22.

Byfield, T. (2000). Gastrointestinal ciliate (Protozoa) and megabacterium assemblages and host environment in herbivorous surgeonfish (Acanthuridae). MSc thesis, James Cook University.

Chiao, C-C. (2000). The influence of natural reflectance and illuminant spectra on the design and evolution of animal color vision. PhD thesis, University of Maryland, USA.

Chiao, C-C., M. Vorobyev, T.W. Cronin and D. Osorio (2000). Spectral tuning of dichromats to natural scenes. Vision Research 40: 3257-3271.

Chiao, C-C., T.W. Cronin and D. Osorio (2000). Color signals in natural scenes: characteristics of reflectance spectra and effects of natural illuminants. Journal of the Optical Society of America, 17(2): 218-224.

Chiao, C.-C., T.W. Cronin and N.J. Marshall (2000). Eye design and color signaling in a stomatopod crustacean Gonodactylus smithii. Brain, Behavior and Evolution, 56: 107-122.

Chisholm J.R.M. (2000). Calcification by crustose coralline algae on the northern Great Barrier Reef, Australia. Limnology and Oceanography, 45(7): 1476-1484.

Collard, S.B. (2000). Lizard Island: Science and Scientists on Australia's Great Barrier Reef. Franklin Watts, New York.

Cronin, T.W., N.J. Marshall and R.L. Caldwell (2000). Spectral tuning and the visual ecology of mantis shrimps. Philosophical Transactions of the Royal Society, London, B, 355:1263-1267.

Cumming, R.L. (2000). Distinguishing predation injuries inflicted by Drupella and Acanthaster. Reef Encounter, 27: 12-13.

Cumming, R.L. (2000). Do large aggregations of Drupella lead to population outbreaks? Reef Encounter, 27: 13-15.

Darling, K.F., C.M. Wade, I.A. Stewart, D. Kroon, R. Dingle and A.J. Leigh Brown (2000). Molecular evidence for genetic mixing of Arctic and Antarctic subpolar populations of planktonic foraminifers. Nature, 405 (4 May 2000): 43-47.

De Almeida Leone, P., J. Redburn, J.N.A. Hooper and R.J. Quinn (2000). Polyoxygenated Dysidea sterols that inhibit the binding of [I125] IL-8 to the human recombinant IL-8 receptor Type A. Journal of Natural Products, 63: 694-697.

Dudgeon, C.L., N. Gust and D. Blair (2000). No apparent genetic basis to demographic differences in scarid fishes across continental shelf of the Great Barrier Reef. Marine Biology, 137: 1059-1066.

Fulton, C.J. (2000). The relationship between swimming ability and habitat use in wrasses (Labridae). Honours thesis, James Cook University, Townsville.

Grutter, A.S. (2000). Ontogenetic variation in the diet of the cleaner fish Labroides dimidiatus and its ecological consequences. Marine Ecology Progress Series, 197: 241-246.

Grutter, A.S. and N.W. Pankhurst (2000). The effects of capture, handling, confinement and ectoparasite load on plasma levels of cortisol, glucose and lactate in the coral reef fish Hemigymnus melapterus. Journal of Fish Biology, 57: 391-401.

Grutter, A.S., J.A.T. Morgan and R.D. Adlard (2000). Characterising parasitic gnathiid isopod species and matching life stages with ribosomal DNA ITS2 sequences. Marine Biology, 136: 201-205.

Grutter, A.S., R.J.G. Lester and J. Greenwood (2000). Emergence rates from the benthos of the parasitic juveniles of gnathiid isopods. Marine Ecology Progress Series, 207: 123-127.

Gust, N. (2000). Multi-scale variability in the demographics and life histories of scarid fishes on the northern Great Barrier Reef. PhD thesis, James Cook University.

Hernaman, V., P.L. Munday and M.L. Schlaeppy (2000). Validation of otolith growth-increment periodicity in tropical gobies. Marine Biology, 137: 715-726.

Hughes, T.P., A.H. Baird, E.A. Dinsdale, N.A. Moltschaniwskyj, M.S. Pratchett, J.E. Tanner and B.L. Willis (2000). Supply-side ecology works both ways: the link between benthic adults, fecundity, and larval recruits. Ecology, 81(8): 2241-2249.

Kavanagh, K.D. (2000). Larval brooding in the marine damselfish Acanthochromis polyacanthus (Pomacentridae) is correlated with highly divergent morphology, ontogeny and life-history traits. Bulletin of Marine Science, 66(2): 321-337.

Kospartov, M.C. (2000). A multi-scale investigation of the size structure of coral populations. Honours thesis, James Cook University.

Leis, J.M. (2000). Out of the blue. Nature Australia, Spring: 52-59.

Leis, J.M. and B.M. Carson-Ewart (2000). Larvae of Indo-Pacific Coastal Fishes. Brill, Leiden. 850 pp.

Marshall, N.J. (2000). Communication and camouflage with the same "bright" colours in reef fishes. Philosophical Transactions of the Royal Society, London, B, 355:1243-1248.

Munday, P.L. (2000). Changing Sex. Nature Australia, Summer 2000-2001: 51-59.

Negri, A.P. and A.J. Heyward (2000). Inhibition of fertilization and larval metamorphosis of the coral Acropora millepora (Ehrenberg, 1834) by petroleum products. Marine Pollution Bulletin, 41: 420-427.

Newman, L.J. and L.R.G. Cannon (2000). A new genus of euryleptid flatworm (Platyhelminthes, Polycladida) from the IndoPacific. Journal of Natural History, 34(2): 191-205.

Pankhurst, N.W., P.M. Pankhurst, P.I. Hilder and M.L. Hilder (2000). In vivo and in vitro ovarian steroid production by fish from a natural population of the brooding tropical damselfish Acanthochromis polyacanthus. Pp 99-102 in: Proceedings of the 6th International Symposium on the Reproductive Physiology of Fish (Eds. B. Norberg, O.S. Kjesbu, G.L. Taranger, E. Andersson and S.O. Stefansson). John Greig A/S, Bergen.

Pratchett, M.S., E. Vytopil and P. Parks (2000). Coral crabs influence the feeding patterns of crown-of-thorns starfish. Coral Reefs, 19: 36.

Puglisi, M.P., V.J. Paul and M. Slattery (2000). Biogeographic comparisons of chemical and structural defenses of the Pacific gorgonians Anella mollis and A. reticulata. Marine Ecology Progress Series, 207: 263-272.

Purcell, S.W. (2000). Association of epilithic algae with sediment distribution on a windward reef in the northern Great Barrier Reef, Australia. Bulletin of Marine Science, 66(1): 199-214.

Siebeck, U.E. and N.J. Marshall (2000). Transmission of ocular media in labrid fishes. Philosophical Transactions of the Royal Society, London, B, 355: 1257-1261.

Stewart, B.D. and J.S. Beukers (2000). Baited technique improves censuses of cryptic fish in complex habitats. Marine Ecology Progress Series, 197: 259-272.

Syms, C. and G.P. Jones (2000). Disturbance, habitat structure, and the dynamics of a coral-reef fish community. Ecology, 81(10): 2714-2729.

Wilson, S.K. (2000). Trophic status and feeding selectivity of blennies (Blenniidae: Salariini). Marine Biology, 136: 431-437.

Zeller, D.C. and G.R. Russ (2000). Population estimates and size structure of Plectropomus leopardus (Pisces: Serranidae) in relation to no-fishing zones: mark - release - resighting and underwater visual census. Marine and Freshwater Research, 51: 221-228.


LIRS publications in 1999: 48

Adamo, S.A. and K.J. Weichelt (1999). Field observations of schooling in the oval squid, Sepioteuthis lessoniana (Lesson, 1830). Journal of Molluscan Studies, 65: 377-380.

Antonius, A. (1999). Halofolliculina corallasia, a new coral-killing ciliate on Indo-Pacific reefs. Coral Reefs, 18: 300.

Arvedlund, M., M.I. McCormick, D.G. Fautin and M. Bildsoe (1999). Host recognition and possible imprinting in the anemonefish Amphiprion melanopus (Pisces: Pomacentridae). Marine Ecology Progress Series, 188: 207-218.

Baker, A.C. (1999). The symbiosis ecology of reef-building corals. PhD thesis, University of Miami, USA.

Bandaranayake, W.M. and A. Des Rocher, 1999. Role of secondary metabolites and pigments in the epidermal tissues, ripe ovaries, viscera, gut contents and diet of the sea cucumber Holothuria atra. Marine Biology, 133: 163-169.

Bay, L.K. (1999). Interactions among the territorial behaviour, spatial distribution and habitat use of four congeneric damselfishes (Dischistodus: Pomacentridae). Honours thesis, James Cook University.

Chen, L. (1999). Ontogenetic development in post-settlement scarids (Pisces: Scaridae): transition in feeding modes. PhD thesis, James Cook University, Australia.

Chisholm, L.A. and I.D. Whittington (1999). Empruthotrema quindecima sp. n. (Monogenea: Monocotylidae) from the nasal fossae of Taeniura lymma (Dasyatididae) from Heron Island and Lizard Island, Great Barrier Reef, Queensland, Australia. Folia Parasitologica, 46(4): 274-278.

Cribb, T. H., Wright, T. and Bray, R. A. (1999). The genus Deretrema Linton, 1910 (Digenea: Zoogonidae) from southern Great Barrier Reef fishes, with a description of Deretrema woolcockae n. sp. Systematic Parasitology, 44: 139-144.

Crook, A.C. (1999). A quantitative analysis of the relationship between interspecific encounters, schooling behaviour and colouration in juvenile parrotfish (family Scaridae). Marine and Freshwater Behaviour and Physiology, 33: 1-19.

Crook, A.C. (1999). Quantitative evidence for assortative schooling in a coral reef fish. Marine Ecology Progress Series, 176: 17-23.

Cumming, R.L. (1999). Predation on reef-building corals: multiscale variation in the density of three corallivorous gastropods, Drupella spp. Coral Reefs, 18: 147-157.

Darling, K.F., C.M. Wade, D. Kroon, A.J. Leigh Brown and J. Bijma, 1999. The diversity and distribution of modern planktic foraminiferal small subunit ribosomal RNA genotypes and their potential as tracers of present and past ocean circulations. Paleoceanography, 14(1): 3-12.

De Sloover, J. R. and M. Dufrene (1999). Flora and vegetation of Turtell V, Turtell Islands Group (Queensland, Australia). Bull. Jard. Bot. Nat. Belg./ Bull. Nat. Plantentuin Belg. 67: 45-97.

Dixon, P.A., M.J. Milicich and G. Sugihara (1999). Episodic fluctuations in larval supply. Science, 283(5407): 1528-1530.

Dubilier, N., R. Amann, C. Erséus, G. Muyzer, S.Y. Park, O. Giere and C.M. Cavanaugh (1999). Phylogenetic diversity of bacterial endosymbionts in the gutless marine oligochete Olavius loisae (Annelida). Marine Ecology Progress Series, 178: 271-280.

Fiege, D. and H.A. Ten Hove (1999). Redescription of Spirobranchus gaymardi (Quatrefages, 1866) (Polychaeta: Serpulidae) from the Indo-Pacific with remarks on the Spirobranchus giganteus complex. Zoological Journal of the Linnean Society, 126: 355-364.

Fisk, D.A. and M.C. Power (1999). Development of cost-effective control strategies for crown-of-thorns starfish. CRC Reef Research Centre Technical Report 25: 1-63. CRC Reef Research Centre, Townsville.

Gleibs, S and D. Mebs (1999). Distribution and sequestration of palytoxin in coral reef animals. Toxicon, 37: 1521-1527.

Grutter, A.S. (1999). Cleaner fish really do clean. Nature, 398 (22 April 1999): 672-673.

Grutter, A.S. (1999). Infestation dynamics of gnathiid isopod juveniles parasitic on the coral-reef fish Hemigymnus melapterus (Labridae). Marine Biology, 135: 545-552.

Hall, K.A. and C.B. Chambers (1999). A new genus of the Gyliauchenidae Goto et Matsudaira, 1918 (Digenea) from Naso tuberosus (Percomorpha, Acanthuridae) on the Great Barrier Reef, Queensland, Australia.Acta Parasitologica, 44(4): 229-232.

Hallett, S.L., C. Erseus and R.J.G. Lester (1999). Actinosporeans (Myxozoa) from marine oligochaetes of the Great Barrier Reef. Systematic Parasitology, 44(1): 49-57.

Harold, A.S and R. Winterbottom, 1999. Gobiodon brochus: a new species of gobiid fish (Teleostei: Gobioidei) from the Western South Pacific, with a description of its unique jaw morphology. Copeia, 1999(1): 49-57.

Heyward, A.J. and A.P. Negri (1999). Natural inducers for coral larval metamorphosis. Coral Reefs, 18: 273-279.

Hooper, J.N.A., S.E. List-Armitage, J.A. Kennedy, S.D. Cook, and C.A. Valentine (1999). Sponges of the Low Isles, Great Barrier Reef: an important scientific site, or a case of mistaken identity? Memoirs of the Queensland Museum, 44: 249-262.

Hooper, J.N.A., J.A. Kennedy, S.E. List-Armitage, S.D. Cook, and R. Quinn (1999). Biodiversity, species composition and distribution of marine sponges in northeast Australia. Memoirs of the Queensland Museum, 44: 263-274.

Hughes, T.P., A.H. Baird, E.A. Dinsdale, N.A. Moltschaniwskyj, M.S. Pratchett, J.E. Tanner and B.L. Willis (1999). Patterns of recruitment and abundance of corals along the Great Barrier Reef. Nature, 397 (7 January 1999): 59-63.

Jones, G.P., M.J. Milicich, M.J. Emslie and C. Lunow (1999). Self-recruitment in a coral reef fish population. Nature, 402: 802-804.

Leis, J.M. and B.M. Carson-Ewart (1999). In situ swimming and settlement behaviour of larvae of an Indo-Pacific coral-reef fish, the coral trout Plectropomus leopardus (Pisces: Serranidae). Marine Biology, 134: 51-64.

Leis, J.M. and I. C. Stobutzki (1999). Swimming performance of late pelagic larvae of coral-reef fishes: in situ and laboratory-based measurements. Proceedings of the Fifth Indo-Pacific Fish Conference, Noumea, 1997. Soc. Fr. Ichtyol., 1999: 575-583.

Losey, G.S., A.S. Grutter, G. Rosenquist, J.L. Mahon and J.P. Zamzow (1999). Cleaning symbiosis: a review. Pp 379-395 in: Almada, V.C., Oliveira, R.F., Goncalves, E.J. (Eds.), "Behaviour and conservation of littoral fishes". I.S.P.A.: Lisboa, Portugal.

Losey, G.S., T.W. Cronin, T.H. Goldsmith, D. Hydes, N.J. Marshall, and W.N. McFarland (1999). The UV visual world of fishes: a review. Journal of Fish Biology, 54: 921-943.

McCormick, M.I. (1999). Experimental test of the effect of maternal hormones on larval quality of a coral reef fish. Oecologia, 118(4): 412-422.

Munday, P.L. (1999). The relationship between habitat use and the population ecology of coral-dwelling fishes (Genus Gobiodon). PhD thesis, James Cook University.

Munday, P.L., A.S. Harold and R. Winterbottom (1999). Guide to coral-dwelling gobies, genus Gobiodon (Gobiidae), from Papua New Guinea and the Great Barrier Reef. Revue fr. Aquariol., 26(1-2): 53-58.

Pankhurst, N.W., P.I. Hilder, and P.M. Pankhurst (1999). Reproductive condition and behavior in relation to plasma levels of gonadal steroids in the spiny damselfish Acanthochromis polyacanthus. General and Comparative Endocrinology, 115: 53-69.

Pratchett, M.S. (1999). An infectious disease in crown-of-thorns starfish on the Great Barrier Reef. Coral Reefs, 18: 272.

Randerson, J. (1999). Plenty of fish in the sea? BBC Wildlife Feb 99.

Schubert, M. (1999). Skin toxins and the ecology of coral gobies (Gobiodon: Gobiidae). Honours thesis, James Cook University.

Smith, L.D. and T.P. Hughes (1999). An experimental assessment of survival, re-attachment and fecundity of coral fragments. Journal of Experimental Marine Biology and Ecology, 235: 147-164.

Srinivasan, M., G.P. Jones and M.J. Caley (1999). Experimental evaluation of the roles of habitat selection and interspecific competition in determining patterns of host use by two anemonefishes. Marine Ecology Progress Series, 186: 283-292.

St. John, J. (1999). Ontogenetic changes in the diet of the coral reef grouper Plectropomus leopardus (Serranidae): patterns in taxa, size and habitat of prey. Marine Ecology Progress Series, 180: 233-246.

Thiel, V., A. Jenisch, G. Woerheide, A. Loewenberg, J. Reitner and W. Michaelis (1999). Mid-chain branched alkanoic acids from "living fossil" demosponges: a link to ancient sedimentary lipids? Organic Geochemistry, 30: 1-14.

Uthicke, S. (1999). Sediment bioturbation and impact of feeding activity of Holothuria (Halodeima) atra and Stichopus chloronotus, two sediment feeding holothurians, at Lizard Island, Great Barrier Reef. Bulletin of Marine Science, 64(1): 129-141.

Uthicke, S and R. Karez (1999). Sediment patch selectivity in tropical sea cucumbers (Holothurioidea: Aspidochirotida) analysed with multiple choice experiments. Journal of Experimental Marine Biology and Ecology, 236: 69-87.

Wilson, D.T. and M.I. McCormick (1999). Microstructure of settlement-marks in the otoliths of tropical reef fishes. Marine Biology, 134: 29-41.

Zeller, D.C. (1999). Ultrasonic telemetry: its application to coral reef fisheries research. Fisheries Bulletin (Washington), 97(4): 1058-1065.


LIRS publications in 1998: 38

Beukers, J.S. and G.P. Jones (1998). Habitat complexity modifies the impact of piscivores on a coral reef fish population. Oecologia, 114: 50-59.

Blaber, S.J.M., D.A. Milton, M.J. Farmer and G.C. Smith (1999). Seabird breeding populations on the far northern Great Barrier Reef, Australia: Trends and influences. Emu, 98: 44-57.

Borden, W.C. (1998). Phylogeny of the unicornfishes (Naso, Acanthuridae) based on soft anatomy. Copeia, 1998(1): 104-113.

Bray, R.A. and T.H. Cribb (1998). Lepocreadiidae (Digenea) of Australian coastal fishes: new species of Opechona Looss, 1907, Lepotrema Ozaki, 1932 and Bianium Stunkard, 1930 and comments on other species reported for the first time or poorly known in Australian waters. Systematic Parasitology, 41: 123-148.

Chisholm, J.R.M. and D.J. Barnes, 1998. Anomalies in coral reef community metabolism and their potential importance in the reef CO2 source-sink debate. Proceedings of the National Academy of Sciences, 95: 6566-6569.

