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The following papers published in 2001 have used specimens from the Australian Museum fish collection.

  1. Böhlke, E.B. & J.E. McCosker. 2001. The moray eels of Australia and New Zealand, with the description of two new species (Anguilliformes: Muraenidae). Rec. Aust. Mus. 53(1): 71-102.
  2. Carpenter, K.E. & G.D. Johnson. 2001. A Pylogeny of sparoid fishes (Perciformes, Percoidei) based on morphology. Ichthyol. Res. 49: 114-127.
  3. Clarke, T.A. 2001. Pelagic Fishes of the Genus Eustomias, Subgenus Dinematochirus (Stomiidae), in the Indo-Pacific with Description of Twelve New Species. Copeia. 3: 683-699.
  4. Colborn, J., Crabtree, R.E., Shaklee, J.B., Pfieler, E. & B.W. Bowen. 2001. The evolutionary enigma of bonefishes (Albula spp.): cryptic species and ancient separations in a globally distributed shorefish. Evolution 55(4): 807-820.
  5. Fukui, A. 2001. Larva of Chascanopsetta lugubris lugubris (Bothidae) disgorged by lancetfish (Alepisaurus sp.). Ichthyol. Res. 48:100-103.
  6. Gill, A.C. & R. Fricke. 2001. Revision of the western Indian Ocean fish subfamily Anisochrominae (Perciformes, Pseudochromidae). Bulletin of the Natural History Museum, London, Zoology Series 67(2): 191-207.
  7. Guibord, A. & F. Chapleau. 2001. Poecilopsetta dorsialta: A New Species of Poecilopsettidae (Pleuronectidae) from the Pacific Ocean. Copeia 4: 1081-1086.
  8. Hoese, D.F. & S. Reader. 2001. Revision of the eastern Pacific species of Gobulus (Perciformes: Gobiidae), with description of a new species. Rev. Biol. Trop. 49(Suppl. 1): 169-176.
  9. Hoshino, K. 2001. Homologies of the caudal fin rays of Pleuronectiformes (Teleostei). Ichthyol. Res. 48: 231-246.
  10. Hoshino, K. 2001. Monophyly of the Citharidae (Pleuronectoidei: Pleuronectiformes: Teleostei) with considerations of pleuronectoid phylogeny. Ichthyol. Res. 48: 391-404.
  11. Iwata, A., Hosoya, S. & H.K. Larson. 2001. Paedogobius kimurai, a new genus and species of Gobiidae from the West Pacific. Records of the Australian Museum. 53: 103-112.
  12. Iwatsuki, Y. & P.C. Heemstra. 2001. A New Species of Gerreid Fish (Teleostei: Perciformes: Gerreidae) from India, with Comments on Gerres poieti and the Gerres erythrourus Complex. Copeia. 4: 1043-1049.
  13. Iwatsuki, Y., Kimura, S. & T. Yoshino. 2001. Redescription of Gerres longirostris (Lacepede, 1801) and Gerres oblongus Cuvier in Cuvier and Valenciennes, 1830, included in the Gerres longirostris Complex (Perciformes:Gerreidae). Copeia 4: 954-956.
  14. Johnson, J.W., Randall, J.E. & S. Chenoweth. 2001. Description of Diagramma melanacrum, a new species of haemulid fish from Indonesia, Borneo and the Philippines, with a generic review. Memoirs of the Queensland Museum 46(2): 657-676.
  15. Kim, B-J. & Amaoka, K. 2001. A new species, Parupeneus procerigena, from the Saya de Malha Bank in the western Indian Ocean (Perciformes: Mullidae). Icthyol. Res. 48: 45-50.
  16. Kimura, S., Iwatsuki, Y. & T. Yoshino. 2001. Redescriptions of the Indo-West Pacific atherinid fishes, Atherinomorus endrachtensis (Quoy and Gaimard, 1825) and A. duodecimalis (Valenciennes in Cuvier and Valenciennes, 1835). Icthyol. Res. 48(4): 167-177.
  17. Kimura, S., Iwatsuki, Y. & T. Yoshino. 2001. Validity of the atherinid fish Atherinomorus vaigiensis (Quoy and Gaimard, 1825) with comments on its synonymy. Icthyol. Res. 48: 379-384.
  18. Kuiter, R H. 2001. Revision of the Australian seahorses of the genus Hippocampus (Syngnathiformes: Syngnathidae) with descriptions of nine new species. Rec. Aust. Mus. 53(3): 293-340.