Choat, J.H. and K.D. Clements (1998). Vertebrate herbivores in marine and terrestrial environments: a nutritional ecology perspective. Annual Review of Ecology and Systematics, 29: 375-403.

Cribb, T. H., G.R. Anderson, R.D. Adlard and R.A. Bray (1998). A DNA-based demonstration of a three-host life-cycle for the Bivesiculidae (Platyhelminthes: Digenea). International Journal for Parasitology, 28: 1791-1795.

Eeckhaut, I., M.J. Grygier and D. Deheyn (1998). Myzostomes from Papua New Guinea, with related Indo-west Pacific distribution records and description of five new species. Bulletin of Marine Science, 62(3): 841-886.

Green, A.L. (1998). Spatio-temporal patterns of recruitment of labroid fishes (Pisces: Labridae and Scaridae) to damselfish territories. Environmental Biology of Fishes, 51: 235-244.

Grutter, A.S. and R. Poulin (1998). Intraspecific and interspecific relationships between host size and the abundance of parasitic larval gnathiid isopods on coral reef fishes. Marine Ecology Progress Series, 164: 263-271.

Grutter, A.S and R. Poulin (1998). Cleaning of coral reef fishes by the wrasse Labroides dimidiatus: Influence of client body size and phylogeny. Copeia, 1998 (1): 120-127.

Hall, V. R. (1998). Injury and regeneration of common reef-crest corals at Lizard Island, Great Barrier Reef, Australia. PhD thesis, James Cook University, Australia.

Hughes, T.P. (1998). Off-reef transport of coral fragments at Lizard Island, Australia. Marine Geology, 157: 1-6.

Kavanagh, K. (1998). Notes on the frequency and function of glancing behaviour in juvenile Acanthochromis (Pomacentridae). Copeia, 1998 (2): 493-496.

Klanten, S.O. (1998). Does morphology predict ecology in coral reef fishes? Honours thesis, James Cook University.

Leis, J.M. and B.M. Carson-Ewart (1998). Complex behaviour by coral-reef fish larvae in open-water and near-reef pelagic envionments. Environmental Biology of Fishes, 53: 259-266.

Mahon, J.L., 1998. The advantage of juvenile coloration in reef fishes. PhD thesis, University of Hawaii at Manoa.

McCormick, M.I. (1998). Behaviourally induced maternal stress in a fish influences progeny quality by a hormonal mechanism. Ecology, 79(6): 1873-1883.

McCormick, M.I. (1998). Condition and growth of reef fish at settlement: is it important? Australian Journal of Ecology, 23: 258-264.

Milner, R. (1998). Gender-bending Gobies. Natural History, 108: 2.

Milton, D. (1998). Distribution and abundance of beach stone-curlews on northern Great Barrier Reef islands. Sunbird 28(2): 31-38.

Milton, D.A., S.J.M. Blaber, M.J. Farmer and G.C. Smith (1998). Changes in the abundance of seabirds in the northern trawl region of the Great Barrier Reef, Queensland. Emu, 98: 44-57.

Motluk, A. (1998). When a quick sex change pays. New Scientist, 13 June 1998: 22.

Munday, P.L., M.J. Caley and G.P. Jones (1998). Bi-directional sex change in a coral-dwelling goby. Behavioural Ecology and Sociobiology, 43: 371-377.

Munday, P.L. and G.P. Jones (1998). The ecological implications of small body size among coral-reef fishes. Oceanography and Marine Biology: an Annual Review, 36: 373-411.

Munday P.L., G.P. Jones, M.C. Ohamn and U.L. Kaly, (1998). Enhancement of recruitment to coral reefs using light-attractors. Bulletin of Marine Science, 63(3): 581-588.

Ohman, M.C., P.L. Munday, G.P. Jones and M.J. Caley (1998). Settlement strategies and distribution patterns of coral-reef fishes. Journal of Experimental Marine Biology and Ecology, 225: 219-238.

Shields, J.D. and L.A. Ward (1998). Tiarinion texopallium, new species, an entoniscid isopod infesting majid crabs (Tiarinia spp,) from the Great Barrier Reef, Australia. Journal of Crustacean Biology, 18(3): 590-596.

Steven, A.D.L., L. Trott, F. Pantus and D. Brooks, (1998). Long-term chlorophyll monitoring in the Great Barrier Reef lagoon: Status report 1, 1993-1995. Great Barrier Reef Marine Park Authority Research Publication No. 55. Great Barrier Reef Marine Park Authority, Australia.

Stewart, B.D. (1998). Interactions between piscivorous coral reef fishes and their prey. PhD thesis, James Cook University, Australia.

Stobutzki, I.C. (1998). Interspecific variation in sustained swimming ability of late pelagic stage reef fish from two families (Pomacentridae and Chaetodontidae). Coral Reefs, 17: 111-119.

Stobutzki, I.C. and D.R. Bellwood (1998). Nocturnal orientation to reefs by late pelagic stage coral reef fishes. Coral Reefs, 17: 103-110.

Syms, C. (1998). Disturbance and the structure of coral reef fish communities on the reef slope. Journal of Experimental Marine Biology and Ecology, 230: 151-167.

Syms, C. (1998). Habitat association, disturbance dynamics, and the role of spatial scale in structuring coral reef fish assemblages. PhD thesis, James Cook University, Australia.

Uthicke, S. (1998). Population structure of Holothuria (Halodeima) atra (Jager, 1833) and Stichopus chloronotus (Brandt, 1835) (Holothuroidea: Aspidochirotida) and their role in nutrient recycling in coral reef ecosystems. PhD thesis, University of Hamburg, Germany.

Woerheide, G. (1998). The reef cave dwelling ultraconservative coralline demosponge Astrosclera willeyana Lister 1900 from the Indo-Pacific. Facies, 38: 1-88.

Zeller, D.C. (1998). Spawning aggregations: patterns of movement of the coral trout Plectropomus leopardus (Serranidae) as determined by ultrasonic telemetry. Marine Ecology Progress Series, 162: 253-263.

Zeller, D.C. and G.R. Russ (1998). Marine reserves: patterns of adult movement of the coral trout (Plectropomus leopardus (Serranidae)). Canadian Journal of Fisheries and Aquatic Sciences, 55: 917-924.


LIRS publications in 1997: 57

Ayre, D.J., T.P. Hughes and R.J. Standish (1997). Genetic differentiation, reproductive mode, and gene flow in the brooding coral Pocillopora damicornis along the Great Barrier Reef, Australia. Marine Ecology Progress Series, 159: 175-187.

Baird, A.H., and T.P. Hughes (1997). Spatial variation in coral recruitment around Lizard Island, Australia. Proceedings of the Eighth International Coral Reef Symposium, Panama, 2: 1207-1210.

Brodie, G.D., R.C. Willan and J.D. Collins (1997). Taxonomy and occurrence of Dendrodoris nigra and Dendrodoris fumata (Nudibranchia: Dendrodorididae) in the Indo-west Pacific region. Journal of Molluscan Studies, 63: 407-423.

Caley, M.J. (1997). Are local patterns of reef fish diversity related to patterns of diversity at a larger scale? Proceedings ot the Eighth International Coral Reef Symposium, Panama, 1: 993-998.

Castro, P. (1997). Trapeziid crabs (Brachyura: Xanthoidea: Trapeziidae) of New Caledonia, eastern Australia, and the Coral Sea. In: Richer de Forges (ed.), Les fonds meubles des lagons de Nouvelle Caledonie (Sedimentologie, Benthos). Etudes & Theses, volume 3: 59-107, Paris: ORSTOM.

Clements, K.D. (1997). Fermentation and gastrointestinal microorganisms in fishes. In: Gastrointestinal microbiology. Vol. 1: Gastrointestinal ecosystems and fermentations (eds. R.I. Mackie and B.A. White). Chapman and Hall, New York, pp. 156-198.

Clements, K.D. and J.H. Choat (1997). Comparison of herbivory in the closely-related marine fish genera Girella and Kyphosus. Marine Biology, 127: 579-586.

Crook, A.C. (1997). Behavioural patterns and the significance of colour patterns in reef fishes of the family Scaridae. PhD thesis, James Cook University.

Crook, A.C. (1997). Colour patterns in a coral reef fish: is background complexity important? Journal of Experimental Marine Biology and Ecology, 217: 237-252.

Crook, A.C. (1997). Determinants of the physiological colour patterns of juvenile parrotfish, Chlorurus sordidus. Animal Behaviour, 53: 1251-1261.

Darling, K.F., C.M. Wade, D. Kroon and A.J. Leigh Brown (1997). Planktic foraminiferal molecular evolution and their polyphyletic origins from benthic taxa. Marine Micropaleontology, 30: 251-266.

De Sloover, J.R. and S. Liegeois (1997). Eagle Island, flora and vegetation (Queensland, Australia). Bull. Jard. Bot. Nat. Belg./ Bull. Nat. Plantentuin Belg., 66: 347-383.

Eagle, J.V. (1997). Comparative ecology and life history of pygmy angelfishes (Centropyge: Pomacanthidae). Honours thesis, James Cook University, Australia.

Fautin, D.G. and D.R. Smith, 1997. Clonality as a taxonomic character of actinian species. Proceedings of the 8th International Coral Reef Symposium, 2: 1609-1612.

Fisk, D., L. Vail and A. Hoggett (1997). Cost-effective small-scale crown-of-thorns starfish eradication procedures using acid injections. "Great Barrier Reef, science use and management: a national conference: proceedings." Volume 2, pp 79-85. Great Barrier Reef Marine Park Authority, Townsville.

Grutter, A.S. (1997). Size-selective predation by the cleaner fish Labroides dimidiatus. Journal of Fish Biology, 50: 1303-1308.

Grutter, A.S. (1997). Effect of the removal of cleaner fish on the abundance and species composition of reef fish. Oecologia, 111: 137-143.

Grutter, A.S. (1997). Spatiotemporal variation and feeding selectivity in the diet of the cleaner fish Labroides dimidiatus. Copeia, 1997: 346-355.

Hall, V.R. (1997). Interspecific differences in the regeneration of artificial injuries on scleractinian corals. Journal of Experimental Marine Biology and Ecology, 212: 9-23.

Hilomen, V.V. (1997). Inter- and intra-habitat movement patterns and population dynamics of small reef fishes of commercial and recreational significance. PhD thesis, James Cook University.

Huber, B.T., 1997. Cryptic speciation in the living planktonic foaminifer Globerigerinella siphonifera (d'Orbigny). Palaeobiology, 23: 33-62.

Humes, A.G. (1997). Pseudanthessius newmanae, new species (Copepoda: Poecilostomatoida: Pseudanthessiidae) from marine turbellarians in Australia. Memoirs of the Queensland Museum, 42(1): 227-231.

Kerrigan, B.A. (1997). Variability in larval development of the tropical reef fish Pomacentrus amboinensis (Pomacentridae): the parental legacy. Marine Biology, 127: 395-402.

Lee, J.J., J. Morales, S. Bacus, A. Diamont, P. Hallock, J. Pawlowski and J. Thorpe, 1997. Progress in characteriszing the endosymbiotic dinoflagellates of soritid foraminifera and related studies on some stages in the life cycle of Marginopora vertebralis. Journal of Foraminiferal Research, 21(4): 254-263.

Lehnert, H. and J. Reitner (1997). Lebensdauer und regeneration bei Ceratoporella nicholsoni (Hickson, 1911) und Spirastrella (Acanthochaetetes) wellsi (Hartman & Goreau, 1975). Geol. Bl. NO-Bayern, 47: 265-272.

Leis, J.M. and B. Carson-Ewart (1997). In situ swimming speeds of the late pelagic larvae of some Indo-Pacific coral-reef fishes. Marine Ecology Progress Series, 159: 165-174.

Leis, J.M., S. Bullock, D.J. Bray and K. Lee (1997). Larval development in the lutjanid subfamily Aplisinae (Pisces): the genus Paracaesio. Bulletin of Marine Science, 61(3): 697-742.

McCormick, M.I. and L.J. Makey (1997). Post-settlement transition in coral reef fishes: overlooked complexity in niche shifts. Marine Ecology Progress Series, 153: 247-257.

McIlwain, J.L. and G.P. Jones (1997). Prey selection by an obligate coral-feeding wrasse and its response to small-scale disturbance. Marine Ecology Progress Series, 155: 189-198.

McKenzie, L.J., W.J. Lee Long and E.J. Bradshaw (1997). Distribution of seagrasses in the Lizard Island Group - a reconnaissance survey, October 1995. CRC Reef Research Centre Technical Report No. 14., 26 pp.

Meekan, M.G. and J.H. Choat (1997). Latitudinal variation in abundance of herbivorous fishes: a comparison of temperate and tropical reefs. Marine Biology, 128: 373-383.

Meyer, D.L. (1997). Reef crinoids as current meters: feeding responses to variable flow. Proceedings of the Eighth International Coral Reef Symposium, 2: 1127-1130.

Miller, R.L. (1997). Specificity of sperm chemotaxis among Great Barrier Reef shallow-water holothurians and ophiuroids. Journal of Experimental Zoology, 279: 189-200.

Miller, R.L. and J. Cosson, 1997. Timing of sperm shedding and release of aggregates in the salp Thalia democratica (Urochordata: Thaliacea). Marine Biology, 129: 607-614.

Munday, P.L., G.P. Jones and M.J. Caley (1997). Habitat specialisation and the distribution and abundance of coral-dwelling gobies. Marine Ecology Progress Series, 152: 227-239.

Munday, P.L. and S.K. Wilson (1997). Comparative efficacy of clove oil and other chemicals in anaesthetization of Pomacentrus amboinensis, a coral reef fish. Journal of Fish Biology, 51: 931-938.

Newman, L.J. and L.R.G. Cannon (1997). Nine new species of Pseudobiceros (Platyhelminthes: Polycladida) from the Indo-Pacific. Raffles Bulletin of Zoology, 45(2): 341-368.

Nuetzel, A. (1997). Ueber die Stammesgeschichte der Ptenoglossa (Gastropoda). Berliner Geowissenschaftliche Abhandlungen Reihe E Palaeobiologie, 26: 1-229.

Okaji, K., T. Ayukai and J.S. Lucas (1997). Selective feeding by larvae of the crown-of-thorns starfish, Acanthaster planci (L.). Coral Reefs, 16: 47-50.

Pain, S. (1997). Swimming for dear life. New Scientist, 2099: 28-32.

Pankhurst, N.W., C.W. Barnett, P.I. Butler, P.M. Pankhurst and A.C. Hobby (1997). Environmental disturbance, reproductive behaviour and plasma steroid levels in the spiny damselfish Acanthochromis polyacanthus. In "Advances in Comparative Endocrinology" (Eds S. Kawashima and S. Kikuyama). Proceedings of the 13th International Congress of Comparative Endocrinology, Yokohama, Japan, pp. 1707-1713.

Purcell, S.W. (1997). Quantifying organic content of material from coral reefs. "Great Barrier Reef, science, use and management: a national conference: proceedings." Volume 2, pp 61-66. Great Barrier Reef Marine Park Authority, Townsville.

Purcell, S.W. (1997). The role of sediments in epilithic algal communities on coral reefs. PhD thesis, James Cook University, Australia.

Reitner, J. and G. Schumann-Kindel (1997). Pyrite in mineralized sponge tissue - product of sulfate reducing sponge related bacteria? Facies, 36: 272-276 (References separately paginated, pp. 276-284).

Reitner, J., G. Woerheide, R. Lange and V. Theil (1997). Biomineralization of calcified skeletons in three Pacific coralline demosponges - an approach to the evolution of basal skeletons. Cour. Forsch.- Inst. Senckenberg, 201: 371-383.

Shand, J. (1997). Ontogenetic changes in retinal structure and visual acuity: a comparative study of coral-reef teleosts with differing post-settlement lifestyles. Environmental Biology of Fishes, 49: 307-322.

Stobutzki, I.C. (1997). Energetic cost of sustained swimming in the late pelagic stages of reef fishes. Marine Ecology Progress Series, 152: 249-259.

Stobutzki, I.C. (1997). Swimming abilities and orientation behaviour of pre-settlement coral reef fishes. PhD thesis, James Cook University, Australia.

Stobutzki, I.C. and D.R. Bellwood (1997). Sustained swimming abilities of the late pelagic stages of coral reef fishes. Marine Ecology Progress Series, 149: 35-41.

Talbot, M.S. (1997). Doxomysis acanthina, a new leptomysinid (Crustacea: Mysidacea) from the northern Great Barrier Reef, Australia, with extensions to the known distributions of D. australiensis W.M. Tattersall, 1940 and D. spinata Murano, 1990, and a key to the genus Doxomysis. Proceedings of the Biological Society of Washington, 110: 426-438.

Wade, C.M., 1997. Analysis of HIV-1 and foraminiferal molecular evolution. PhD thesis, University of Edinburgh.

Wilson, D.T. and M.I. McCormick (1997). Spatial and temporal validation of settlement-marks in the otoliths of tropical reef fishes. Marine Ecology Progress Series, 153: 259-271.

Wilson, S. and D.R. Bellwood (1997). Cryptic dietary components of territorial damselfishes (Pomacentridae, Labroidei). Marine Ecology Progress Series, 153: 299-310.

Woerheide, G. (1997) The reef cave dwelling ultraconservative coralline demosponge Astrosclera willeyana Lister 1900 from the Indo-Pacific. PhD thesis, University of Gottingen, Germany.

Woerheide, G., P. Gautret, J. Reitner, F. Boehm, M. Joachimski, V. Theil, W. Michaelis and M. Massault (1997). Basal skeletal formation, role and preservation of intracrystalline organic matrices, and isotopic record in the coralline sponge Astrosclera willeyana Lister 1900. Bol. R. Soc. Esp. Hist. Nat. (Sec. Geol.), 91: 355-374.

Woerheide, G., J. Reitner and P. Gautret (1997). Comparison of biocalcification processes in the two coralline demosponges Astrosclera willeyana Lister 1900 and "Acanthochaetetes" wellsi Hartman and Goreau 1975. Proceedings of the 8th International Coral Reef Symposium, Panama, 2: 1427-1432.

Zeller, D. (1997). Home range and activity patterns of the coral trout Plectropomus leopardus (Serranidae). Marine Ecology Progress Series, 154: 65-77.


LIRS publications in 1996: 46

Bellwood, D.R. (1996). Production and reworking of sediment by parrotfishes (family Scaridae) on the Great Barrier Reef, Australia. Marine Biology, 125: 795-800.

Bellwood, D.R. (1996). The Eocene fishes of Monte Bolca: the earliest coral reef fish assemblage. Coral Reefs, 15: 11-19.

Bellwood, D.R. (1996). Coral reef crunchers. Nature Australia, Autumn: 48-55.