  19. Larson, H.K. 2001. A revision of the gobiid fish genus Mugilogobius (Teleostei: Gobioidei), with discussion of its systematic placement. Records of the Western Australian Museum, Supplement No. 62: 1-233.
  20. Larson, H.K & D.F. Hoese. 2001. A new genus of small gobiid fish (Teleostei, Gobiidae) from the Indo-west Pacific with description of two new species. The Beagle, Records of the Museum & Art Gallery of the Northern Territory. 17:27-36.
  21. McCosker, J.E. & J.E. Randall. 2001. Revision of the snake-eel genus Brachysomophis (Anguilliformes: Ophichthidae) with description of two new species and comments on the species of Mystriophis. Indo-Pacific Fishes 33: 1-32.
  22. McGrouther, M.A. 2001.First record of the Large-tooth Cookie-Cutter Shark, Isistius plutodus from Australian waters. Memoirs of the Queensland Museum 46(2): 442.
  23. McGrouther, M.A. 2001.First record of Elsman's Whipnose Anglerfish, Gigantactis elsmani (Lophiformes: Gigantactinidae) from Australian waters. Memoirs of the Queensland Museum 46(2): 646.
  24. Motomura, H., & Y. Iwatsuki. 2001. A new genus, Leptomelanosoma, for the polynemid fish previously known as Polydactylus indicus (Shaw, 1804) and a redescription of the species. Icthyol. Res., 48: 13-21.
  25. Motomura, H., & Y. Iwatsuki. 2001. Review of Polydactylus species (Perciformes: Polynemidae) characterised by a large black anterior lateral line spot, with description of two new species. Icthyol. Res., 48: 337-354.
  26. Motomura, H., Iwatsuki, Y. & S. Kimura. 2001. A poorly known polynemid fish, Polynemus astrolabi Sauvage, 1881, a junior synonym of Galeoides decadactylus (Bloch,1795). Icthyol. Res., 48(4): 197-202.
  27. Motomura, H., Iwatsuki, Y. & S. Kimura. 2001. Redescription of Polydactylus sexfilis (Valenciennes in Cuvier and Valenciennes, 1831), a senior synonym of P.kuru (Bleeker,1853) with designation of a lectotype (Perciformes: Polynemidae). Icthyol. Res. 48: 83-89.
  28. Motomura, H., Iwatsuki, Y. & T. Yoshino. 2001. A new species, Polydactylus siamensis, from Thailand and redescription of P.plebius (Broussonet, 1782) with designation of a neotype (Perciformes: Polynemidae). Icthyol. Res. 48(4): 117-126.
  29. Motomura, H., Kimura, S. & Y. Iwatsuki, 2001. Polydactylus bifurcus, a new species of threadfin from Lombok Island, Indonesia (Perciformes: Polynemidae). Ich. Research. 48:299-305.
  30. Motomura, H., Senou, H. & Y. Iwatsuki. 2001. A record of a threadfin, Eleutheronema tetradactylum, from Aomori Prefecture, northen Japan, and description of a newly-recognised diagnostic character of the species (Perciformes: Polynemidae). Japan. J. Ichthyol. 48 (1): 41-47.
  31. Motomura, H., Sheshagiri Rao, B.V. Ratnamala, B. & Y. Iwatsuki. 2001. Polydactylus konadaensis Mishra and Krishnan, 1993, a junior synonym of Filimanus xanthonema (Valenciennes in Cuvier and Valenciennes, 1831)(Perciformes: Polynemidae). Icthyol. Res. 48(4): 203-206.
  32. Murdy, E.O. & K. Shibukawa. 2001. A revision of the gobiid fish genus Odontamblyopus (Gobiidae: Amblyopinae). Icthyol. Res. 48: 31-43.
  33. Ng, H.H. & J. Freyhof. 2001. A review of the catfish genus Pterocryptis (Siluridae) in Vietnam, with the description of two new species. Journal of Fish Biology. 59: 624-644.
  34. Okamoto, M. & H. Ida, 2001. Description of a postflexion larva specimen of Liopropoma japonicum from off Izu Peninsula, J. Japan. Ichthyological Research. 48: 97-99.
  35. Parmentier, E., Vandewalle, P. & F. Lagardere. 2001. Morpho-anatomy of the otic region in carapid fishes: eco-morphological study of their otoliths. J. Fish Biology. 58: 1046-1061.