Bergbauer, M., R. Lange and J. Reitner (1996). Characterization of organic matrix proteins enclosed in high Mg-calcite crystals of the coralline sponge Spirastrella (Acanthochaetetes) wellsi. In: "Global and Regional Controls on Biogenic Sedimentation. I. Reef Evolution. Research reports." (Eds. J. Reitner, F. Neuweiler and F. Gunkel). Gottinger Arbeiten zur Geologie und Palaontologie, Sb2: 9-12.

Beukers, J.S. (1996). The relative roles of recruitment and post-recruitment processes in the regulation of a coral reef damselfish population. PhD thesis, James Cook University, Australia.

Bray, R.A. and T.H. Cribb (1996). Preptetos and Neopreptetos (Digenea: Lepocreadiidae) from Australian marine fishes. Folia Parasitologica, 43: 209-226.

Bray, R. A. and T.H. Cribb (1996). The Australian species of Lobatocreadium Madhavi, 1972, Hypocreadium Ozaki, 1936 and Dermadena Manter, 1945 (Digenea: Lepocreadiidae), parasites of marine tetraodontiform fishes. Systematic Parasitology, 35: 217-236.

Caley, M.J. and J. St John (1996). Refuge availability structures assemblages of tropical reef fishes. Journal of Animal Ecology, 65: 414-428.

Cannon, L. & L. Newman (1996). Trepang: treasure or tragedy? Wildlife Australia, Summer 1995-96: 16-17.

Choat, J.H. and L.M. Axe (1996). Growth and longevity in acanthurid fishes; an analysis of otolith increments. Marine Ecology Progress Series, 134: 15-26.

Choat, J.H., L.M. Axe and D.C. Lou (1996). Growth and longevity in fishes of the family Scaridae. Marine Ecology Progress Series, 145: 33-41.

Clements, K.D. and J.E. Randall (1996). Four new records of surgeonfishes (Perciformes:Acanthuridae) from the Great Barrier Reef. Memoirs of the Queensland Museum, 39: 339-342.

Cumming, R.L. (1996). The corallivorous gastropods Drupella cornus, D. fragum and D. rugosa: ecology and impact on coral communities at Lizard Island, Great Barrier Reef. PhD thesis, James Cook University, Australia.

Elliott, J.K. and R.N. Mariscal, 1996. Ontogenetic and interspecific variation in the protection of anemonefishes from sea anemones. Journal of Experimental Marine Biology and Ecology, 208: 57-72.

Eros, C.M.(1996). Acoustic repertoire in the territorial and courtship behaviour of Stegastes apicalis (Pomacentridae). MSc thesis, James Cook University, Australia.

Goggin, C.L. (1996). Effect of Perkinsus olseni (Protozoa, Apicomplexa) on the weight of Tridacna crocea (Mollusca, Bivalvia) from Lizard Island, Great Barrier Reef. Aquaculture, 141: 25-30.

Green, A.L. (1996). Spatial, temporal and ontogenetic patterns of habitat use by coral reef fishes (Family Labridae). Marine Ecology Progress Series, 133: 1-11.

Grutter, A.S. (1996). Parasite removal rates by the cleaner wrasse Labroides dimidiatus. Marine Ecology Progress Series, 130: 61-70.

Grutter, A.S. (1996). Experimental demonstration of no effect by the cleaner wrasse Labroides dimidiatus (Cuvier and Valenciennes) on the host fish Pomacentrus moluccensis (Bleeker). Journal of Experimental Marine Biology and Ecology, 196: 285-298.

Hall, V.R. (1996). Effects of injury on growth, reproduction and survivorship for common reef-crest corals. Proceedings of the Eighth International Coral Reef Symposium, Panama, 1: 571-574.

Hall, V.R. and T.P. Hughes (1996). Reproductive strategies of modular organisms: comparative studies of reef-building corals. Ecology, 77: 950-963.

Hooper, J.N.A. (1996). Revision of the Microcionidae (Porifera: Poecilosclerida: Demospongiae), with description of Australian species. Memoirs of the Queensland Museum, 40: 1-626.

Karlson, R.H., T.P. Hughes and S.R. Karlson (1996). Density-dependent dynamics of soft coral aggregations: the significance of clonal growth and form. Ecology, 77(5): 1592-1599.

Kerrigan, B.A. (1996). Temporal patterns in size and condition at settlement in two tropical reef fishes (Pomacentridae: Pomacentrus amboinensis and P. nagasakiensis). Marine Ecology Progress Series, 135: 27-41.

Kleeman, K. (1996). Coral communities at Lizard Island, Great Barrier Reef, Australia. Beitrage zur Palaontologie, 21: 57-67.

Kornicker, L.S. (1996). Ostracoda (Myodocopina) from shallow waters of the Northern Territory and Queensland, Australia. Smithsonian Contributions to Zoology, 578: 1-97.

Leis, J.M., H.P.A. Sweatman and S.E. Reader (1996). What the pelagic stages of coral reef fishes are doing out in blue water: daytime field observations of larval behavioural capabilities. Marine and Freshwater Research, 47: 401-411.

McCormick, M.I. and B.A. Kerrigan, 1996. Predation and its influence on the condition of a newly settled tropical demersal fish. Marine and Freshwater Research, 47: 557-562.

Meischner, D. (1996). Sealevel oscillations and growth history of the Great Barrier Reef. In "Global and regional controls on biogenic sedimentation. I Reef evolution. Research reports." (Eds. J. Reitner, F. Neuwiiler and F. Gunkel). Goettinger Arb. Geol. Palaont., Sb2: 71-76.

Milton, D.A., G.C. Smith and S.J.M. Blaber (1996). Variable success in breeding of the roseate tern Sterna dougallii on the northern Great Barrier Reef. Emu, 96: 123-131.

Newman, L. and L.R.G. Cannon (1996). New genera of pseudocerotid flatworms (Platyhelminthes; Polycladida) from Australian and Papua New Guinean coral reefs. Journal of Natural History, 30: 1425-1441.

Newman, L.J. and L.R.G. Cannon (1996). Bulaceros, new genus, and Tytthosoceros, new genus, (Platyhelminthes: Polycladida) from the Great Barrier Reef, Australia and Papua New Guinea. Raffles Bulletin of Zoology, 44: 479-492.

Okaji, K., 1996. Feeding ecology in the early life stages of the crown-of-thorns starfish, Acanthaster planci (L.). PhD thesis, James Cook University.

Poulin, R. and A. Grutter (1996). Cleaning symbioses: proximate and adaptive explanations. BioScience 46: 512-517.

Purcell, S.W., 1996. A direct method for assessing sediment load in epilithic algal communities. Coral Reefs, 15: 211-213.

Reader, S.E., & J.M. Leis (1996). Larval development in the lutjanid subfamily Caesioninae (Pisces): the genera Caesio, Dipterygonotus and Pterocaesio. Bulletin of Marine Science, 59: 310-369.

Reitner, J. and P. Gautret (1996). Skeletal formation in the modern but ultraconservative chaetetid sponge Spirastrella (Acanthochaetetes) wellsi (Demospongiae, Porifera). Facies, 34: 193-208.

Reitner, J., G. Woerheide, V. Thiel and P. Gautret (1996). Reef caves and cryptic habitats of Indo-Pacific reefs - distribution patterns of coralline sponges and microbialites. In: "Global and regional controls on biogenic sedimentation. I. Reef evolution. Research Reports." (Eds. J. Reitner, F. Neuweiler and F. Gunkel.) Gottinger Arbeiten zur Geologie und Palaeontologie, Sb2: 91-100.

Robertson, D.R. (1996). Egg size in relation to fertilization dynamics in free-spawning tropical reef fishes. Oecologia, 108: 95-104.

Stump, R. (1996). An investigation to describe the population dynamics of Acanthaster planci (L.) around Lizard Island, Cairns Section, Great Barrier Reef Marine Park. CRC Reef Research Centre, Technical Report No. 10. Townsville: CRC Reef Research Centre, 56 pp.

Ten Hove, H.A and E. Nishi (1996). A redescription of the Indo-west Pacific Spirobranchus corrugatus Straughn, 1967 (Serpulidae, Polychaeta), and an alternative hypothesis on the nature of a group of middle Miocene microfossils from Poland. Beaufortia, 46: 83-96.

Thiel, V., J. Reitner and W. Michaelis (1996). Biogeochemistry of modern Porifera and microbialites from Lizard Island (Great Barrier Reef, Australia) and fossil analogues. In: "Global and regional controls on biogenic sedimentation. I. Reef evolution. Research reports." (Eds. J. Reitner, F. Neuweiler and F. Gunkel.) Gottinger Arbeiten zur Geologie und Palaeontology, Sb2: 129-132.

Whittington, I.D., 1996. Benedeniine capsalid monogeneans from Australian fishes: pathogenic species, site-specificity and camouflage. Journal of Helminthology, 70: 177-184.

Whittington, I.D. and M.A. Horton (1996). A revision of Neobedenia Yamaguti, 1963 (Monogenea: Capsalidae) including a redescription of N. melleni (MacCallum, 1927) Yamaguti, 1963. Journal of Natural History, 30: 1113-1156.

Woerheide, G., J. Reitner and P. Gautret (1996). Biocalcification processes in three coralline sponges from the Lizard Island section (Great Barrier Reef, Australia): the stromatoporoid Astrosclera, the chaetetid Spirastrella (Acanthochaetetes) and the sphinctozoid Vaceletia (Demospongiae). In: "Global and regional controls on biogenic sedimentation. I. Reef evolution. Research Reports." (Eds. J. Reitner, F. Neuweiler and F. Gunkel.) Gottinger Arbeiten zur Geologie und Palaeontologie, Sb2: 149-154.

Zeller, D.C. (1996). Patterns of movement of Plectropomus leopardus (Serranidae) in relation to spawning aggregations and marine protected areas, as determined by ultrasonic telemetry. PhD thesis, James Cook University, Australia.


LIRS publications in 1995: 38

Bellwood, D.R. (1995). Direct estimate of bioerosion by two parrotfish species, Chlorurus gibbus and C. sordidus, on the Great Barrier Reef, Australia. Marine Biology, 121: 419-429.

Bellwood, D.R. (1995). Carbonate transport and within-reef patterns of bioerosion and sediment release by parrotfishes (family Scaridae) on the Great Barrier Reef. Marine Ecology Progress Series, 117: 127-136.

Beukers, J.S., G.P. Jones and R.M. Buckley (1995). Use of implant microtags for studies on populations of small reef fish. Marine Ecology Progress Series, 125: 61-66.

Blaber, S.J.M., D.A. Milton, G.C. Smith and M.J. Farmer (1995). Trawl discards in the diet of tropical seabirds of the northern Great Barrier Reef. Marine Ecology Progress Series, 127: 1-13.

Braley, R.D. and F. Muir (1995). The case history of a large natural cohort of the giant clam Tridacna gigas (Fam. Tridacnidae) and the implications for re-stocking depauperate reefs with maricultured giant clams. Asian Fisheries Science, 8: 229-237.

Caley, M.J. (1995). Reef fish community structure and dynamics: in interaction between local and larger-scale processes? Marine Ecology Progress Series, 129: 19-29.

Caley, M.J. (1995). Community dynamics of tropical reef fishes: local patterns between latitudes.

Marine Ecology Progress Series, 129: 7-18.

Castro, P., D.G.B. Chia and P.K.L. Ng (1995). On the taxonomic status of Ceratocarcinus longimanus White, 1847 (Crustacea: Decapoda: Brachyura: Eumedonidae), a crab symbiotic with comatulid crinoids. Raffles Bulletin of Zoology, 43(1): 239-250.’

Clements, K.D. and J.H. Choat (1995). Fermentation in tropical marine herbivorous fishes.

Physiological Zoology, 68(3): 355-378.

Davies, C.R. (1995). Patterns of movement of three species of coral reef fish on the Great Barrier Reef. PhD thesis, James Cook University, Townsville.

Elliott, J.K., J.M. Elliott and R.N. Mariscal (1995). Host selection, location, and association behaviours of anemonefishes in field settlement experiments. Marine Biology, 122: 377-389.

Fainzilber, M., R. van der Schors, J.C. Lodder, K.W. Li, W.P.M. Garaerts and K.S. Kits (1995). New sodium channel-blocking conotoxins also affect calcium currents in Lymnaea neurons. Biochemistry, 34: 5364-5371.

Ferreira, B.P. (1995). Reproduction of the common coral trout Plectropomus leopardus (Serranidae: Epinephelinae) from the central and northern Great Barrier Reef, Australia. Bulletin of Marine Science, 56(2): 653-669.

Godwin, J. (1995). Phylogenetic and habitat influences on mating system structure in the humbug damselfishes (Dascyllus, Pomacentridae). Bulletin of Marine Science, 57(3): 637-652.

Grutter, A.S. (1995). Relationship between cleaning rates and ectoparasite loads in coral reef fishes. Marine Ecology Progress Series, 118: 51-58.

Grutter, A.S. (1995). Comparison of methods for sampling ectoparasites from coral reef fishes.

Marine and Freshwater Research, 46: 897-903.

Johnson, M.S. and R.L. Cumming (1995). Genetic distinctness of three widespread and morphologically variable species of Drupella (Gastropoda, Muricidae). Coral Reefs, 14: 71-78.

Kaly, U.L. (1995). Experimental test of the effects of methods of attachment and handling on the rapid transplantation of corals. CRC Reef Research Centre, Technical Report No. 1.
Townsville; CRC Reef Research Centre, 24 pp.

Keable, S.J. (1995). Structure of the marine invertebrate scavenging guild of a tropical reef ecosystem: field studies at Lizard Island, Queensland, Australia. Journal of Natural History, 29: 27-45.

Kerrigan, B.A. (1995). Variability in condition and morphological traits of two tropical reef fish (Pomacentridae): implications for recruitment success. PhD thesis, James Cook University.

Kleeman, K. (1995). Associations of coral and boring bivalves: Lizard Island (Great Barrier Reef, Australia) versus Safaga (N Red Sea). Beitrage zur Palaontologie, 20: 31-39.

Lange, A., T. Heinzeller and U. Welsch (1995). A myzostomid invading the connective tissue of its host Comanthus parvicirrus (Crinoidea). Pp 3-8 in "Echinoderm Research 1995", Smith & Campbell (eds). Balkema, Rotterdam.

Lange, A., T. Heinzeller and U. Welsch (1995). Carbohydrate-histochemistry on the ovary of Tropiometra afra (Echinodermata: Crinoidea). Pp 299-304 in "Echinoderm Research 1995", Smith & Campbell (eds). Balkema, Rotterdam.

Leis, J.M. and D.J. Bray (1995). Larval development in the lutjanid subfamily Paradicicthyinae (Pisces): the genera Symorphorus and Symphoricthys. Bulletin of Marine Science, 56(2): 418-433.

Liégeois, S. (1995). Influence de l'avifaune marine sur la végétation des îles coralliennes.

Licencié en Sciences Botaniques Thesis, Université Catholique de Louvain, Belgium.

Maida, M., P.W. Sammarco and J.C. Coll (1995). Effects of soft corals on scleractinian coral recruitment. I: Directional allelopathy and inhibition of settlement. Marine Ecology Progress Series, 121: 191-202.

McCormick, M.I. (1995). Fish feeding on mobile benthic invertebrates: influence of spatial variability in habitat associations. Marine Biology, 121: 627-637.

McCormick, M.I. and B.W. Molony (1995). Influence of water temperature during the larval stage on size, age and body condition of a tropical reef fish at settlement. Marine Ecology Progress Series, 118: 59-68.

Meekan, M.G., A.D.L. Steven and M.J. Fortin (1995). Spatial patterns in the distribution of damselfishes on a fringing coral reef. Coral Reefs, 14: 151-161.

Messing, C.G. (1995). Alloeocomatella, a new genus of reef-dwelling feather star from the tropical Indo-west Pacific (Echinodermata: Crinoidea: Comasteridae). Proceedings of the Biological Society of Washington, 108(3): 436-450.

Müller, R.-W. B. (1995). Rezente Corallinaceae in Riff-Hoehlen des Grossen Barriere-Riff Queensland, Australien. Diploma thesis, Institut für Geologie und Palaeontologie der Universität Stuttgart, Germany.

Pratchett, M.S. (1995). Spatial distribution, abundance and diet selection of butterflyfish (Pisces: Chaetodontidae). Honours thesis, James Cook University.

Reitner, J. and F. Neuweiler (1995). Mud mounds: a polygenetic spectrum of fine-grained carbonate buildups. Facies, 32: 1-70.

Reitner, J., P. Gautret, F. Marin and F. Neuweiler (1995). Automicrites in a modern marine microbialite. Formation model via organic matrices (Lizard Island, Great Barrier Reef, Australia).

Bulletin de l'Institut océanographique, Monaco, special number 14(2): 237-263.

Shashar, N., T.W. Cronin, G. Johnson & L.B. Wolff (1995). Portable imaging polarized light analyzer.

Proceedings of 9th Meeting on Optical Engineering in Israel. Society of Photo-Optical Instrumentation Engineers, Washington.

Shashar, N., T.W. Cronin, G. Johnson and L.B. Wolff (1995). Designs for submersible imaging polarimeters. In "Ultraviolet Radiation and Coral Reefs", Eds. D. Gulko and P.L. Jokiel. HIMB Technical Report 41.

Watson, S.L.S. (1995). Distribution, survivorship and growth of juvenile corals: the structural role of early post-recruitment processes. Honours thesis, James Cook University.

Wilson, D.T. (1995). The formation and ultrastructure of otolith settlement marks within a number of reef fish species. Honours thesis, James Cook University.


LIRS publications in 1994: 33

Bellwood, D.R. (1994). A phylogenetic study of the parrotfishes family Scaridae (Pisces: Labroidei), with a revision of genera. Records of the Australian Museum, Supplement 20: 1-86.

Bruce, N.L. (1994). The marine isopod Neocirolana Hale, 1925 (Crustacea, Cirolanidae) from tropical Australian waters. Memoirs of the Queensland Museum, 37(1): 41-51.

Bruce, N.L. (1994). Four new genera of marine isopod crustaceans (Sphaeromatidae) from eastern and souther Australia. Memoirs of the Museum of Victoria, 54(2): 399-438.

Cronin, T.W., N.J. Marshall and R.L Caldwell, 1994. The intrarhabdomal filters in the retinas of mantis shrimps. Vision Research, 34(3): 279-291.

Cronin, T.W., N.J. Marshalll, C.A. Quinn and C.A. King, 1994. Ultraviolet photoreception in mantis shrimp. Vision Research, 34 (11): 1443- 1452.

Dinsdale, E.A. (1994). Coral disease on the Great Barrier Reef. Absract only, p. 17 in "Joint Scientific conference on science, management and sustainability of marine habitats in the 21st century". Australian Institutte of Marine Science, Townsville, Australia.

Ferreira, B.P. and G.R. Russ (1994). Age validation and estimation of growth rate of the coral trout Plectropomus leopardus (Lacepede 1802) from Lizard Island, northern Great Barrier Reef. US National Marine Fisheries Service Fishery Bulletin, 92: 46-57.

Gladstone, W. (1994). Lek-like spawning, parental care and mating periodicity of the trigger-fish Pseudobalistes flavimarginatus (Balistidae). Environmental Biology of Fishes, 39: 249-257.

Green, A.L. (1994). The early life history of labroid fishes at Lizard Island, northern Great Barrier Reef. PhD thesis, James Cook University, Australia.

Grutter, A.S. (1994). Spatial and temporal variations of the ectoparasites of seven reef fish species from Lizard Island and Heron Island, Australia. Marine Ecology Progress Series, 115: 21-30.

Grutter, A.S. (1994). Parasites in the cleaning interactions between Labroides dimidiatus and fish. PhD thesis, James Cook University, Australia.

Hoese, D.F. and H.K. Larson (1994). Revision of the Indo-Pacific gobiid fish genus Valenciennea, with descriptions of seven new species. Indo-Pacific Fishes, 23: 1-71.

Kiene, W.E. & P.A. Hutchings (1994). Bioerosion experiments at Lizard Island, Great Barrier Reef. Coral Reefs, 13: 91-98.

Kikkawa, J. and A.L. Green (1994). Why are coral reefs and rainforests so diverse? In: Yasumo, M. and M.M. Watanabe (eds.), "Biodiversity: its complexity and role", pp. 227-265.

Leis, J.M. (1994). Coral Sea atoll lagoons: closed nurseries for the larvae of a few coral reef fishes. Bulletin of Marine Science, 54: 206-227.

Leis, J.M and K. Lee (1994). Larval development in the lutjanid subfamily Etelinae (Pisces): the genera Aphareus, Aprion, Etelis and Pristipomoides. Bulletin of Marine Science, 55(1): 46-125.

Mahon, J.L. (1994). Advantage of flexible juvenile coloration in two species of Labroides (Pisces: Labridae). Copeia, 1994(2): 520-524.

Maida, M, J.C. Coll and P.W. Sammarco (1994). Shedding new light on scleractinian coral recruitment. Journal of Experimental Marine Biology and Ecology, 180: 189-202.

McCormick, M.I. (1994). Variability in age and size at settlement of the tropical goatfish Upeneus tragula (Mullidae) in the northern Great Barrier Reef lagoon. Marine Ecology Progress Series, 103: 1-15.

McCormick, M.I. (1994). Comparison of field methods for measuring surface topography and their associations with a tropical reef fish assemblage. Marine Ecology Progress Series, 112: 87-96.

Milicich, M.J. and P.J. Doherty (1994). Larval supply of coral reef fish populations: magnitude and synchrony of replenishment to Lizard Island, Great Barrier Reef. Marine Ecology Progress Series, 110: 121-134.

Milicich, M.J. (1994). Dynamic coupling of reef fish replenishment and oceanographic processes. Marine Ecology Progress Series, 110: 135-144.

Musso, B. (1994). Internal bioerosion of in situ living and dead corals on the Great Barrier Reef. PhD thesis, James Cook University.

Nelson, V.M. (1994). Demographic processes and spatial heterogeneity in community structure and dynamics of corals on the reef crest. PhD thesis, James Cook University, Australia.

Patton, W.K. (1994). Distribution and ecology of animals associated with branching corals (Acropora spp.) from the Great Barrier Reef, Australia. Bulletin of Marine Science, 55(1): 193-211.

Pillai, T.G. and H.A. Ten Hove (1994). On recent species of Spiraserpula Regenhardt, 1961, a serpulid polychaete genus hitherto known only from Cretaceous and Tertiary fossils. Bulletin of the Natural History Museum, Zoology Series, 60(1): 39-104.

Shand, J. (1994). Changes in retinal structure during development and settlement of the goatfish Upeneus tragula. Brain, Behaviour and Evolution, 43: 51-60.

Smith, G.C. (1994). Seabird Islands no. 223: Nymph Island, Great Barrier Reef, Queensland. Corella, 18: 53-55.

Sorokin, Y.I. (1994). Role of plankton in the turnover of organic matter on the Great Barrier Reef, Australia. Hydrobiologia, 308: 35-44.

Speare, P. (1994). Relationships among black marlin, Makaira indica, in eastern Australian coastal waters, inferred from parasites. Australian Journal of Marine and Freshwater Research, 45: 535-549.

Stobutzki, I.C. and D.R. Bellwood (1994). An analysis of the sustained swimming abilities of pre- and post-settlement coral reef fishes. Journal of Experimental Marine Biology and Ecology, 175: 275-286.

Uthicke, S. (1994). Distribution patterns and growth of two reef flat holothurians, Holothuria atra and Stichopus chloronotus. Echinoderms through Time: Proceedings of the Eighth International Echinoderm Conference, Dijon, France, 1993. B. David, A. Guille, J.-P. Feral and M. Roux (Eds.)

Whittington, I.D., G.C. Kearn and M. Beverley-Burton (1994). Benedenia rohdei n. sp. (Monogenea: Capsalidae) from the gills of Lutjanus carponotatus (Perciformes: Lutjanidae)from the Great Barrier Reef, Queensland, Australia, with a description of the oncomiracidium. Systematic Parasitology, 28: 5-13.


LIRS publications in 1993: 29

Angert, E., K.D. Clements & N.R. Pace (1993). The largest bacterium. Nature, 362: 239-241.

Bray, R.A., T.H. Cribb and S.C. Barker (1993). Hemiuridae (Digenea) from marine fishes of the Great Barrier Reef, Queensland, Australia. Systematic Parasitology, 25: 37-62.

Choat J.H. & K.D. Clements (1993). Daily feeding rates in herbivorous labroid fishes. Marine Biology, 117: 205-211.

Choat, J.H., P.J. Doherty, B.A. Kerrigan & J.M. Leis (1993). A comparison of towed nets, purse seine, and light-aggregation devices for sampling larvae and pelagic juveniles of coral reef fishes. Fishery Bulletin, 91: 195-209.

Diele, K. (1993). Reproduktionsbiologische und okologische Freilandstudien and der Landkrabbe Cardisoma carnifex (Dekapoda, Brachyura, Gecarcinidae). Diploma thesis, Bayerische Julius-Maximilians-Universitat Wurzburg, Germany.

Dight, I.J. and W. Gladstone (1993). Torres Strait Baseline Study: Pilot study final report, June 1993. Trace metal concentrations in sediments and selected marine biota as indicator organisms and food items in the diet of Torres Strait Islanders and coastal Papuans. Great Barrier Reef Marine Park Authority Research Publication 29:

Erseus, C. (1993). The marine Tubificidae (Oligochaeta) of Rottnest Island, Western Australia. Pp. 331-390 in "Proceedings of the Fifth International Marine Biological Workshop: The Marine Flora and Fauna of Rottnest Island, Western Australia", F.E. Wells, D.I. Walker, H. Kirkman and R. Lethbridge (eds.). Western Australian Museum: Perth.

Ferreira, B.P. (1993). Age, growth, reproduction and population biology of Plectropomus spp (Epinephelinae: Serranidae) on the Great Barrier Reef, Australia. PhD thesis, James Cook University, Australia.

Grim, J.N. (1993). Description of somatic kineties and vestibular organization of Balantidium jocularum sp. n., and possible taxonomic implications for the class Litosomatea and the genus Balantidium. Acta Protozoologica, 32: 37-45.

Leis, J.M. (1993). Larval fish assemblages near Indo-Pacific coral reefs. Bulletin of Marine Science, 53(2): 362-392.

Leis, J.M., D.F. Hoese and T. Trnski (1993). Larval development in two genera of the Indo-Pacific gobiid fish family Xenisthmidae: Allomicrodesmus and Xenisthmus. Copeia, 1993(1): 186-196.

Lou, D.C. (1993). Growth in juvenile Scarus rivulatus and Ctenochaetus binotatus: a comparison of families Scaridae and Acanthuridae. Journal of Fish Biology, 42: 15-23.

Maida, M., A.R. Carroll and J.C. Coll (1993). Variability of terpene content in the soft coral Sinularia flexibilis (Coelenterata: Octocorallia), and its ecological implications. Journal of Chemical Ecology, 19: 2285-2296.

McCormick, M.I. (1993). Development and changes at settlement in the barbel structure of the reef fish, Upeneus tragula (Mullidae). Environmental Biology of Fishes, 37: 269-282.

McCormick, M.I. and B.W. Molony (1993). Quality of the reef fish Upeneus tragula (Mullidae) at settlement: is size a good indicator of condition? Marine Ecology Progress Series, 98: 45-54.

McCormick, M.I. and M.J. Milicich (1993). Late pelagic-stage goatfishes: distribution patterns and inferences on schooling behaviour. Journal of Experimental Marine Biology and Ecology, 174: 15-42.

Meekan, M.G., M.J. Milicich and P.J. Doherty (1993). Larval production drives temporal patterns of larval supply and recruitment of a coral reef damselfish. Marine Ecology Progress Series, 93: 217-225.

Musso, B.M. (1993). Effects of Acanthaster predation on bioerosion: design and preliminary results. Great Barrier Reef Marine Park Authority Workshop Series, 18: 133-144.

Olson, R.R., J.L. Cameron and C.M. Young (1993). Larval development (with observations on spawning) of the pencil urchin Phyllacanthus imperialis: a new intermediate larval form? Biological Bulletin, 185: 77-85.

Purcell, S.W. & D.R. Bellwood (1993). A functional analysis of food procurement in two surgeonfish species, Acanthurus nigrofuscus and Ctenochaetus striatus (Acanthuridae). Environmental Biology of Fishes, 37: 139-159

Reitner, J. (1993). Modern cryptic microbialite/metazoan facies from Lizard Island (GBR, Australia), formation and concepts. Facies, 29: 3-40.

Shand, J. (1993). Changes in the spectral absorption of cone visual pigments during the settlement of the goatfish Upeneus tragula: the loss of red sensitivity as a benthic existence begins. Journal of Comparative Physiology A, 173: 115-121.

Smith, G.C. (1993). Feeding and breeding of crested terns at a tropical locality - comparison with sympatric black-naped terns. Emu, 93: 65-70.

Smith, L. (1993). Asexual reproduction by fragmentation in corals: an experimental analysis. Honours thesis, James Cook University, Australia.

Uthicke, S. (1993). Untersuchungen zur Okologie sweier sedimentfressender Holothurien, Holothuria (Halodeima) atra (Jager, 1833) und Stichopus chloronotus (Brand, 1835), im Riffbereich um Lizard Island, Australien. Diploma thesis, Institut fur Hydrobiologie und Fischereiwissenschaft, Universitat Hamburg, Germany.

Webster, J. (1993). Siliclastic/carbonate interactions at Lizard Island in the northern Great Barrier Reef. Honours thesis, University of Sydney.

Westneat, M.W., 1993. Phylogenetic relationships of the tribe Cheilinini (Labridae: Perciformes). Bulletin of Marine Science, 52: 351-394.

Whittington, I.D. and G.C. Kearn (1993). A new species of skin-parasitic benedeniine monogenean with a preference for the pelvic fins of its host, Lutjanus carponotatus (Perciformes: Lutjanidae) fron the Great Barrier Reef. Journal of Natural History, 27: 1-14.


LIRS publications in 1992: 35

Bowden, B.F., J.C. Coll, L. Hongtu, R.C. Cambie, M.R. Kernan and P.R. Bergquist (1992). New cytotoxic scalarane sesterterpenes from the dictyoceratid sponge Strepsichordaia lendenfeldi. Journal of Natural Products, ?

Bruce, A.J. (1992). Two new species of Periclemenes (Crustaces, Decapoda, Palaemonidae) from Lizard Island, Queensland, with notes on some related taxa. Records of the Australian Museum, 44(1): 45-84.

Done, T. (1992). Constancy and change in some Great Barrier Reef coral communities: 1980-1990. American Zoologist, 32: 655-662.

Dufour, V. (1992). Colonisation des recifes coralliens par les larves de poissons. PhD thesis, Universite Pierre et Marie Curie, France.

Green A L (1992). Damselfish territories: focal sites for studies of the early life history of labroid fishes. Proceedings of the Seventh International Coral Reef Symposium Guam, pp. 601-605

Hall, V.R. (1992). Life-history strategies of common reef-crest corals at Lizard Island. Honours thesis, James Cook University, Australia.

Hay, M.E. (1992). The role of seaweed chemical defenses in the evolution of feeding specialization and in the mediation of complex interactions. Chapter 3 in "Ecological roles of marine natural products" (Valerie J. Paul, Ed.), Comstock Publishing Associates, Ithaca, NY, USA.

Healy, J. and K. Lamprell (1992). New species of Verenidae, Cardiidae, Crassatellidae, Tellinidae and Mactridae from Australia (Veneroida, Bivalvia, Mollusca). Journal of the Malacological Society of Australia, 13: 75-97.

Houbrick, R.S. (1992). Monograph of the genus Cerithium Brugiere in the Indo-Pacific (Cerithiidae: Prosobranchia). Smithsonian Contributions to Zoology, 510: 1-211.

Hutchings, P.A., W.E. Kiene, R.B. Cunningham and C. Donnelly (1992). Spatial and temporal patterns of non-colonial boring organisms (polychaetes, sipunculans and bivalve molluscs) in Porites at Lizard Island, Great Barrier Reef. Coral Reefs, 11: 23-31.

Keable, S.J. (1992). The scavenging, small marine invertebrates of Lizard Island, Queensland, Australia. MSc thesis, Macquarie University, Sydney.

Kiene, W.E. and P.A. Hutchings (1992). Long-term bioerosion of experimental coral substrates from Lizard Island, Great Barrier Reef. Proceedings of the Seventh International Coral Reef Symposium, Guam, 1: 397-403.

Leis, J.M. (1992). Summing up. In "Larval Biology", Proceedings number 15 of the Australian Society for Fish Biology Workshop. D.A. Hancock (Ed.). Australian Government Publishing Service, Canberra.

Lou, D.C. (1992). Validation of annual growth bands in the otolith of tropical parrotfishes (Scarus schlegeli Bleeker). Journal of Fish Biology, 41: 775-790.

Lou, D.C. & N. Moltschaniwskyj (1992). Daily otolith increments in juvenile tropical parrotfishes and surgeonfishes. Australian Journal of Marine and Freshwater Research, 43: 973-981.

Lou, D.C. (1992). Age specific patterns of growth and reproduction in tropical herbivorous fishes. PhD thesis, James Cook University, Australia.

Lowry, J.K. and H.E. Stoddart (1992). A revision of the genus Ichnopus (Crustacea: Amphipoda: Lyssianassoidea: Uristidae). Records of the Australian Museum, 44: 185-245.

McCormick, M.I. (1992). The influence of pelagic life history on the quality of tropical goatfish (family Mullidae) at settlement. PhD thesis, James Cook University, Australia.

McCormick, M.I. and B.W. Molony (1992). Effects of feeding history on the growth charactersistics of a reef fish at settlement. Marine Biology, 114: 165-173.

McCormick, M.I. and J. Shand (1992). Metamorphosis of the visual and barbel sensory systems at settlement in the reef fish Upeneus tragula (Family Mullidae). Proceedings of the Seventh International Coral Reef Symposium, Guam, 1: 616-623.

Meekan, M.G. (1992). The influence of pre- and post-settlement processes on the population dynamics of coral reef damselfishes. PhD thesis, Griffith University.

Meekan M.G. (1992). Limitations to the back-calculation of recruitment patterns from otoliths. Proceedings of the Seventh International Coral Reef Symposium, Guam, 1: 624-628.

Milicich, M.J., 1992. Light traps: a novel technique for monitoring larval supply and replenishment of coral reef fish populations. PhD thesis, Griffith University.

Milicich, M.J., M.G. Meekan and P.J. Doherty (1992). Larval supply: a good predictor of recruitment of three species of reef fish (Pomacentridae). Marine Ecology Progress Series, 86: 153-166.

Mills, R.A. (1992). Aboriginal occupation of Lizard Island. Master of Letters in Cultural Management thesis, University of Sydney.

Musso, B.M. (1992). Rates of skeletal degradation following death in three species of Acropora. Proceedings of the Seventh International Coral Reef Symposium, Guam, 1: 413-418.

Nelson, V.M. (1992). Patterns of cover, diversity and spatial arrangement of benthos at Lizard Island, Great Barrier Reef. Proceedings of the Seventh International Coral Reef Symposium, Guam, 2: 827-832.

Ponder, W.F. and R. de Keyzer (1992). A revision of the genus Diala (Gastropoda: Cerithioidea: Dialidae). Invertebrate Taxonomy, 6: 1019-75.

Reitner, J. (1992). Coralline sponges: an attempt of a phylogenetic analysis. Berliner Geowissenschaftliche Abhandlungen, Reihe E (Palaobiologie), Band 1:1-352 + figures.

Russell, D. (1992). Barrier Protection. ALR, 145: 21-25.

Smith, G.C. (1992). Observations of crested terns with an experimentally added egg in the nest. Corella, 16(2): 38.

Sorokin, Y.I. (1992). To the characteristics of plankton in the waters of the Great Barrier Reef, Australia. [Russian journal - in Russian]

Stafford-Smith, M.C. and R.F.G. Ormond (1992). Sediment rejection mechanisms of 42 species of Australian scleractinian corals. Australian Journal of Marine and Freshwater Research, 43(4):

Stafford-Smith, M.G. (1992). Mortality of the hard coral Leptoria phrygia under persistent sediment influx. Proceedings of the Seventh International Coral Reef Symposium, Guam, 1: 289-299.

Van Woesik, R., A.M. Ayling, and B. Mapstone (1992). Impact of tropical cyclone 'Ivor' on the Great Barrier Reef, Australia. Journal of Coastal Research, 7(2): 551-558.


LIRS publications in 1991: 23

Behrens, P. (1991). Ostracoda (Crustacea) from Lizard Island, northern Great Barrier Reef, Australia. II. The family Paradoxostomatidae Brady and Norman, 1889. Helgolander Meeresuntersuchungen, 45: 143-163.

Behrens, P. (1991). Ostracoda (Crustacea) from Lizard Island, norhtern Great Barrier Reef, Australia. I. Families: Cytherellidae, Loxoconchidae, Cytherideidae, Cytheruridae, Paracytherideidae, Pectocytheridae, Krithidae, Cytheromatiidae, Bythocytheridae, Cytheridae. Helgolander Meeresuntersuchungen, 45: 107-142.

Caley, M.J. (1991). Mechanisms of coexistence in communities of coral-reef fishes. PhD thesis. University of Sydney.