  36. Paxton, J.R., Johnson G.D. & T. Trnski. 2001. Larvae and juveniles of the deepsea 'whalefishes' Barbourisia and Rondeletia (Stephanoberyciformes: Barbourisiidae, Rondeletiidae) with comments on family relationships. Records of the Australian Museum. 53(3): 407-425.
  37. Randall, J.E. 2001. Prionurus chrysurus, a new species of surgeonfish (Acanthuridae) from cool upwelled seas of southern Indonesia. J. South Asian Nat. Hist. 5(2):159-165.
  38. Randall, J. 2001. Four New Damselfishes (Perciformes: Pomacentridae) from the Marquesas Islands. Copeia. 1:92-107.
  39. Randall, J.E. & K.D. Clements. 2001. Second revision of the surgeonfish genus Ctenochaetus (Perciformes: Acanthuridae), with descriptions of two new species. Indo-Pacic. Fishes. 32: 1-33.
  40. Randall, J.E. & W.N. Eschmeyer. 2001. Revision of the indo-pacific Scorpionfish genus Scorpaenopsis, with descriptions of eight new species. Indo-Pacific Fishes. 34: 79.
  41. Randall J.E. & D.W. Greenfield. 2001. A preliminarey review of the Indo-Pacific gobiid fishes of the genus Gnatholepis. Ichth. Bull. J.L.B. Smith Insitiute of Ichyology. 69: 1-17.
  42. Randall, J.E. & R.L. Pyle. 2001. Three New Species of Labrid Fishes of the Genus Cirrhilabrus from Islands of the Tropical Pacific. Aqua. 4 (3): 89-98.
  43. Randall, J.E & H.A. Randall. 2001. Dascyllus auripinnis, a New Pomacentrid Fish from Atolls of the Central Pacific Ocean. Zoological Studies: 40(1): 61-67.
  44. Sazonov, Y.I. 2001. Notophycis - A New Fish Genus of the Family Moridae (Gadiformes) with the Description of a New Species and Two New Subspecies and Notes on the Status of the Genus Austrophycis. Voprosy Ikhtiologii. 41(3): 293-303.
  45. Sazanov, Y.I. & A. Williams. 2001. A Review of the Alepocephalid Fishes (Argentiniformes, Alepocephalidae) from the Continental Slope of Australia: Part 1. Journal of Ichthyology. (41): S1-S36.
  46. Springer, V.G. & G.R. Allen. 2001. Ecsenius ops, from Indonesia, and E. tricolor, from Western Philippines and north-western Kalimantan, New Species of Blennid fishes in the Stigmatura Species Group. Aqua 4(4):151-158.
  47. Stein, D., Chernova, N.V.& A.P. Andriashev. 2001. Snailfishes (Pisces: Liparidae) of Australia, Including descriptions of Thirty new species. Records of the Australian Museum. 53: 341-406. Table 1 & Figure 17.
  48. Tang, K.L. 2001. Phylogenetic Relationships among Damselfishes (Teleostei: Pomacentridae) as Determined by Mitochondrial DNA Data. Copeia. 3: 591-601.
  49. Trnski, T. 2001. Diel and tidal abundance of fish larvae in a barrier-estuary channel in New South Wales. J. Mar. Freshwater Res. 52: 995-1006.
  50. Watson, W. 2001. Larvae of Enchelyurus ater (Gunther, 1877) and E. kraussi (Klunzinger, 1871) (Pisces: Blenniidae: Omobranchini). Records of the Australian Museum. 53(1): 57-70.
  51. Winterbottom, R. 2001. Two new species of Trimma (Gobiidae) from the central,western, and south Pacific. Aqua. 5(2): 45-52.
  52. Yamanoue, Y. & K. Matsuura. 2001. Descriptions of two new Acropomatid species of the genus Malakichthys (teleostei: perciformes) from Australia. Bulletin of Marine Science. 69(3): 1139-1147.
  53. Yamanoue, Y. & K. Yoseda. 2001. A new species of the genus Malakichthys (Perciformes: Acropomatidae) from Japan. Ich. Research. 48: 257-261.
  54. Yamashita, T. & S. Kimura. 2001. A new species, Gazza squamiventralis, from the East Coast of Africa (Perciformes: Leiognathidae). Ich. Res. 48:161-166.