Clements, K.D. (1991). Gut microorganisms of surgeonfishes (Family Acanthuridae). PhD thesis, James Cook University, Australia.

Clements, K.D. and S. Bullivant (1991). An unusual symbiont from the gut of surgeonfishes may be the largest known prokaryote. Journal of Bacteriology, 173(17): 5359-5362.

Dauer, D.M. and R.M. Ewing (1991). Functional morphology and feeding behaviour of Malacoceros indicus (Polychaeta: Spionidae). Bulletin of Marine Science, 48(2): 395-400.

Dingerkus, G. (1991). Sharks on the Great Barrier Reef. Tropical Fish Hobbyist, 40: 52-76.

Grygier, M.J. (1991). Additions to the ascothoracidan fauna of Australia and south-east Asia (Crustacea, Maxilloopoda): Synagogidae (part), Lauridae and Petrarcidae. Records of the Australian Museum, 43: 1-46.

Harris, P.T., E.K. Baker, A.R. Cole and J.B. Keene (1991). Final report: sandwave movement, currents and sedimentation in Torres Strait. Ocean Sciences Institute Report No. 47, 1-113. University of Sydney, Sydney.

Hoggett, A.K. (1991). The genus Macrophiothrix (Ophiuroidea: Ophitrichidae) in Australian waters. Invertebrate Taxonomy, 4: 1077-146.

Holland, N.D., A.B. Leonard and D.L. Meyer (1991). Digestive mechanics and gluttonous feeding in the feather star Oligometra serripinna (Echinodermata: Crinoidea. Marine Biology, 111: 113-119.

Hutchings, P. and A. Reid (1991). The Nereididae (Polychaeta) from Australia - Leonnates, Platynereis and Solomononereis. Records of the Australian Museum, 43: 47-62.

Hutchings, P., A. Reid and R. Wilson (1991). Perinereis (Polychaeta, Nereididae) from Australia, with redescriptions of six additional species. Records of the Australian Museum, 43: 241-274.

Johnson, C.R., D.C. Sutton, R.R. Olson and R. Giddins (1991). Settlement of crown-of-thorns starfish: role of bacteria on surfaces of coralline algae and a hypothesis for deepwater recruitment. Marine Ecology Progress Series, 71: 143-162.

Kohlmeyer, J. and B. Volkmann-Kohlmeyer (1991). Marine fungi of Queensland, Australia. Australian Journal of Marine and Freshwater Research, 42: 91-99.

Leis, J.M. (1991). The pelagic stage of reef fishes: the larval biology of coral reef fishes. In "The Ecology of Fishes of Coral Reefs" (Ed. P. Sale), Academic Press, San Diego.

Leis, J.M. (1991). Vertical distribution of fish larvae in the Great Barrier Reef lagoon, Australia. Marine Biology, 109: 157-166.

Mills, R. (1991). Evidence of aboriginal occupation on Lizard Island, North Queensland. Report of an Archaeological Survey to Qld. National Parks, 61 pp.

Perkins, T.H. (1991). Calcisabella piloseta, a new genus and species of Sabellinae (Polychaeta: Sabellidae). Bulletin of Marine Science, 48(2): 261-267.

Rudman, W.B. (1991). Further studies on the taxonomy and biology of the octocoral-feeding genus Phyllodesmium Ehrenberg, 1831 (Nudibranchia, Aeolidoidea). Journal of Molluscan Studies, 57: 167-203.

Smith, G.C. (1991). The roseate tern Sterna dougallii gracilis breeding on the northern Great Barrier Reef, Queensland. Corella, 15(2): 33-36.

Smith, G.C. (1991). Kleptoparasitic silver gulls Larus novaehollandiae on the northern Great Barrier Reef, Queensland. Corella, 15(2): 41-44.

Thomas, J.D. and J.L. Barnard (1991). Guernea ipilya and G. yamminye, new species (Crustacea: Amphipoda: Dexaminidae) from the Great Barrier Reef, Australia. Memoirs of the Museum of Victoria, 52(2): 299-310.


LIRS publications in 1990: 20

Bellwood, D.R. and J.H. Choat (1990). A functional analysis of grazing in parrotfishes (family Scaridae): the ecological implications. Environmental Biology of Fishes, 28: 189-214.

Brown, A.L. (1990). Measuring the effect of aircraft noise on seabirds. Environment International, 16: 587-592.

Child, C.A. (1990). Pycnogonida of the western Pacific Islands, VIII. Recent collections from islands of the Great Barrier Reef, Australia. Proceedings of the Biological Society, Washington, 103(2): 311-335.

Chisholm, J.R.M., J.-C. Collingwood and E.F. Gill (1990). A novel in situ respirometer for investigating photosynthesis and calcification in crustose coralline algae. Journal of Experimental Marine Biology and Ecology, 141: 15-29.

Dojiri, M. and M.J. Grygier (1990). Pionomolgus gallicolus, gen. et sp. nov. (Poecilostomatoida: Lichomollgidae), a gall-inducing copepod of a scleractinian coral from Australia. Australian Journal of Zoology, 37: 695-703.

Duffy, J.E. and M.E. Hay (1990). Seaweed adaptations to herbivory. BioScience, 40(5): 368-375.

Gates, J. and P. Hoyle (1990). Lore from the Lizard: Lizard Island Research Station. Australian Natural History, 23(4): 314-321.

Goggin, C.L. and R.J.G. Lester (1990). Rickettsiales-like infection in the gills of Tridacna crocea from the Great Barrier Reef. Journal of Invertebrate Pathology, 56: 135-138.

Grygier, M.J. (1990). Distribution of Indo-Pacific Myzostoma and host specificity of comatulid-associated Myzostomida. Bulletin of Marine Science, 47(1): 182-191.

Hoggett, A.K. (1990). Taxonomy and systematic position of the brittlestar genus Macrophiothrix H.L. Clark (Echinodermata: Ophiuroidea). PhD thesis, University of Queensland.

Newman, L.J. (1990). The taxonomy, distribution and biology of Atlanta gaudichaudi Souleyet, 1852 (Gastropoda, Heteropoda) from the Great Barrier Reef, Australia. American Malacological Bulletin, 8(1): 85-94.

Quinn, N.J. and B.L. Kojis (1990). Are divers destroying the Great Barrier Reef's Cod Hole? In "Diving for Science 1990", Proceedings of the American Academy of Underwater Sciences 10th Annual Scientific Diving. Symposium, pp 303-309.

Roussis, V., J.R. Pawlik, M.E. Hay and W. Fenical (1990). Secondary metabolites of the chemically rich ascoglossan Cyerce nigricans. Experientia, 46: 327-329.

Rudman, W.B. (1990). The Chromodorididae (Opisthobranchia: Mollusca) of the Indo-west Pacific: further species of Glossodoris, Thorunna and the Chromodoris aureomarginata colour group. Zoological Journal of the Linnean Society, 100: 263-326.

Smith, G.C. (1990). Factors influencing egg laying and feeding in black-naped terns Sterna sumatrana. Emu, 90: 88-96.

Sweatman, H.P.A. and J. St. John (1990). Effects of selective settlement and of aggression by residents on distribution of young recruits of two tropical damselfishes. Marine Biology, 105: 247-252.

Thomas, J.D. and J.L. Barnard (1990). Jerbarnia stocki, a new species from the Barrier Reef (Crustacea, Amphipoda. Beaufortia, 41: 169-176.

Thorrold, S.R. and M.J. Milicich (1990). Comparison of larval duration and pre- and post-settlement growth in two species of damselfish, Chromis atripectoralis and Pomacentrus coelestis (Pisces: Pomacentridae), from the Great Barrier Reef. Marine Biology, 105: 375-384.

Vail, L.L. (1990). Bathymetric distribution and behaviour of two sympatric species of Oligometra (Echinodermata: Crinoidea) at Lizard Island, Great Barrier Reef. Australian Journal of Marine and Freshwater Research, 41: 551-5.

Van Der Spoel, S. and L. Newman (1990). Juveniles of the pteropod Hyalocylis striata (Gastropoda, Pteropoda). Basteria, 54: 203-210.


LIRS publications in 1989: 17

Alder, J. and R. Braley (1989). Serious mortality in populations of giant clams on reefs surrounding Lizard Island, Great Barrier Reef. Australian Journal of Marine and Freshwater Research, 40: 205-213.

Bellwood, D.R. and J.H. Choat (1989). A description of the juvenile phase colour patterns of 24 parrotfish species (Family Scaridae) from the Great Barrier Reef, Australia. Records of the Australian Museum, 41: 1-41.

Ben-Eliahu, M.N. & H. Ten Hove (1989). Redescription of Rhodopsis pusilla Bush, a little known but widely distributed species of Serpulidae (Polychaeta). Zoologica Scripta, 18: 381-395.

Clements, K.D., D.C. Sutton and J.H. Choat (1989). Occurrence and characteristics of unusual protistan symbionts from surgeonfishes (Acanthuridae) of the Great Barrier Reef, Australia. Marine Biology, 102: 403-412.

Fork, D.C. and A.W.D. Larkum (1989). Light harvesting in the green alga Ostreobium sp., a coral symbiont adapted to extreme shade. Marine Biology, 103: 381-385.

Goggin, C.L., K.B. Sewell and R.J.G. Lester (1989). Cross-infection experiments with Australian Perkinsus species. Diseases of Aquatic Organisms, 7: 55-59.

Grygier, M.J. (1989). Three new species of Myzostoma (Myzostomida). Proceedings of the Biological Society of Washington, 102(3): 793-804.

Hay, M.E., J.R. Pawlik, J.E. Duffy and W. Fenical (1989). Seaweed-herbivore-predator interactions: host-plant specialization reduces predation on small herbivores. Oecologia, 81: 418-427.

Hoegh-Guldberg, O. & G.J. Smith (1989). The effect of sudden changes in temperature, light and salinity on the population density and export of zooxanthellae from the reef corals Stylophora pistillata Esper and Seriatopora hystrix Dana. Journal of Experimental Marine Biology and Ecology, 129: 279-303.

Hoegh-Gulgberg, O. & G.J. Smith (1989). Influence of the population density of zooxanthellae and supply of ammonium on the biomass and metabolic charactersitics of the reef corals Seriatopora hystrix and Stylophora pistillata. Marine Ecology Progress Series, 57: 173-186.

Leis, J.M. (1989). Larval biology of butterflyfishes (Pisces, Chaetodontidae): what do we really know? Environmental Biology of Fishes, 25: 87-100.

Leis, J.M. and T. Trnski (1989). The larvae of Indo Pacific shore fishes. University of NSW Press, Sydney.

Leis, J.M., B. Goldman and S.E. Reader (1989). Epibenthic fish larvae in the Great Barrier Reef Lagoon near Lizard Island, Australia. Japanese Journal of Ichthyology, 35(4): 428-433.

Smith, G.C. (1989). The feeding and breeding relationships of black-naped (Sterna sumatrana Raffles) and crested (Sterna bergii Lichenstein) terns in a tropical reef environment. PhD thesis, Griffith University, Brisbane.

Smith, G.C. and P. Ogilvy (1989). Rocky Islets, Great Barrier Reef, Queensland. Corella, 13(4): 107-109.

Stroud, G.J., B. Goldman and W. Gladstone (1989). Larval development, growth and age determination in the sharpnose pufferfish Canthigaster valentini (Teleostei: Tetraodontidae). Japanese Journal of Icthyology, 36(3): 327-337.

Vail, L.L. (1989). Arm growth and regeneration in Oligometra serripinna (Carpenter) (Echinodermata: Crinoidea) at Lizard Island, Great Barrier Reef. Journal of Experimental Marine Biology and Ecology, 130: 189-204.


LIRS publications in 1988: 41

Alder, J. & R.D. Braley (1988). Mass mortalities of giant clams on the Great Barrier Reef (abstract only). ACIAR Monograph Series, 9: 230.

Bellwood D R (1988). Ontogenetic changes in the diet of early post-settlement Scarus species (Pisces: Scaridae). Journal of Fish Biology, 33: 213-219.

Braley, R.D. (1988). Recruitment of the giant clams Tridacna gigas and T. derasa at four sites on the Great Barrier Reef. Pp. 73-77 in Giant clams in Asia and the Pacific, J.W. Copeland and J.S. Lucas (eds.), Australian Centre for International Agricultural Research, Canberra: Australia.

Bruce, A.J., 1988. Further records of the hymenocerine shrimp Phyllognatia simplex Fujino (Crustacea: Decapoda). The Beagle, 5: 101-104.

Buckley, R. (1988). Plant succession under repeated disturbance: establishment and growth of strandline forbs and creepers on unstable beaches in the wet tropics. Proceedings of the Ecological Society of Australia, 15: 307-311.

Chisholm, J.R.M. (1988). Photosynthesis, calcification and photoadaptation in reef-building crustose coralline algae on the Great Barrier Reef. PhD thesis, James Cook University.

Clements, K.D. and D.R. Bellwood (1988). A comparison of the feeding mechanisms of two herbivorous labroid fishes, the temperate Odax pullus and the tropical Scarus rubroviolaceus. Australian Journal of Marine and Freshwater Research, 39: 87-107.

Crawford, C.M., R.D. Braley and W.J. Nash (1988). Interspecific growth rates of cultured giant clams on the Great Barrier Reef.Pp. 193-196 in Giant Clams in Asia and the Pacific, ACIAR Monograph Series, vol 98.

Gladstone, W. (1988). A spine-bending story. Australian Natural History, 22(7): 303-305.

Gladstone, W. (1988). Killer whale feeding observed underwater. Journal of Mammalogy, 69(3): 629-630.

Gladstone, W. (1988). Correlates and possible costs of reproductive success in males of a haremic coral reef fish. Proceedings of the Sixth International Coral Reef Symposium, Australia, 2: 693-698.

Gladstone, W. and M. Westoby (1988). Growth and reproduction in Canthigaster valentini (Pisces, Tetraodontidae): a comparison of a toxic reef fish with other reef fishes. Environmental Biology of Fishes, 21(3): 207-221.

Hay, M.E., J.E. Duffy and W. Fenical (1988). Seaweed chemical defences: among-compound and among-herbivore variance. Proceedings of the Sixth International Coral Reef Symposium, Australia, 3: 43-48.

Hoegh-Guldberg, O. (1988). A method determining the surface area of corals. Coral Reefs, 7: 113-116.

Hoese, D.F. and Y. Obika, 1988. A new gobiid fish, Fusigobius signipinnis, from the western tropical Pacific. Japanese Journal of Ichthyology, 35(3): 282-288.

Hulsman, K. and G.C. Smith (1988). Biology and growth of the black naped tern Sterna sumatrana: an hypothesis to explain the relative growth rates of inshore, offshore and pelagic feeders. Emu, 88: 234-242.

Hutchings, P. and L. Howitt (1988). Swarming of polychaetes on Great Barrier Reef. Proceedings of the Sixth International Coral Reef Symposium, Australia, 2: 739-744.

Hutchings, P. and M. Peyrot-Clausade (1988). Macro-boring communites of Porites - a biogeographical comparison. Proceedings of the Sixth International Coral Reef Symposium, Australia, 3: 263-268.

Hutchings, P.A. and C. Glasby (1988). The Amphitritinae (Polychaeta: Terebellidae) from Australia. Records of the Australian Museum, 40: 1-60.

Larkum, A.W.D., G.C. Cox and T.P. Dibbayawan (1988). Prokoryotic algal symbionts of coral reef sponges. Proceedings of the Sixth International Coral Reef Symposium, Australia, 3: 163-170.

Leonard, A.B., J.R. Strickler and N.D. Holland (1988). Effects of current speed on filtration during suspension feeding in Oligometra serripinna (Echinodermata: Crinoidea). Marine Biology, 97: 111-125.

Lowry, J.K. and H.E. Stoddart (1988). The Wandinidae, a new Indo-Pacific family of lysianassoid Amphipoda (Crustacea). Records of the Australian Museum, 42: 159-171.

Meekan, M.G. (1988). Patterns of settlement and mortality of juvenile reef fishes at Lizard Island, norhtern Great Barrier Reef. Proceedings of the Sixth International Coral Reef Symposium, Australia, 2: 779-784.

Milicich, M.J. (1988). The distribution and abundance of presettlement fish in the nearshore waters of Lizard Island. Proceedings of the Sixth International Coral Reef Symposium, Australia, 2: 785-790.

Nash, W.J., M. Goddard and J.S. Lucas (1988). Population genetic studies of the crown of thorns starfish, Acanthaster planci (L.), in the Great Barrier Reef region. Coral Reefs, 7: 11-18.

Newman, L.J. (1988). Holoplanktonic gastropods from Great Barrier Reef waters, Australia. Hawaiian Shell News, Vol. ?: 5.

Newman, L.J. and J.G. Greenwood (1988). A new species of gymnosome, Pneumodermopsis spoeli (Gastropoda: Opisthobranchia), from the Great Barrier Reef, Australia. The Veliger, 31(1/2): 75-59.

Olson, R.R., R. McPherson and K. Osborne (1988). In situ larval culture of the crown of thorns starfish, Acanthaster planci (L): Effect of chamber size and flushing on larval settlement and morphology. Proceedings of the Sixth International Echinoderm Conference, Victoria, pp. 247-251.

Page, A.J. and R.C. Willan (1988). Ontogenetic change in the radula of the gastropod Epitonium billeeana (Prosobranchia: Epitoniidae). The Veliger, 30(3): 222-229.

Pitcher, C.R. (1988). Spatial variation in the temporal pattern of recruitment of a coral reef damselfish. Proceedings of the Sixth International Coral Reef Symposium, Australia, 2: 811-816.

Poore, G.C.B. and H.M. Lew Ton (1988). Amakusanthura and Apanthura (Crustacea: Isopoda: Anthuridae) with new species from tropical Australia. Memoirs of the Museum of Victoria, 49(1): 107-147.

Poore, G.C.B. and H.M. Lew Ton (1988). A generic review of the Hyssuridae (Crustacea: Isopoda) with a new genus and new species from Australia. Memoirs of the Museum of Victoria, 49(1): 169-193.

Poore, G.C.B. and H.M. Lew Ton (1988). Antheluridae, a new family of Crustacea (Isopoda: Anthuridea) with new species from Australia. Journal of Natural History, 22: 489-506.

Roper, C.F. and F.G. Hochberg (1988). Behavior and systematics of cephalopods from Lizard Island, Australia, based on color and body patterns. Malacologia, 29(1): 153-193.

Schwarz, A.L. (1988). Sex change and its potential significance in Dascyllus reticulatus (Pisces, Pomacentridae). Second International Conference of the Society for Behavioral Ecology, 6 October 1988.

Stock, J.H. (1988). A bizarre parasitic copepod (nereicoliform Poecilostomatoida) from the Great Barrier Reef. Tropical Zoology, 1: 217-222.

Sutton, D.C. and K.D. Clements (1988). Aerobic heterotrophic gastrointestinal microflora of tropical marine fishes. Proceedings of the Sixth International Coral Reef Symposium, Australia, 3: 185-190.

Sutton, D.C., L. Trott, J.L. Reichelt and J.S. Lucas (1988). Assessment of bacterial pathogenesis in crown of thorns starfish Acanthaster planci (L). Proceedings of the Sixth International Coral Reef Symposium, Australia, 2: 171-176.

Sweatman, H. (1988). Field evidence that settling coral reef fish larvae detect resident fishes using dissolved chemical cues. Journal of Experimental Marine Biology and Ecology, 124: 163-174.

Vail, L.L. (1988). Reproductive strategies, population structure, and resource partitioning in comatulid crinoids at Lizard Island. PhD thesis, James Cook University, Townsville.

Vail, L.L. (1988). Distribution patterns and population structure of Oligometra serripinna (Echinodermata: Crinoidea) at Lizard Island, Great Barrier Reef. Proceedings of the Sixth International Echinoderm Conference, Victoria, pp. 457-466.


LIRS publications in 1987: 30

Baccaert, J. (1987). Distribution patterns and taxonomy of benthic foraminifera in the Lizard Island reef complex, northern Great Barrier Reef, Australia. Vol. 1: Distribution patterns, 146 pp + plates; Vol. 2: Taxonomy, 290 pp; Vol. 3: Atlas of foraminifera, 225 pp, 109 pl. PhD thesis, Université de Liege, Belgium.

Braley, R.D. (1987). Report on a giant clam recruitment mapping survey at Lizard Island. Report to Great Barrier Reef Marine Park Authority.

Braley, R.D. (1987). Reproduction and recruitment of giant clams and some aspects of their larval and juvenile biology. PhD thesis, University of New South Wales, Sydney.

Braley, R.D. (1987). Spatial distribution and population parameters of Tridacna gigas and T. derasa. Micronesica, 20: 225-246.

Braley, R.D. (1987). Distribution and abundance of the giant clams Tridacna gigas and T. derasa on the Great Barrier Reef. Micronesica, 20: 215-223.

Bruce, N.L. (1987). Australian Renocila Miers, 1880 (Isopoda: Cymothoidae), crustacean parasites of marine fishes. Records of the Australian Museum, 39: 169-182.

Doherty, P.J. (1987). Light traps - selective but useful devices for quantifying the distributions and abundances of larval fishes. Bulletin of Marine Science, 41: 423-431.

Donaldson, T.J. (1987). Social organization and reproductive behavior of the hawkfish Cirrhiticthys falco (Cirrhitidae). Bulletin of Marine Science, 41(2): 531-540.

Gladstone, W. (1987). The eggs and larvae of the sharpnose pufferfish Canthigaster valentini (Pisces: Tetraodontidae) are unpalatable to other reef fish. Copeia, 1987(1): 227-230.

Gladstone, W. (1987). The courtship and spawning behaviors of Canthigaster valentini (Tetraodontidae). Environmental Biology of Fishes, 20(4): 255-261.

Gladstone, W. (1987). Role of female territoriality in social and mating systems of Canthigaster valentini (Pisces: Tetraodontidae): evidence from field experiments. Marine Biology, 96: 185-191.

Goggin, C.L. and R.J.G. Lester (1987). Occurrence of Perkinsus species (Protozoa, Apicomplexa) in bivalves from the Great Barrier Reef. Diseases of Aquatic Organisms, 3: 113-117.

Hall, S.J. (1987). New species of Sarsiella and Anscottiella (Ostracoda: Myodocopina) from Lizard Island, North Queensland. Journal of Crustacean Biology, 7(4): 738-763.

Hemsley, A.C. (1987). An investigation of Conus toxin precursor genes. Honours thesis, University of Sydney.

Holland, N.D., A.B. Leonard and J.R. Strickler (1987). Upstream and downstream capture during suspension feeding by Oligometra serripinna (Echinodermata: Crinoidea) under surge conditions. Biological Bulletin, 173: 552-556.

Hutchings, P.A. and C. Glasby (1987). The Thelepinae (Terebellidae) from Australia, with a discussion of the generic and specific characters of the subfamily. Bulletin of the Biolgical Society of Washington, 7: 217-250.

Leis, J.M. and B. Goldman (1987). Composition and distribution of larval fish assemblages in the Great Barrier Reef Lagoon, near Lizard Island, Australia. Australian Journal of Marine and Freshwater Research, 38: 211-23.

Leis, J.M., B. Goldman and S. Ueyanagi (1987). Distribution and abundance of billfish larvae (Pisces: Istiophoridae) in the Great Barrier Reef Lagoon and Coral Sea near Lizard Island, Australia. Fishery Bulletin, 85(4): 757-765.

Newman, L.J. (1987). Swarms of sea-butterflies. Hawaiian Shell News, Vol. ?: 3.

Page, A.J. (1987). The feeding behaviour and biology of selected corallivorous, prosobranch gastropods from the east coast of Australia. MSc thesis, University of Queensland, Brisbane.

Rennis, D.S. and D.F. Hoese, 1987. Aioliops, a new genus of ptereleotrine fish (Pisces: Gobioidei) from the tropical Indo-Pacific with descriptions of four new species. Records of the Australian Museum, 39(1): 67-84.

Roper, C.F.E. and F.G. Hochberg (1987). Cephalopods of Lizard Island, Great Barrier Reef, Australia. Occasional Papers from the Museum of Victoria, 3: 15-20.

Saunders, W.B and P.D. Ward (1987). Ecology, distribution and population charactersitics of Nautilus. Chapter 9 in "Nautilus" (W.B. Saunders and N.H. Landman, Eds.), Plenum Publishing Corp.

Saunders, W.B. (1987). The species of Nautilus. Chapter 3 in "Nautilus" (W.B. Saunders and N.H. Landman Eds.), Plenum Publishing Corp.

Saunders, W.B. and P.D. Ward (1987). Sympatric occurrence of living Nautilis, (N. pompilus and N. stenomphalus) on the Great Barrier Reef, Australia. The Nautilus, 101(4): 188-193.

Smith, G.C. (1987). The birds of Eagle Island, a tropical sand cay on the northern Great Barrier Reef, Australia. The Sunbird, 17(1): 1-11.

Vail, L.L. (1987). Diel patterns of emergence of crinoids (Echinodermata) from with a reef at Lizard Island, Great Barrier Reef, Australia. Marine Biology, 93: 551-560.

Vail, L.L. (1987). Reproduction in five species of crinoids at Lizard Island, Great Barrier Reef. Marine Biology, 95: 431-446.

Wells, M.J. (1987). Oxygen uptake and the effect of feeding in Nautilus. The Veliger, 30(1): 69-75.

Woodruff, D.S., M.P. Carpenter, W.B. Saunders and P.D. Ward (1987). Genetic variation and phylogeny in Nautilus. Chapter 5 in "Nautilus" (W.B. Saunders and N.H. Landman, Eds.), Plenum Publishing Corp.


LIRS publications in 1986: 32

Aldenhoven, J.M. (1986). Different reproductive strategies in a sex-changing coral reef fish Centropyge bicolor (Pomacanthidae). Australian Journal of Marine and Freshwater Research, 37: 353-60.

Aldenhoven, J.M. (1986). Local variation in mortality rates and life-expectancy estimates of the coral-reef fish Centropyge bicolor (Pisces: Pomacanthidae) Marine Biology, 92: 237-244.

Babcock, R.C., G.D. Bull, P.L. Harrison, A.J. Heyward, J.K. Oliver, C.C. Wallace and B.L. Willis (1986). Synchronous spawnings of 105 scleractinian coral species on the Great Barrier Reef. Marine Biology, 90: 379-394.

Baccaert, J. (1986). Foraminiferal bio- and thanatocoenoses of reef flats, Lizard Island, Great Barrier Reef, Australia. Nature of substrate. Annls Soc. r. zool. Belg., 116: 3-14.

Boon, P.I. (1986). Uptake and release of nitrogen compounds in coral reef and seagrass, Thallassia hemprichii (Ehrenb.) Aschers, bed sediments at Lizard Island, Queensland. Australian Journal of Marine and Freshwater Research, 37: 11-19.

Bruce, N.L. (1986). Cirolanidae (Crustacea: Isopoda) of Australia. Records of the Australian Museum, 6: 239pp.

Bruce, N.L. (1986). Australian Pleopodias Richardson, 1910, and Anilocra Leach, 1818 (Isopoda: Cymothoidae), crustacean parasites of marine fishes. Records of the Australian Museum, 39: 85-130.

Buckley, R.C. and S.B. Knedlhans (1986). Beachcomber biogeography: interception of dispersing propagules by islands. Journal of Biogeography, 13: 69-70.

Cannon, L.R.G. and H. Silver (1986). Sea Cucumbers of Northern Australia Queensland Museum, Brisbane.
Coates, M., D.W. Connell, J. Bodero, G.J. Miller and R. Back (1986). Aliphatic hydrocarbons in Great Barrier Reef organisms and environment. Estuarine, Coastal and Shelf Science, 23: 99-113.

Coates, M., D.W. Connell, J. Bodero, G.J. Miller and R. Back (1986). Aliphatic hydrocarbons in Great Barrier Reef organisms and environment. Estuarine, Coastal and Shelf Science, 23: 99-113.

Cox, G. (1986). Comparison of Prochloron from different hosts, I. Structural and ultrastructural characteristics. New Phytol., 104: 429-445.

Cox, G. (1986). The origins of chloroplasts in eukaryotes. Nature, 322: 412.

Denton, G.R.W. and C. Burdon-Jones (1986). Trace metals in algae from the Great Barrier Reef. Marine Pollution Bulletin, 17(3): 98-107.

Duckworth, B.G. and J. McLean (1986). Notes on a collection of butterflies from the islands of the Great Barrier Reef. Australian Entomological Magazine, 13: 43-48.

Frith, C.A., J.M. Leis and B. Goldman (1986). Currents in the Lizard Island region of the Great Barrier Reef Lagoon and their relevance to potential movements of larvae. Coral Reefs, 5: 81-92.

Gladstone, W. (1986). Spawning behavior of the bumphead parrotfish Bolbometapon muricatum at Yonge Reef, Great Barrier Reef. Japanese Journal of Ichthyology, 33(3): 326-328.

Holland, N.D., J.R. Strickler and A.B. Leonard (1986). Particle interception, transport and rejection by the feather star Oligometra serripinna (Echinodermata: Crinoidea), studied by frame analysis of videotapes. Marine Biology, 93: 111-126.

Hutchings, P. and C. Glasby (1986). The Polycirrinae (Polychaeta: Terebellidae) from Australia. Records of the Australian Museum, 38: 319-350.

Imajima, M. and H.A. Ten Hove (1986). Serpulinae (Annelida, Polychaeta) from Nauru, the Gilbert Islands (Kiribati) and the Solomon Islands. Proceedings of the Japanese Society of Systematic Zoology, 32: 1-16.

Kojis, B.L. (1986). Sexual reproduction in Acropora (Isopora) (Coelenterata: Scleractinia). II. Latitudinal variation in A. palfifera from the Great Barrier Reef and Papua New Guinea. Marine Biology, 91: 311-318.

Leis, J.M. (1986). Vertical and horizontal distribution of fish larvae near coral reefs at Lizard Island, Great Barrier Reef. Marine Biology, 90: 505-516.

Leis, J.M. (1986). Larval development in four species of Indo-Pacific coral trout Plectropomus (Pisces: Serranidae: Epinephelinae) with an analysis of the relationships of the genus. Bulletin of Marine Science, 38(3): 525-552.

Leis, J.M. (1986). Ecological requirements of Indo-Pacific larval fishes: a neglected zoogeographic factor. Proceedings of the Second International Conference on Indo-Pacific Fishes, 759-766.

Leis, J.M. and S. Bullock (1986). The luminous cardinalfish Siphamia (Pisces, Apogonidae): development of larvae and the luminous organ. Proceedings of the Second International Conference on Indo-Pacific Fishes, 703-714.

Meyer, D.L. and K.B. Meyer (1986). Biostratinomy of recent crinoids (Echinodermata) at Lizard Island, Great Barrier Reef, Australia. Palaios, 1: 294-302.

Newman, L.J. (1986). Snails with clear 'plastic' shells. Australian Shell News, 55: 1-2.

Newman, L.J. (1986). Catching snails that swim. Hawaiian Shell News, Vol. ?: 3.

Olson, R.R. (1986). Light-enhanced growth of the ascidian Didemnum molle/ Prochloron sp. symbiosis. Marine Biology, 93: 437-442.

Poore, G.C.B. and H.M. Lew Ton (1986). New species of Aenigmathura and Pseudanthra (Crustacea: Isopoda: Paranthuridae) from Eastern Australia. Memoirs of the Museum of Victoria, 47(1): 59-73.

Rowe, F.W.E, A.K. Hoggett, R.A. Birtles and L.L. Vail (1986). Revision of some comasterid general from Australia (Echinodermata: Crinoidea), with descriptions of two new genera and nine new species. Zoological Journal of the Linnean Society, 86: 197-277.

Saunders, W.B. (1986). Nautilus in Australia. Australian Shell News, 56: 1-2.

Smith, G.C. and R.C. Buckley (1986). Eagle Island, Great Barrier Reef, Queensland. Corella, 10(3): 81-83.


LIRS publications in 1985: 26

Bellwood, D.R. (1985). The functional morphology, systematics and behavioural ecology of parrotfishes (Family Scaridae). Ph.D. thesis, James Cook University, Australia.

Bowden, B., J. Coll, D. Tapiolas and R. Willis (1985). Some chemical aspects of spawning in alcyonacean corals. Proceedings of the Fifth International Coral Reef Congress, Tahiti, 4: 325-329.

Braley, R.D. (1985). Serotonin-induced spawning in giant clams (Bivalvia:Tridacnidae). Aquaculture, 47: 321-325.

Buckley, R.C. (1985). Distinguishing the effects of area and habitat type on island plant species richness by separating floristic elements and substrate types and controlling for island isolation. Journal of Biogeography, 12: 527-535.

Choat, J.H. and D.R. Bellwood (1985). Interactions amongst herbivorous fishes on a coral reef: influence of spatial variation. Marine Biology, 89: 221-234.

Choat, J.H. and J.E. Randall (1985). A review of the parrotfishes (family Scaridae) of the Great Barrier Reef of Australia with description of a new species. Records of the Australian Museum, 38(4): 175-239.

Dauer, D.M. (1985). A new species of Scolelepis (Polychaeta: Spionidae) from Lizard Island, Australia. Proceedings of the Biological Society of Washington, 98: 678-681.

Fautin, D.G. (1985). Why do amemonefishes inhabit only some host actinians? Proceedings of the Fifth International Coral Reef Congress, Tahiti, 5: 373-377.

Fautin, D.G. (1985). Competition by anemone fishes for host actinians. Proceedings of the Fifth International Coral Reef Congress, Tahiti, 5: 373-377.

Gladstone, W. (1985). Behavioural ecology of the sharpnose pufferfish Canthigaster valentini (Bleeker) at Lizard Island, Great Barrier Reef. Ph.D. thesis, 224 pp + appendices. Macquarie University, Sydney.

Hall, S.J. (1985). Four new species of myodocopine ostracodes (Sarsiellidae) from Lizard Island, North Queensland. Journal of Crustacean Biology, 5(3): 500-522.

Harriott, V.J. (1985). Mortality rates of scleractinian corals before and during a mass bleaching event. Marine Ecology Progress Series, 21: 81-88.

Hutchings P A & L Bamber (1985). Variability of bioerosion rates at Lizard Island, GBR: preliminary attempts to explain these rates and their significance. Proceedings of the Fifth International Coral Reef Congress, Tahiti, 5: 333-338.

Lucas, J.S., W.J. Nash and M. Nishida (1985). Aspects of the evolution of Acanthaster planci(L) (Echinodermata, Asteroidea). Proceedings of the Fifth International Coral Reef Congress, Tahiti, 5: 327-332.

Meyer, D.L. (1985). Evolutionary implications of predation on recent comatulid crinoids from the Great Barrier Reef. Paleobiology, 11(2): 154-164.

Moriarty, D.J.W., D.C. White and T.J. Wassenberg (1985). A convenient method for measuring rates of phospholipid synthesis in seawater and sediments: its relevance to the determination of bacterial productivity and the disturbance artifacts introduced by measurements. Journal of Microbiological Methods, 3: 321-330.

Moriarty, D.J.W., P.C. Pollard and W.G. Hunt (1985). Temporal and spatial variation in bacterial production in the water column over a coral reef. Marine Biology, 85: 285-292.

Moriarty, D.J.W., P.C. Pollard, W.G. Hunt, C.M. Moriarty and T.J. Wassenberg (1985). Productivity of bacteria and microalgae and the effect of grazing by holothurians in sediments on a coral reef flat. Marine Biology, 85: 293-300.

Nichols, P.D. and R.B. Johns (1985). Lipids of the tropical seagrass Thallassia hemprichii. Phytochemistry, 24(1): 81-84.

Oliver, J. (1985). An evaluation of the biological and economic aspects of commercial coral collecting in the Great Barrier Reef region. Report to the Great Barrier Reef Marine Park Authority, 106pp.

Olson, R.R. (1985). The consequences of short-distance larval dispersal in a sessile marine invertebrate. Ecology, 66(1): 30-39.

Smith, G.C. (1985). An analysis of prey remnants from osprey Pandion haliaetus and white-bellied sea-eagle Haliaetus leucogaster feeding roosts. Emu, 85: 198-200.

Stroud, G. (1985). The taxonomy and biology of fishes of the genus Parapercis (Teleostidae: Mugiloididae) in Great Barrier Reef waters. PhD thesis, Macquarie University, Sydney.

Sweatman, H.P.A. (1985). Habitat selection and the influence of resident humbug fishes, Dascyllus aruanus and D. reticulatus on recruitment. PhD thesis, Macquarie University.

Sweatman, H. (1985). The timing of settlement by larval Dascyllus aruanus: some consequences for larval habitat selection. Proceedings of the Fifth International Coral Reef Congress, Tahiti, 5: 367-371.

Sweatman, H.P.A. (1985). The influence of adults of some coral reef fishes on larval recruitment. Ecological Monographs, 55(4): 469-485.


LIRS publications in 1984: 31

Aboussouan, A. and J.M. Leis (1984). Balistoidei: Development. Ontogeny and Systematics of Fishes, Ahlstrom Symposium, La Jolla California, pp. 450-459.

Aldenhoven, J.M. (1984). Social organisation and sex change in an angelfish Centropyge bicolor on the Great Barrier Reef. PhD thesis, Macquarie University, Sydney.

Ben-Eliahu, M.N., P.A. Hutchings and C.J. Glasby (1984). Ceratonereis lizardensis n. sp. (Polychaeta: Nereididae) and Malacoceros indicus (Spionidae) from a mangrove habitat at Lizard Island, North Queensland. Proceedings of the First International Polychaete conference, Sydney, P.A. Hutchings (ed.), pp. 91 - 97. The Linnean Society of New South Wales: Sydney.

Braley, R.D. (1984). Reproduction in the giant clams Tridacna gigas and T. derasa in situ on the north-central Great Barrier Reef, Australia, and Papua New Guinea. Coral Reefs, 3: 221-227.

Buckely, R.C. and H. Harries (1984). Self-sown wild type coconuts from Australia. Biotropica, 16(2): 148-151.

Bull, G. (1984). Planktonic dispersal of larval corals. Report to the Great Barrier Reef Marine Park Authority, 13 pp.

Erseus, C. (1984). Taxonomy and phylogeny of the gutless Phallodrilinae (Oligochaeta, Tubificidae), with descriptions of one new genus and twenty two new species. Zoologica Scripta, 13(4): 239-272.

Fautin, D.G. (1984). Competition by anemonefishes for a preferred host actinian. American Zoologist, 24(3): 543.

Harrison, K. and D.M. Holdich (1984). Hemibranchiate sphaeromatids (Crustacea: Isopoda) from Queensland, Australia, with a world-wide review of the genera discussed. Zoological Journal of the Linnean Society, 81: 275-387.

Hutchings, P.A. (1984). A preliminary report on the spatial and temporal patterns of polychaete recruitment on the Great Barrier Reef. Proceedings of the First International Polychaete Conference Sydney, pp 227-237.

Imajima, M. and H.A. Ten Hove (1984). Serpulinae (Annelida, Polychaeta) from the Truk Islands, Ponape and Majuro Atoll, with some other new Indo-Pacific records. Proceedings of the Japanese Society of Systematic Zoology, 27: 1-66.

Jones, A.R. (1984). Sedimentary relationships and community structure of benthic crustacean assemblages of reef associated sediments at Lizard Island, Great Barrier Reef. Coral Reefs, 3: 101-111.

Jones, A.R. and C. Watson-Russell (1984). A multiple coring system for use with scuba. Hydrobiologia, 109: 211-214.

Kleeman, K.H. (1984). Lithophaga (Bivalvia) from dead coral from the Great Barrier Reef, Australia. Journal of Molluscan Studies, 50: 192-230.

Kleeman, K.H. (1984). Lebensspuren of Upogebia operculata (Crustacea, Decapoda) in Caribbean stone corals (Madreporaria, Anthozoa). Beitrage zur Palaontologie von Osterreich, 11: 35-57.

La Haye, C.A. and N.D. Holland (1984). Electron microscopic studies of the digestive tract and absorption from the gut lumen of a feather star, Oligometra serripinna (Echinodermata). Zoomorphology, 104: 252-259.

La Haye, C.A., N.D. Holland and N. McLean (1984). Electron microscope study of Haplosporidium comatulae n. sp. (Phylum Ascetospora: Class Stellatosporea), a haplosporidian endoparasite of an Australian crinoid, Oligometra serripinna (Phylum Echinodermata). Protistologica, 20(4): 507-515.

Leis, J.M. (1984). Tetraodontoidei : Development. Ontogeny and Systematics of Fishes, Ahlstrom Conference, La Jolla, California, pp. 447-450.

Leis, J.M. (1984). Tetraodontiformes : Relationships. Ontogeny and Systematics of Fishes, Ahlstrom Symposium, La Jolla, California, pp. 459-541.

Leis, J.M. and B. Goldman (1984). A preliminary distributional study of fish larvae near a ribbon coral reef in the Great Barrier Reef. Coral Reefs, 2: 197-203.

Leis, J.M. and W.J. Richards (1984). Acanthuroidei: development and relationships. Ontogeny and Systematics of Fishes, Ahlstrom Symposium, La Jolla, California, pp. 547-551.

Meyer, D.L., C.A. La Haye, N.D. Holland, A.C. Arneson and J.R. Strickler (1984). Time-lapse cinematography of feather stars (Echinodermata: Crinoidea) on the Great Barrier Reef, Australia: demonstrations of posture changes, locomotion, spawning and possible predation by fish. Marine Biology, 78: 179-184.

Moyer, J.T. (1984). Reproductive behavior and social organization of the pomacanthid fish Genicanthus Lamarck at Mactan Island, Philippines. American Society of Ichthyologists and Herpetologists, 1984(1): 194-200.

Olson, R.R. (1984). The life history and larval ecology of the ascidian-algal symbiosis Didemnum molle. PhD thesis, Harvard University, USA.

Richards, W.J. and J.M. Leis (1984). Labroidei: development and relationships. Ontogeny and Systematics of Fishes, Ahlstrom Symposium, La Jolla, California, pp. 542-547.

Schmitt, P.D. (1984). Marking growth increments in otoliths of larval and juvenile fish by immersion in tetracycline to examine the rate of increment formation. Fishery Bulletin, 82(1): 236-242.

Smith, J.D., J. Bagg and B.M. Bycroft (1984). Polycyclic aromatic hydrocarbons in the clam Tridacna maxima from the Great Barrier Reef, Australia. Environ. Sci. Technol., 18(5): 353-358.

Sweatman, H.P.A. (1984). A field study of the predatory behavior and feeding rate of a piscivorous coral reef fish, the lizardfish Synodus englemani. Copeia, 1: 187-194.

Ten Hove, H.A. and M.J. Jansen-Jacobs (1984). A revision of the genus Crucigera (Polychaeta; Serpulidae); a proposed methodical approach to serpulids, with special reference to variation in Serpula and Hydroides. Proceedings of the First International Polychaete Conference, Sydney, pp. 143-180.

Waren, A. (1984). An anatomical description of Eulima bilineata Alder with remarks on and a revision of Pyramidelloides Nevill (Mollusca, Prosobranchia, Eulimidae). Zoologica Scripta, 12(4): 273-294.

Yamaguchi, M. and J.S. Lucas (1984). Natural parthenogenesis, larval and juvenile development, and geographical distribution of the coral reef asteroid Ophidiaster granifer. Marine Biology, 83: 33-42.


LIRS publications in 1983: 39

Barnes, D.J. and C.J. Crossland (1983). Physical, chemical and biological properties of waters over coral reefs at Lizard Island, Great Barrier Reef (Limer II Expedition, Sept 1977). Australian Institute of Marine Science Data Report, Reef Studies Series, 50pp.

Berents, P.B. (1983). The Melitidae of Lizard Island and adjacent reefs, The Great Barrier Reef, Australia (Crustacea: Amphipoda). Records of the Australian Museum, 35: 101-143.

Choat, J.H. (1983). Estimation of the abundances of herbivorous fishes and their grazing rates within reef systems. Proceedings of the Inaugural Great Barrier Reef Conference, Townsville, pp. 171-177.

Church, J.A. and T.J. Golding (1983). Cruises into the western Coral Sea by R.V. `Sprightly' 1980/81: a data report. CSIRO Marine Laboratories Report, 158: 1-33.

Crossland, C.J. (1983). Dissolved nutrients in coral reefs. In "Perspectives on Coral Reefs", D.J. Barnes (Ed.), pp 56-68. Australian Institute of Marine Science, Townsville.

Crossland, C.J. and D.J. Barnes (1983). Dissolved nutrients and organic particulates in water flowing over coral reefs at Lizard Island. Australian Journal of Marine and Freshwater Research, 34: 835-44.

Davies, P.J. and P.A. Hutchings (1983). Initial colonization, erosion and accretion on coral substrate: experimental results, Lizard Island, Great Barrier Reef. Coral Reefs, 2: 27-35.

Dinesen, Z.D. (1983). Shade-dwelling corals of the Great Barrier Reef. Marine Ecology Progress Series, 10: 173-185.

Fisk, D.A. (1983). Free-living corals: distributions according to plant cover, sediments, hydrodynamics, depth and biological factors. Marine Biology, 74: 287-294.

Goldman, B., G. Stroud and F. Talbot (1983). Fish eggs and larvae over a coral reef: abundance with habitat, time of day and moon phase. Proceedings of the Inaugural Great Barrier Reef Conference, Townsville, pp 203-211.

Griffiths, D.J. and T. Luong-Van (1983). Transfer of photosynthetically fixed carbon between the prokaryotic green alga Prochloron and its ascidian host. Australian Journal of Marine and Freshwater Research, 34: 431-40.

Harriott, V.J. (1983). Reproductive seasonality, settlement, and post-settlement mortality of Pocillopora damicornis (Linnaeus), at Lizard Island, Great Barrier Reef. Coral Reefs, 2: 151-157.

Harriott, V.J. (1983). Reproductive ecology of four scleractinian species at Lizard Island, Great Barrier Reef. Coral Reefs, 2: 9-18.

Harriott, V.J. (1983). Reproductive ecology and population dynamics in a scleractinian coral community. PhD thesis, James Cook University, Australia.

Hawkins, C.J., G.A. James, D.L. Parry, J.H. Swinehart and A.L. Wood (1983). Intracellular acidity in the ascidian. Comp. Biochem. Physiol., 76B-3: 559-565.

Holdich, D.M. and K. Harrison (1983). Sphaeromatid isopods (Crustacea) from brackish waters in Queensland, Australia. Zoologica Scripta, 12(2): 127-146.

Hutchings, P. (1983). Bioerosion of coral substrates. Proceedings of the Inaugural Great Barrier Reef Conference, Townsville. pp 113-119. James Cook University Press, Townsville.

Hutchings, P. (1983). Cryptofaunal communities of coral reefs. In "Perspectives on Coral Reefs", D.J. Barnes (Ed.), pp. 200-208, Australian Institute of Marine Science, Townsville.

Kinsey, D.W. (1983). Standards of performance in coral reef primary production and carbon turnover. In "Perspectives on Coral Reefs", D.J. Barnes (Ed.), pp 209-220. Australian Institute of Marine Science, Townsville.

Kornicker, L.S. (1983). Harbansus slatteryi, a new species of myodocopine ostracode from the Great Barrier Reef of Australia (Philomedidae). Proceedings of the Biological Society of Washington, 96(1): 181-188.

Lassig, B.R. (1983). The effects of a cyclonic storm on coral reef assemblages. Environmental Biology of Fishes, 9(1): 55-63.

Leis, J.M. and B. Goldman (1983). Studies on the biology of larval fishes in the Lizard Island area, northern Great Barrier Reef. Proceedings of the Inaugural Great Barrier Reef Conference, Townsville, pp 221-226. James Cook University Press, Townsville.

Leis, J.M. and D.S. Rennis (1983). The larvae of Indo-Pacific coral reef fishes. 269 pp. University NSW Press, Sydney.

Luong-Van, T. and D.J. Griffiths (1983). In vivo absorption spectra for the prokaryotic algal symbionts in a range of didemnid ascidians of the Great Barrier Reef. Phycologia, 22(1): 93-95.

Macurda, D.B. Jr and D.L. Meyer (1983). Sea lilies and feather stars. American Scientist, 71: 354-365.

Nash, W.J. (1983). Population genetics and morphometric studies on the crown of thorns starfish, Acanthaster planci, in the Great Barrier Reef region. M.Sc thesis, James Cook University, Australia.

Olson, R.R. (1983). Ascidian-Prochloron symbiosis: the role of larval photoadaptations in midday larval release and settlement. Biological Bulletin, 165(1): 221-240.

Paxton, H. (1983). Revision of the genus Micronereis (Polychaeta: Nereididae: Notophycinae). Records of the Australian Museum, 35: 1-18.

Robertson, D.R. (1983). On the spawning behavior and spawning cycles of eight surgeonfishes (Acanthuridae) from the Indo-Pacific. Environmental Biology of Fishes, 9(3/4): 193-223.

Russell, B.C. (1983). Checklist of fishes, Great Barrier Reef Marine Park Capricornia Section. Great Barrier Reef Marine Park Authority Special Publication Series, (1) 184pp.

Schwartz, S. (1983). The benefits of being a hermaphrodite. New Scientist, 22 Sep: 848.

Sweatman, H.P.A. (1983). Influence of conspecifics on choice of settlement sites by larvae of two pomacentrid fishes (Dascyllus aruanus and D. reticulatus) on coral reefs. Marine Biology, 75: 225-229.

Taylor, J.D. (1983). The food of coral-reef Drupa (Gastropoda). Zoological Journal of the Linnean Society, 78: 299-316.

Thresher, R.E. and J.T. Moyer (1983). Male success, courtship complexity and patterns of sexual selection in three congeneric species of sexually monochromatic and dichromatic damselfishes (Pisces: Pomacentridae). Animal Behaviour, 31: 113-127.

Walker, T.A. and G.D. Bull (1983). A newly discovered method of reproduction in gorgonian coral. Marine Ecology Progress Series, 12: 137-143.

Wolanski, E. (1983). Water circulation in the central and northern sections of the Great Barrier Reef. Proceedings of the Inaugural Great Barrier Reef Conference, Townsville, pp 467-472.

Wolanski, E. and A.F. Bennett (1983). Continental shelf waves and their influence on the circulation around the Great Barrier Reef. Australian Journal of Marine and Freshwater Research, 34: 23-47.

Wolanski, E. and D. Van Senden (1983). Mixing of Burdekin River flood waters in the Great Barrier Reef. Australian Journal of Marine and Freshwater Research, 34: 49-63.

Wolanski, E. and G.L. Pickard (1983). Upwelling by internal tides and kelvin waves at the continental shelf break on the Great Barrier Reef. Australian Journal of Marine and Freshwater Research, 34: 65-80.


LIRS publications in 1982: 18

Banner, D.M. and A.H. Banner (1982). The alpheid shrimps of Australia, Part III. Records of the Australian Museum, 34(1-2): 1-357.

Buckley, R.C. (1982). Patterns in north Queensland mangrove vegetation. Australian Journal of Ecology, 7: 103-106.

Cheng, L. and P.D. Schmitt (1982). Marine insects of the genera Halobates and Hermatobates (Heteroptera) from neuston tows around Lizard Island, Great Barrier Reef. Australian Journal of Marine and Freshwater Research, 33: 1109-12.

Dinesen, Z.D. (1982). Regional variation in shade-dwelling coral assemblages of the Great Barrier Reef Province. Marine Ecology Progress Series, 7: 117-123.

Harrison, K. and D.M. Holdich (1982). Revision of the genera Dynamenella, Ischyromene, Dynamenopsis, and Cymodocella (Crustacea: Isopoda), including a new genus and five new species of eubranchiate sphaeromatids from Queensland waters. Journal of Crustacean Biology, 2(1): 84-119.

Harrison, K. and D.M. Holdich (1982). New eubranchiate sphaeromatid isopods from Queensland waters. Memoirs of the Queensland Museum, 20(3): 421-446.

Hutchings, P. and A. Murray (1982). Patterns of recruitment of polychaetes to coral substrates at Lizard Island - and experimental approach. Australian Journal Marine and Freshwater Research, 33: 1029-37.

Kensley, B. (1982). Prethura hutchingsae, new genus, new species, an asellote isopod from the Great Barrier Reef, Australia (Crustacea: Isopoda: Pleurocopidae). Journal of Crustacean Biology, 2: 255-260.

Kornicker, L.S. (1982). Alternochelata lizardensis, a new species of myodocopine ostracod from the Great Barrier Reef of Australia (Rutidermatidae). Proceedings of the Biological Society of Washington, 95(4): 793-806.

Lassig, B.R. (1982). Determinants of the structure of small-scale coral patch reef fish assemblages. Phd thesis. Macquarie University, Sydney.

Leis, J.M. (1982). Distribution of fish larvae around Lizard Island, Great Barrier Reef: coral reef lagoon as refuge? Proceedings of the Fourth International Coral Reef Symposium, Manila, 2: 471-477.

Limpus, C.H. (1982). The reptiles of Lizard Island. Herpetofauna, 13(2): 1-6.

Moriarty, D.J.W. (1982). Feeding of Holothuria atra and Stichopus chloronotus on bacteria, organic carbon and organic nitrogen in sediments of the Great Barrier Reef. Australian Journal of Marine and Freswater Research, 33: 255-63.

Moyer, J.T. and Y. Yogo (1982). The Lek-like mating system of Halichoeres melanochir (Pisces:Labridae) at Miyake-jima, Japan. Z. Tierpsychol., 60: 209-226.

Thompson, G.B. and C. Thompson (1982). Movement and size structure in a population of the blue starfish Linckia laevigata (L.) at Lizard Island, Great Barrier Reef. Australian Journal of Marine and Freshwater Research, 33: 561-573.

Veron, J.E.N. and M. Pichon (1982). Scleractinia of Eastern Australia. Part IV Family Poritidae. Australian Institute of Marine Science Monograph Series Volume 5, 159 pp.

Verseveldt, J. and P. Alderslade, 1982. Descriptions of types and other alcyonacean material (Coelenterata: Octocorallia) in the Australian Museum, Sydney. Records of the Australian Museum, 34 (15): 619-647.

Wolanski, E. (1982). Low-level trade winds over the western Coral Sea. American Meteorological Society, 21: 881-882.


LIRS publications in 1981: 27

Bakus, G.J. (1981). Chemical defense mechanisms on the Great Barrier Reef. Science, 211: 497-499.

Benson, A.A. and R.E. Summons (1981). Arsenic accumulation in Great Barrier Reef invertebrates. Science, 211: 482-483.

Buckley, R.C. (1981). Scale-dependent equilibrium in highly heterogeneous islands: plant geography of the northern Great Barrier Reef sand cays and shingle islets. Australian Journal of Ecology, 6: 143-147.

Burdon-Jones, C. and G.R.W. Denton (1981). Metals in marine organisms from the Great Barrier Reef Province. Part 1. Base line survey. Interim Progress Report, James Cook University, Townsville.

Cox, G. and D.M. Dwarte (1981). Freeze-etch ultrastructure of a Prochloron species - the symbiont of Didemnum molle. New Phytol., 88: 427-438.

Grygier, M.J. (1981). Petrarca okadai, a new crustacean (Maxillopoda: Ascothoracida) from the Great Barrier Reef, the first shallow-water record of the genus. Journal of Crustacean Biology, 1(2): 183-189.

Holdich, D.M. and K. Harrison (1981). The sphaeromatid isopod genus Sphaeromopsis Holdich & Jones in African, Australian and South American waters. Crustaceana, 41(3): 286-300.

Hutchings, P.A. (1981). Polychaete recruitment onto dead coral substrates at Lizard Island, Great Barrier Reef, Australia. Bulletin of Marine Science, 31(2): 410-423.

Jones, A.R. (1981). Crustacean community ecology of sublittoral sedimentary areas of Lizard Island, Great Barrier Reef. Bulletin of Marine Science, 31: 809.

Lassig, B.R. (1981). Significance of the epidermal ichthyotoxic secretion of coral-dwelling gobies. Toxicon, 19: 729-735.

Lowry, J.K. (1981). A redescription of Sphaeropthalmus grobbeni Spandl, based on type material from the Red Sea and new material from the Great Barrier Reef (Amphipoda, Dexaminidae). Crustaceana, 41(2): 190-198.

McPherson, G.R. (1981). Investigations of spanish mackerel, Scomberomorus commerson, in Queensland waters. Northern Pelagic Fish Seminar, C.J. Grant and D.G. Walters (eds.), pp 51-58. Australian Public Service, Canberra.

Pichon, M. and J. Morrissey (1981). Benthic zonation and community structure of South Island Reef, Lizard Island (Great Barrier Reef). Bulletin of Marine Science, 31(3): 581-593.

Poore, G.C.B. and B. Kensley (1981). Coralanthura and Sauranthura, two new genera of anthurideans from northeastern Australia (Crustacea: Isopoda: Anthuridae). Proceedings of the Biological Society of Washington, 94(2): 503-513.

Robertson, R. (1981). List of shell-bearing mollusks observed and collected at Lizard Island, Great Barrier Reef, Australia. Tryonia (Miscellaneous Publications of the Department of Malacology of the Academy of Natural Sciences of Philadelphia), 4: 1-32.

Rudman, W.B. (1981). Further studies on the anatomy and ecology of opisthobranch molluscs feeding on the scleractinian coral Porites. Zoological Journal of the Linnean Society, 71(4): 373-412.

Rudman, W.B. (1981). The anatomy and biology of alcyonarian-feeding aeolid opisthobranch molluscs and their development of symbiosis with zooxanthellae. Zoological Journal of the Linnean Society, 72(3): 219-262.

Smith, D.F., D.L. Meyer and S.M.J. Horner (1981). Amino acid uptake by the comatulid crinoid Cenometra bella (Echinodermata) following evisceration. Marine Biology, 61: 207-213.

Summons, R.E. (1981). Occurrence, structure and synthesis of 3-(N-methylamino) glutaric acid, an amino acid from Prochloron didemnii. Phytochemistry, 20(5): 1125-1127.

Summons, R.E. and C.B. Osmond (1981). Nitrogen assimilation in the symbiotic marine alga Gymnodinium microadriaticum: direct analysis of 15N incorporation by GC-MS methods. Phytochemistry, 20(4): 575-578.

Talbot, F.H. and A.J. Gilbert (1981). A comparison of quantitative samples of coral reef fishes latitudinally and longitudinally in the Indo-West Pacific. Proceedings of the Fifth International Coral Reef Symposium, Manilla.

Thompson, R.O.R.Y. and T.J. Golding (1981). Tidally induced 'upwelling' by the Great Barrier Reef. Journal of Geophysical Research, 86(7): 6517-6521.

Tranter, D.J., N.C. Bulleid, R. Campbell, H.W. Higgins, F. Rowe, H.A. Tranter and D.F. Smith (1981). Nocturnal movements of phototactic zooplankton in shallow waters. Marine Biology, 61: 317-326.

Waren, A. (1981). Revision of the genera Apicalia Adams and Stilapex Iredale and description of two new genera (Mollusca, Prosobranchia, Eulimidae). Zoologica Scripta, 10: 133-154.

Wass, R.E. and L.L. Vail (1981). Early growth of bryozoa at Lizard Island, Great Barrier Reef. In, "Recent and Fossil Bryozoa", G.P. Larwood and C. Nielsen (eds.), pp 299-303. Olsen and Olsen, Denmark.

Wolanski, E. (1981). Physical oceanography of the Great Barrier Reef Lagoon. Proceedings of the Conference of Environmental Engineering, Townsville., 5 pp. Institute of Engineers, Australia.

Zmarzly, D.L. and N.D. Holland (1981). Rates of food transport down the ambulacral grooves and through the gut of Comanthus bennetti (Echinodermata:Crinoidea) observed in situ. Marine Ecology Progress Series, 6: 229-230.


LIRS publications in 1980: 17

Berents, P. (1980). The systematics of selected genera of gammarid isopods from Lizard Island and adjacent reefs, the Great Barrier Reef. M.Sc thesis, University of Sydney.

Bishop, D.G. and J.R. Kenrick (1980). Fatty acid composition of symbiotic zooxanthellae in relation to their hosts. Lipids, 15(15): 799-804.

Bishop, D.G., J.R. Kenrick, J.H. Bayston, A.S. Macpherson and S.R. Johns (1980). Monolayer properties of chloroplast lipids. Biochimica et Biophysica Acta, 602: 248-259.

Crossland, C.J. (1980). Release of photosynthetically-derived organic carbon from a hermatypic coral, Acropora cf. acuminata. Endocytobiolgy, Endosymbiosis & Cell Biology, 1: 163-172.

Crossland, C.J., D.J. Barnes, T. Cox and M. Devereux (1980). Compartmentation and turnover of organic carbon in the staghorn coral Acropora formosa. Marine Biology, 59: 181-187.

Dinesen, Z.D. (1980). A revision of the coral genus Leptoseris (Scleractinia: Fungiina: Agariciidae). Memoirs of the Queensland Museum, 20(1): 181-235.

Dinesen, Z.D. (1980). Some ecological aspects of coral assemblages in the Great Barrier Reef. PhD thesis, James Cook University, Australia.

Dunn, D.F. and W.M. Hamner (1980). Amplexidiscus fenestrafer n. gen., n. sp. (Coelenterata: Anthozoa), a tropical Indo-Pacific corallimorpharian. Micronesica, 16(1): 29-36.

Hamner, W.M. and D.F. Dunn (1980). Tropical corallimorpharia (Coelenterata: Anthozoa): feeding by envelopment. Micronesica, 16(1): 37-41.

Holdich, D.M. and K. Harrison (1980). The crustacean isopod genus Gnathia Leach from Queensland waters with descriptions of nine new species. Australian Journal of Marine and Freshwater Research, 31(2): 215-240.

Holdich, D.M. and K. Harrison (1980). The isopod genus Dynamene from Australian waters, with description of a new species from coral reefs. Memoirs of the Queensland Museum, 20(1): 163-70.

Kleeman, K.H. (1980). Boring bivalves and their host corals from the Great Barrier Reef. Journal of Molluscan Studies, 46: 13-54.

Kleeman, K.H. (1980). Coral-boring bivalve unchanged since Middle Liassic. Beitrage zur Palaontologie von Osterreich, 7: 239-249.

Lubbock, R. (1980). Five new basslets of the genus Pseudochromis (Teleostei: Pseudochromidae) from the Indo-Australian archipelago. Revue suisse Zool., 87(3): 821-834.

Mountseer, D.G. (1980). Energy and the built environment in relation to buildings in remote, tropical coastal areas in Australia. MSc thesis, 155 pp. Macquarie University, Sydney,

Preobrazhensky, B.V. (1980). Morphogenesis in corals: methodological aspect. Acta Palaeontologica Polonica, 25(3-4): 473-476.

Robertson, R. (1980). Epitonium millecostatum and Coralliophila clathrata: two prosobranch gastropods symbiotic with Indo-Pacific Palythoa (Coelenterata:Zoanthidae). Pacific Science, 34(1): 1-17.


LIRS publications in 1979: 14

Greenwood, J.G. and B.H.R. Othman (1979). Description of Labidocera farrani sp. nov., a pontellid copepod known from eastern and northern Australian waters (Crustacea, Copepoda). Journal of Plankton Research, 1: 231-239.

Hamner, W.M. and J.H. Carleton (1979). Copepod swarms: attributes and role in coral reef ecosystems. Limnology and Oceaonography, 24(1): 1-14.

Harvey, N., P.J. Davies and J.F. Marshall (1979). Seismic refraction - a tool for studying coral reef growth. BMR Journal of Australian Geology & Geophysics, 4: 141-147.

Hutchings, P.A. and P.B. Weate (1979). Experimental recruitment of endo-cryptolithic communities at Lizard Island, Great Barrier Reef: preliminary results. Proceedings of the International Symposium on Marine Biogeography and Evolution in the Southern Hemisphere. Auckland NZDSIR Infomation Series, 137: 239-256.

Kinsey, D.W. (1979). Carbon turnover and accumulation by coral reefs. PhD thesis, University of Hawaii, USA.

Kinsey, D.W. and P.J. Davies (1979). Carbon turnover, calcification and growth in coral reefs. In "Biogeochemical cycling of mineral forming elements", P.A. Trudinger and D.J. Swaine (eds.), pp 131-162. Elsevier Press.

Meyer, D.L. (1979). Length and spacing of the tube feet in crinoids (Echinodermata) and their role in suspension-feeding. Marine Biology, 51: 361-369.

Moriarty, D.J.W. (1979). Biomass of suspended bacteria over coral reefs. Marine Biology, 53: 193-200.

Morton, B. (1979). The biology and functional morphology of the coral sand bivalve Fimbria fimbriata (Linneus, 1758). Records of the Australian Museum, 32: 389-420.

Russell, B.C. and R.F. Cressey (1979). Three new species of Indo-west Pacific lizardfish (Synodontidae). Proceedings of the Biological Society of Washington, 92(1): 166-175.

Smith, B.J. (1979). Notes on two species of rhytidid snails from Lizard Island, North Queensland. Records of the Australian Museum, 32(12): 421-434.

Steene, R. (1979). Stallions of the sea. Australian Natural History, 19(12): 398-407.

Veron J.E.N. and M. Pichon (1979). Scleractinia of eastern Australia. Part III. Families Agariciidae, Siderastreidae, Fungiidae, Oculinidae, Merlunidae, Mussidae, Pectinidae, Caryophylliidae, Dendrophylliidae. Australian Institute of Marine Science, Townsville Monograph Series Vol 4.

Wilson, B.R. (1979). A revision of Queensland lithophagine mussels (Bivalvia, Mytilidae, Lithophaginae). Records of the Australian Museum, 32(13): 435-489.


LIRS publications in 1978: 12

Beaton, J.M. (1978). Archaeology and the Great Barrier Reef. Philosophical Transactions of the Royal Society, London, B, 284: 141-147.

Chace, F.A. Jnr. and D.E. Brown (1978). A new polychelate shrimp from the Great Barrier Reef of Australia and its bearing on the family Bresiliidae (Crustacea: Decapoda: Caridea). Proceedings of the Biological Society of Washington, 91(3): 756-766.

Frankel, E. (1978). Evidence from the Great Barrier Reef of ancient Acanthaster aggregations. Atoll Research Bulletin, 220: 75-93.

Harvey, N., P.J. Isdale and D.G. Backshall (1978). Reefs and islands of the Great Barrier Reef between 14oS and 17oS. GBRMPA Report Status MPA, 57: 1-11.

Hoese, D.F. and P. Fourmanoir (1978). Discordipinna griessingeri, a new genus and species of gobiid fish from the tropical Indo-west Pacific. Japanese Journal of Ichthyology, 25(1): 19-24.

Hutchings, P.A. (1978) The hidden fauna of coral reefs. Oceans, 1: 160-163.

Hutchings, P.A. and P.B. Weate (1978). Comments on the technique of acid dissolution of coral rock to extract endo-cryptolithic fauna. The Australian Zoologist, 19(3): 314-320.

Kinsey, D.W. (1978). Alkalinity changes and coral reef calcification. Limnology and Oceanography, 23(5): 989-991.

Kleeman, K.H. (1978). Mit den Taylors auf Lizard Island. Submarin, 78(1): 40-42.

Olafson, R.W. (1978). Effect of agricultural activity on levels of organochlorine pesticides in hard corals, fish and molluscs from the Great Barrier Reef. Marine Environmental Research, 1: 87-107.

Steene, R. (1978). Butterfly and Angelfishes of the World. A.H. and A.W. Reed, Sydney.

Webb, K.L. and W.J. Wiebe (1978). The kinetics and possible significance of nitrate uptake by several algal-invertebrate symbioses. Marine Biology, 47: 21-27.


LIRS publications in 1977: 22

Aldredge, A.L. and J.M. King (1977). Distribution, abundance and substrate preference of demersal zooplankton at Lizard Island lagoon, Great Barrier Reef. Marine Biology, 41: 317-333.

Byrnes, N.B., S.L. Everist, S.T. Reynolds, A. Specht and R.L. Specht (1977). The vegetation of Lizard Island, North Queensland. Proceedings of the Royal Society of Queensland, 88: 1-15.

Davies P.J. et al (1977). Reef Development - Great Barrier Reef. Proceedings of the Third International Coral Reef Symposium, Florida, 2: 331-337.

Domm, S. (1977). Sea birds and waders of the Lizard Island area. The Sunbird, 8: 1-8.

Ehrlich, P.R., F.H. Talbot, B.C. Russell and G.R.V. Anderson (1977). The behaviour of Chaetodontid fishes with special reference to Lorenz's "poster colouration" hypothesis. Journal of Zoology, London, 183: 213-228.

Harvey, N. (1977). The identification of subsurface solution disconformities on the Great Barrier Reef, Australia, between 14oS and 17oS, using shallow seismic refraction techniques. Proceedings of the Third International Coral Reef Symposium, Florida, pp 45-51.

Harvey, N. (1977). Application of shallow seismic refraction techniques to coastal geomorphology: a coral reef example. Catena, 4: 333-339.

Hoese, D.F. and G.R. Allen (1977). Signogobius biocellatus, a new genus and species of sand-dwelling coral reef gobiid fish from the western tropical Pacific. Japanese Journal of Ichthyology, 23(4): 199-207.

Hopley, D. (1977). The age of the outer ribbon reef surface, Great Barrier Reef, Australia: Implications for hydro-isostatic models. Proceedings of the Third International Coral Reef Symposium, Florida, pp 23-28.

Hudson, R.C.L. (1977). Preliminary observations on the behaviour of the gobiid fish Signigobius biocellatus Hoese and Allen, with particular reference to its burrowing behaviour. Z. Tierpsycol., 43: 214-220.

Hutchings, P. (1977). Opportunists in hiding. Australian Natural History, 199(3): 86-89.

Hutchings, P. and P.B. Weate (1977). Distribution and abundance of cryptofauna from Lizard Island, Great Barrier Reef. Marine Research in Indonesia, 17: 99-112.

Kinsey, D.W. (1977). Seasonality and zonation in coral reef productivity and calcification. Proceedings of the Third International Coral Reef Symposium, Florida, pp. 383-388.

Kleeman, K.H. (1977). A new species of Lithophaga (Bivalvia) from the great Barrier Reef, Australia. The Veliger, 20(2): 151-154.

Lubbock, R. and N.V.C. Polunin (1977). Notes on the Indo-West Pacific genus Ctenogobiops (Teleostei: Gobiidae), with descriptions of three new species. Revue suisse Zool., 84(2): 505-514.

Meyer, D.L. and D.B. Macurda Jr. (1977). Adaptive radiation of the comatulid crinoids. Paleobiology, 3: 74-82.

Pichon, M. (1977). Comparative analysis of coral reef community structures in the vicinity of Lizard Island, Australia. National Geographic Society Research Reports, 1976: 711-719.

Ponder, W.F. and E.K. Yoo (1977). A revision of the Australian species of the Rissoellidae (Mollusca: Gastropoda). Records of the Australian Museum, 31(4): 133-185.

Ponder, W.F. and E.K. Yoo (1977). A Revision of the Eatoniellidae of Australia (Mollusca, Gastropoda, Littorinacea). Records of the Australian Museum, 31(15): 606-658.

Scott, B.D. and H.R. Jitts (1977). Photosynthesis of phytoplankton and zooxanthellae on a coral reef. Marine Biology, 41: 307-315.

Smith, D.F. and W.J. Wiebe (1977). Rates of carbon fixation, organic carbon release and translocation in a reef-building foraminifer, Marginopora vertebralis. Australian Journal of Marine and Freshwater Research, 28: 311-19.

Veron, J.E.N., M. Pichon, and M.W. Best (1977). Scleractinia of eastern Australia. Part II Families Faviidae, Trachyphylliidae. Australian Institute of Marine Science, Townsville, Monograph series 3.


LIRS publications in 1976: 12

Barnes D.J., J. Caperon, T.J. Cox, C.J. Crossland, P.J. Davies, M. Devereaux, W.M. Hamner, H.R. Jitts, B.E. Kinsey, D.W. Kinsey, G.A. Knauer, J.A. Lundgren, R. Olafson, G.W. Skyring, D.F. Smith, K.L. Webb, and W.J. Wiebe (1976). Metabolic processes of coral reef communities at Lizard Island, Queensland. Search, 7: 463-468.

Burgess, W.E. and H.R. Axelrod (1976). Fishes of the Great Barrier Reef. Pacific Marine Fishes Book 7. TFH Publications: New York.

Coleman, N. (1976). Aerial respiration of nerites from the north-east coast of Australia. Australian Journal of Marine and Freshwater Research, 27: 455-66.

Davies, P.J. and K Martin (1976). Radial aragonite ooids, Lizard Island, Great Barrier Reef, Queensland Australia. Geology, 4(2): 120-122.

Domm, S.B. and W. Deas (1976). Corals of the Great Barrier Reef. Ure Smith, Sydney.

Ponder, W.F. and E.K. Yoo (1976). A revision of the Australian and tropical Indo-Pacific tertiary and recent species of Pisinna (=Estea) (Mollusca: Gastropoda: Rissoidae). Records of the Australian Museum, 30(10): 150-249.

Price, I.R., A.W.D. Larkum and A. Bailey (1976). Checklist of marine benthic plants collected in the Lizard Island area. Australian Journal of Plant Physiology, 3: 3-8.

Russell, B.C., G.R. Allen and H.R. Lubbock (1976). New cases of mimicry in marine fishes. Journal of Zoology, London, 180: 407-423.

Skyring, G.W. and L.A. Chambers (1976). Biological sulphate reduction in carbonate sediments of a coral reef. Australian Journal of Marine and Freshwater Research, 27: 595-602.

Smith, S.V. and D.W. Kinsey (1976). Calcium carbonate production, coral reef growth, and sea level change. Science, 194: 937-939.

Tolbert, N.E. and C.B. Osmond (1976). The Great Barrier Reef photorespiration expedition: Introduction. Australian Journal of Plant Physiology, 3: 1-2.

Veron, J.E.N. and M. Pichon (1976). Scleractinia of eastern Australia. Part I. Families Thamnasteriidae, Astrocoeniidae, Pocilloporidae. Australian Institute of Marine Science Monograph Series, Volume 3, 86pp.


LIRS publications in 1975: 1

Kinsey, D.W. and P.J. Davies (1975). Coral reef growth - a model based on morphological and metabolic studies. Australian Journal of Marine Science, 7: (abstract only).